RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 PRR20CP86479 221 aa9.3□□□□□ -0.92
VPS26A-208ENST00000497022 PRR20DP86480 221 aa9.3□□□□□ -0.92
VPS26A-208ENST00000497022 PRR20BP86481 221 aa9.3□□□□□ -0.92
VPS26A-208ENST00000497022 PRR20AP86496 221 aa9.3□□□□□ -0.92
VPS26A-208ENST00000497022 DGAT1O75907 488 aa9.29□□□□□ -0.92
VPS26A-208ENST00000497022 DNAJB2P25686 324 aa9.29□□□□□ -0.92
VPS26A-208ENST00000497022 BLOC1S3Q6QNY0 202 aa9.29□□□□□ -0.92
VPS26A-208ENST00000497022 ANKLE1Q8NAG6 615 aa9.29□□□□□ -0.92
VPS26A-208ENST00000497022 ZNF775Q96BV0 537 aaPredicted RBP9.29□□□□□ -0.92
VPS26A-208ENST00000497022 SPRYD7Q5W111 196 aa9.28□□□□□ -0.92
VPS26A-208ENST00000497022 PKDCCQ504Y2 493 aa9.27□□□□□ -0.93
VPS26A-208ENST00000497022 ZNF598Q86UK7 904 aaKnown RBP9.27□□□□□ -0.93
VPS26A-208ENST00000497022 KMT5BQ4FZB7 885 aa9.26□□□□□ -0.93
VPS26A-208ENST00000497022 EMID1Q96A84 441 aaPredicted RBP9.26□□□□□ -0.93
VPS26A-208ENST00000497022 TMEM134Q9H6X4 195 aa9.26□□□□□ -0.93
VPS26A-208ENST00000497022 ACTN4O43707 911 aaKnown RBP9.25□□□□□ -0.93
VPS26A-208ENST00000497022 MYT1Q01538 1121 aa9.25□□□□□ -0.93
VPS26A-208ENST00000497022 RBM46Q8TBY0 533 aaKnown RBP9.25□□□□□ -0.93
VPS26A-208ENST00000497022 TLL1O43897 1013 aa9.24□□□□□ -0.93
VPS26A-208ENST00000497022 PTGDRQ13258 359 aa9.23□□□□□ -0.93
VPS26A-208ENST00000497022 S1PR4O95977 384 aa9.21□□□□□ -0.94
VPS26A-208ENST00000497022 ADH1BP00325 375 aa9.21□□□□□ -0.94
VPS26A-208ENST00000497022 ZNF697Q5TEC3 545 aa9.21□□□□□ -0.94
VPS26A-208ENST00000497022 ARHGEF1Q92888 912 aaKnown RBP9.21□□□□□ -0.94
VPS26A-208ENST00000497022 ADGRG1Q9Y653 693 aa9.21□□□□□ -0.94
VPS26A-208ENST00000497022 CFHP08603 1231 aa9.2□□□□□ -0.94
VPS26A-208ENST00000497022 LIAT1Q6ZQX7 453 aa9.2□□□□□ -0.94
VPS26A-208ENST00000497022 GDF9O60383 454 aa9.19□□□□□ -0.94
VPS26A-208ENST00000497022 NR1I2O75469 434 aa9.19□□□□□ -0.94
VPS26A-208ENST00000497022 RCCD1A6NED2 376 aa9.18□□□□□ -0.94
VPS26A-208ENST00000497022 MLLT3P42568 568 aaPredicted RBP9.18□□□□□ -0.94
VPS26A-208ENST00000497022 TSHZ2Q9NRE2 1034 aa9.18□□□□□ -0.94
VPS26A-208ENST00000497022 FAM187AA6NFU0 413 aa9.17□□□□□ -0.94
VPS26A-208ENST00000497022 PPEF1O14829 653 aaPredicted RBP9.17□□□□□ -0.94
VPS26A-208ENST00000497022 LMOD2Q6P5Q4 547 aa9.17□□□□□ -0.94
VPS26A-208ENST00000497022 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.16□□□□□ -0.94
VPS26A-208ENST00000497022 SLC6A16Q9GZN6 736 aa9.16□□□□□ -0.94
VPS26A-208ENST00000497022 PLCB2Q00722 1185 aa9.15□□□□□ -0.94
VPS26A-208ENST00000497022 TNFRSF10AO00220 468 aa9.14□□□□□ -0.95
VPS26A-208ENST00000497022 SLC10A3P09131 477 aa9.14□□□□□ -0.95
VPS26A-208ENST00000497022 POTECB2RU33 542 aa9.13□□□□□ -0.95
VPS26A-208ENST00000497022 FCHSD2O94868 740 aa9.11□□□□□ -0.95
VPS26A-208ENST00000497022 PLA2G2CQ5R387 149 aa9.11□□□□□ -0.95
VPS26A-208ENST00000497022 RSPH4AQ5TD94 716 aa9.11□□□□□ -0.95
VPS26A-208ENST00000497022 KCNV2Q8TDN2 545 aa9.11□□□□□ -0.95
VPS26A-208ENST00000497022 AAASQ9NRG9 546 aa9.11□□□□□ -0.95
VPS26A-208ENST00000497022 NUTM2FA1L443 756 aa9.1□□□□□ -0.95
VPS26A-208ENST00000497022 OATP04181 439 aa9.1□□□□□ -0.95
VPS26A-208ENST00000497022 SCUBE3Q8IX30 993 aa9.1□□□□□ -0.95
VPS26A-208ENST00000497022 CRIPAKQ8N1N5 446 aa9.1□□□□□ -0.95
VPS26A-208ENST00000497022 RPIAP49247 311 aa9.09□□□□□ -0.95
VPS26A-208ENST00000497022 TREML4Q6UXN2 200 aa9.09□□□□□ -0.95
VPS26A-208ENST00000497022 FAM161AQ3B820 660 aa9.08□□□□□ -0.96
VPS26A-208ENST00000497022 PXYLP1Q8TE99 480 aa9.08□□□□□ -0.96
VPS26A-208ENST00000497022 SPSB2Q99619 263 aa9.08□□□□□ -0.96
VPS26A-208ENST00000497022 PKD2L1Q9P0L9 805 aa9.08□□□□□ -0.96
VPS26A-208ENST00000497022 ST8SIA5O15466 376 aa9.07□□□□□ -0.96
VPS26A-208ENST00000497022 LCE2AQ5TA79 106 aaPredicted RBP9.07□□□□□ -0.96
VPS26A-208ENST00000497022 AVPP01185 164 aa9.05□□□□□ -0.96
VPS26A-208ENST00000497022 FOXC1Q12948 553 aa9.04□□□□□ -0.96
VPS26A-208ENST00000497022 CTC1Q2NKJ3 1217 aa9.03□□□□□ -0.96
VPS26A-208ENST00000497022 PUS10Q3MIT2 529 aaKnown RBP9.03□□□□□ -0.96
VPS26A-208ENST00000497022 METTL3Q86U44 580 aaKnown RBP9.03□□□□□ -0.96
VPS26A-208ENST00000497022 P3H3Q8IVL6 736 aa9.03□□□□□ -0.96
VPS26A-208ENST00000497022 TOR4AQ9NXH8 423 aa9.03□□□□□ -0.96
VPS26A-208ENST00000497022 CD2BP2O95400 341 aaKnown RBP9.02□□□□□ -0.97
VPS26A-208ENST00000497022 HIC1Q14526 733 aa9.02□□□□□ -0.97
VPS26A-208ENST00000497022 SMCPP49901 116 aaPredicted RBP9□□□□□ -0.97
VPS26A-208ENST00000497022 HAP1P54257 671 aaPredicted RBP9□□□□□ -0.97
VPS26A-208ENST00000497022 MORN1Q5T089 497 aa9□□□□□ -0.97
VPS26A-208ENST00000497022 CYP4X1Q8N118 509 aa9□□□□□ -0.97
VPS26A-208ENST00000497022 THAP11Q96EK4 314 aa9□□□□□ -0.97
VPS26A-208ENST00000497022 FCF1Q9Y324 198 aaKnown RBP9□□□□□ -0.97
VPS26A-208ENST00000497022 AXIN1O15169 862 aa8.99□□□□□ -0.97
VPS26A-208ENST00000497022 SALL2Q9Y467 1007 aaPredicted RBP8.99□□□□□ -0.97
VPS26A-208ENST00000497022 FMNL1O95466 1100 aaPredicted RBP8.98□□□□□ -0.97
VPS26A-208ENST00000497022 ATP6V1AP38606 617 aa8.98□□□□□ -0.97
VPS26A-208ENST00000497022 DAXXQ9UER7 740 aaPredicted RBP8.98□□□□□ -0.97
VPS26A-208ENST00000497022 WFS1O76024 890 aa8.97□□□□□ -0.97
VPS26A-208ENST00000497022 RDH13Q8NBN7 331 aa8.97□□□□□ -0.97
VPS26A-208ENST00000497022 FUT2Q10981 343 aa8.96□□□□□ -0.98
VPS26A-208ENST00000497022 GMPR2Q9P2T1 348 aaKnown RBP8.96□□□□□ -0.98
VPS26A-208ENST00000497022 DACH1Q9UI36 760 aa8.96□□□□□ -0.98
VPS26A-208ENST00000497022 C11orf95C9JLR9 678 aaPredicted RBP8.95□□□□□ -0.98
VPS26A-208ENST00000497022 SEMA3EO15041 775 aa8.95□□□□□ -0.98
VPS26A-208ENST00000497022 FAM160A2Q8N612 972 aaPredicted RBP8.95□□□□□ -0.98
VPS26A-208ENST00000497022 MSS51Q4VC12 460 aa8.94□□□□□ -0.98
VPS26A-208ENST00000497022 SULF1Q8IWU6 871 aa8.94□□□□□ -0.98
VPS26A-208ENST00000497022 SLC27A5Q9Y2P5 690 aa8.94□□□□□ -0.98
VPS26A-208ENST00000497022 GNPATO15228 680 aa8.93□□□□□ -0.98
VPS26A-208ENST00000497022 ZBTB24O43167 697 aaPredicted RBP8.93□□□□□ -0.98
VPS26A-208ENST00000497022 STK17AQ9UEE5 414 aa8.93□□□□□ -0.98
VPS26A-208ENST00000497022 TTC24A2A3L6 582 aaPredicted RBP8.92□□□□□ -0.98
VPS26A-208ENST00000497022 DDX11L8A8MPP1 907 aa8.92□□□□□ -0.98
VPS26A-208ENST00000497022 WIPF1O43516 503 aa8.92□□□□□ -0.98
VPS26A-208ENST00000497022 GCGRP47871 477 aa8.92□□□□□ -0.98
VPS26A-208ENST00000497022 NFX1Q12986 1120 aaKnown RBP8.92□□□□□ -0.98
VPS26A-208ENST00000497022 BRICD5Q6PL45 260 aa8.92□□□□□ -0.98
VPS26A-208ENST00000497022 WNT7AO00755 349 aa8.91□□□□□ -0.98
VPS26A-208ENST00000497022 KDM2AQ9Y2K7 1162 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms