RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 SLC4A3P48751 1232 aa14.94□□□□□ -0.02
TARDBP-210ENST00000496840 MINK1Q8N4C8 1332 aaPredicted RBP14.92□□□□□ -0.02
TARDBP-210ENST00000496840 IRF6O14896 467 aa14.9□□□□□ -0.02
TARDBP-210ENST00000496840 RNF40O75150 1001 aa14.9□□□□□ -0.02
TARDBP-210ENST00000496840 ZC3H15Q8WU90 426 aaKnown RBP14.9□□□□□ -0.02
TARDBP-210ENST00000496840 ZMYND10O75800 440 aa14.88□□□□□ -0.03
TARDBP-210ENST00000496840 BARGINQ6ZT62 677 aa14.87□□□□□ -0.03
TARDBP-210ENST00000496840 PLA2G2EQ9NZK7 142 aa14.87□□□□□ -0.03
TARDBP-210ENST00000496840 PHOX2BQ99453 314 aa14.86□□□□□ -0.03
TARDBP-210ENST00000496840 CCDC102AQ96A19 550 aa14.84□□□□□ -0.03
TARDBP-210ENST00000496840 DAXXQ9UER7 740 aaPredicted RBP14.84□□□□□ -0.03
TARDBP-210ENST00000496840 ITGBL1O95965 494 aaPredicted RBP14.83□□□□□ -0.04
TARDBP-210ENST00000496840 IFFO2Q5TF58 517 aa14.83□□□□□ -0.04
TARDBP-210ENST00000496840 PRR14Q9BWN1 585 aa14.81□□□□□ -0.04
TARDBP-210ENST00000496840 APLP1P51693 650 aa14.8□□□□□ -0.04
TARDBP-210ENST00000496840 KRI1Q8N9T8 703 aaKnown RBP14.78□□□□□ -0.04
TARDBP-210ENST00000496840 SLC10A3P09131 477 aa14.77□□□□□ -0.05
TARDBP-210ENST00000496840 RSPH4AQ5TD94 716 aa14.77□□□□□ -0.05
TARDBP-210ENST00000496840 NLRP7Q8WX94 980 aa14.77□□□□□ -0.05
TARDBP-210ENST00000496840 KMT5BQ4FZB7 885 aa14.74□□□□□ -0.05
TARDBP-210ENST00000496840 SULF1Q8IWU6 871 aa14.74□□□□□ -0.05
TARDBP-210ENST00000496840 CFHP08603 1231 aa14.73□□□□□ -0.05
TARDBP-210ENST00000496840 KCNC4Q03721 635 aa14.72□□□□□ -0.05
TARDBP-210ENST00000496840 TJAP1Q5JTD0 557 aa14.72□□□□□ -0.05
TARDBP-210ENST00000496840 ACTN4O43707 911 aaKnown RBP14.71□□□□□ -0.05
TARDBP-210ENST00000496840 MTRQ99707 1265 aa14.71□□□□□ -0.05
TARDBP-210ENST00000496840 DDX11L8A8MPP1 907 aa14.7□□□□□ -0.06
TARDBP-210ENST00000496840 MDM2Q00987 491 aaPredicted RBP14.69□□□□□ -0.06
TARDBP-210ENST00000496840 IL21Q9HBE4 155 aa14.69□□□□□ -0.06
TARDBP-210ENST00000496840 CLCN1P35523 988 aa14.68□□□□□ -0.06
TARDBP-210ENST00000496840 RDH13Q8NBN7 331 aa14.68□□□□□ -0.06
TARDBP-210ENST00000496840 TMUB1Q9BVT8 246 aa14.67□□□□□ -0.06
TARDBP-210ENST00000496840 GPCPD1Q9NPB8 672 aa14.67□□□□□ -0.06
TARDBP-210ENST00000496840 PCDHB3Q9Y5E6 796 aa14.67□□□□□ -0.06
TARDBP-210ENST00000496840 AMHR2Q16671 573 aa14.66□□□□□ -0.06
TARDBP-210ENST00000496840 AK7Q96M32 723 aa14.65□□□□□ -0.06
TARDBP-210ENST00000496840 CD46P15529 392 aa14.63□□□□□ -0.07
TARDBP-210ENST00000496840 GCGRP47871 477 aa14.63□□□□□ -0.07
TARDBP-210ENST00000496840 A0A0G2JS52 829 aa14.62□□□□□ -0.07
TARDBP-210ENST00000496840 COPS2P61201 443 aa14.61□□□□□ -0.07
TARDBP-210ENST00000496840 TRIM66O15016 1216 aa14.6□□□□□ -0.07
TARDBP-210ENST00000496840 BLOC1S3Q6QNY0 202 aa14.6□□□□□ -0.07
TARDBP-210ENST00000496840 ZNF516Q92618 1163 aa14.6□□□□□ -0.07
TARDBP-210ENST00000496840 FAM217BQ9NTX9 383 aaPredicted RBP14.6□□□□□ -0.07
TARDBP-210ENST00000496840 ZPR1O75312 459 aa14.58□□□□□ -0.08
TARDBP-210ENST00000496840 REPIN1Q9BWE0 567 aaKnown RBP14.58□□□□□ -0.08
TARDBP-210ENST00000496840 SLC24A3Q9HC58 644 aa14.57□□□□□ -0.08
TARDBP-210ENST00000496840 NR1I2O75469 434 aa14.55□□□□□ -0.08
TARDBP-210ENST00000496840 TTLL12Q14166 644 aaPredicted RBP14.55□□□□□ -0.08
TARDBP-210ENST00000496840 ATP6V1AP38606 617 aa14.54□□□□□ -0.08
TARDBP-210ENST00000496840 FUT2Q10981 343 aa14.54□□□□□ -0.08
TARDBP-210ENST00000496840 RGS20O76081 388 aa14.51□□□□□ -0.09
TARDBP-210ENST00000496840 SSTR3P32745 418 aaPredicted RBP14.51□□□□□ -0.09
TARDBP-210ENST00000496840 PUS10Q3MIT2 529 aaKnown RBP14.51□□□□□ -0.09
TARDBP-210ENST00000496840 MORN1Q5T089 497 aa14.51□□□□□ -0.09
TARDBP-210ENST00000496840 GIGYF2Q6Y7W6 1299 aaKnown RBP14.51□□□□□ -0.09
TARDBP-210ENST00000496840 PARP9Q8IXQ6 854 aa14.51□□□□□ -0.09
TARDBP-210ENST00000496840 GRIPAP1Q4V328 841 aa14.5□□□□□ -0.09
TARDBP-210ENST00000496840 SCUBE3Q8IX30 993 aa14.5□□□□□ -0.09
TARDBP-210ENST00000496840 NKX2-3Q8TAU0 364 aa14.5□□□□□ -0.09
TARDBP-210ENST00000496840 KDM4AO75164 1064 aa14.49□□□□□ -0.09
TARDBP-210ENST00000496840 USP46P62068 366 aa14.49□□□□□ -0.09
TARDBP-210ENST00000496840 PDE4DQ08499 809 aa14.48□□□□□ -0.09
TARDBP-210ENST00000496840 TLL1O43897 1013 aa14.45□□□□□ -0.1
TARDBP-210ENST00000496840 ADH1BP00325 375 aa14.44□□□□□ -0.1
TARDBP-210ENST00000496840 PPP1R18Q6NYC8 613 aa14.44□□□□□ -0.1
TARDBP-210ENST00000496840 SLC27A5Q9Y2P5 690 aa14.44□□□□□ -0.1
TARDBP-210ENST00000496840 SALL2Q9Y467 1007 aaPredicted RBP14.44□□□□□ -0.1
TARDBP-210ENST00000496840 GGCXP38435 758 aa14.42□□□□□ -0.1
TARDBP-210ENST00000496840 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.42□□□□□ -0.1
TARDBP-210ENST00000496840 HOXA2O43364 376 aa14.41□□□□□ -0.1
TARDBP-210ENST00000496840 NUTM1Q86Y26 1132 aa14.41□□□□□ -0.1
TARDBP-210ENST00000496840 THAP11Q96EK4 314 aa14.41□□□□□ -0.1
TARDBP-210ENST00000496840 MS4A1P11836 297 aa14.39□□□□□ -0.11
TARDBP-210ENST00000496840 SPSB2Q99619 263 aa14.39□□□□□ -0.11
TARDBP-210ENST00000496840 FMNL1O95466 1100 aaPredicted RBP14.38□□□□□ -0.11
TARDBP-210ENST00000496840 BEGAINQ9BUH8 593 aa14.38□□□□□ -0.11
TARDBP-210ENST00000496840 Q3C1V9 767 aa14.37□□□□□ -0.11
TARDBP-210ENST00000496840 BRICD5Q6PL45 260 aa14.37□□□□□ -0.11
TARDBP-210ENST00000496840 SPIRE2Q8WWL2 714 aa14.36□□□□□ -0.11
TARDBP-210ENST00000496840 SLC6A16Q9GZN6 736 aa14.35□□□□□ -0.11
TARDBP-210ENST00000496840 DIXDC1Q155Q3 683 aa14.34□□□□□ -0.11
TARDBP-210ENST00000496840 S1PR4O95977 384 aa14.33□□□□□ -0.12
TARDBP-210ENST00000496840 RNF19BQ6ZMZ0 732 aa14.33□□□□□ -0.12
TARDBP-210ENST00000496840 HLA-CQ95604 372 aa14.33□□□□□ -0.12
TARDBP-210ENST00000496840 RNF223E7ERA6 249 aa14.32□□□□□ -0.12
TARDBP-210ENST00000496840 MSS51Q4VC12 460 aa14.31□□□□□ -0.12
TARDBP-210ENST00000496840 FAM160A2Q8N612 972 aaPredicted RBP14.3□□□□□ -0.12
TARDBP-210ENST00000496840 ANKLE1Q8NAG6 615 aa14.3□□□□□ -0.12
TARDBP-210ENST00000496840 TBC1D2Q9BYX2 928 aa14.29□□□□□ -0.12
TARDBP-210ENST00000496840 FDX1P10109 184 aa14.28□□□□□ -0.12
TARDBP-210ENST00000496840 GJA5P36382 358 aa14.28□□□□□ -0.12
TARDBP-210ENST00000496840 GUCA2AQ02747 115 aa14.28□□□□□ -0.12
TARDBP-210ENST00000496840 MOXD2PA6NHM9 499 aa14.27□□□□□ -0.13
TARDBP-210ENST00000496840 V9GY48 417 aaPredicted RBP14.27□□□□□ -0.13
TARDBP-210ENST00000496840 TPRNQ4KMQ1 711 aa14.26□□□□□ -0.13
TARDBP-210ENST00000496840 USB1Q9BQ65 265 aaKnown RBP14.26□□□□□ -0.13
TARDBP-210ENST00000496840 PCDHGC3Q9UN70 934 aa14.25□□□□□ -0.13
TARDBP-210ENST00000496840 NDUFV2P19404 249 aa14.24□□□□□ -0.13
TARDBP-210ENST00000496840 PRKD2Q9BZL6 878 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms