RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 PTPRTO14522 1441 aa12.04□□□□□ -0.48
U2AF1-212ENST00000496462 LTKP29376 864 aa12.03□□□□□ -0.48
U2AF1-212ENST00000496462 CEP152O94986 1710 aa12.03□□□□□ -0.48
U2AF1-212ENST00000496462 RIMS2Q9UQ26 1411 aa12.03□□□□□ -0.48
U2AF1-212ENST00000496462 RNF17Q9BXT8 1623 aaKnown RBP12.03□□□□□ -0.48
U2AF1-212ENST00000496462 TET3O43151 1660 aa12.03□□□□□ -0.48
U2AF1-212ENST00000496462 PROSER2Q86WR7 435 aaPredicted RBP12.03□□□□□ -0.48
U2AF1-212ENST00000496462 L3MBTL2Q969R5 705 aa12.03□□□□□ -0.48
U2AF1-212ENST00000496462 UNC13BO14795 1591 aa12.02□□□□□ -0.48
U2AF1-212ENST00000496462 EFCAB6Q5THR3 1501 aa12.02□□□□□ -0.48
U2AF1-212ENST00000496462 STK26Q9P289 416 aa12.02□□□□□ -0.48
U2AF1-212ENST00000496462 NPHP4O75161 1426 aaPredicted RBP12.01□□□□□ -0.49
U2AF1-212ENST00000496462 TMEM2Q9UHN6 1383 aa12.01□□□□□ -0.49
U2AF1-212ENST00000496462 EIF4G2P78344 907 aaKnown RBP eCLIP12.01□□□□□ -0.49
U2AF1-212ENST00000496462 PLA2R1Q13018 1463 aa12□□□□□ -0.49
U2AF1-212ENST00000496462 IQGAP3Q86VI3 1631 aa12□□□□□ -0.49
U2AF1-212ENST00000496462 MROH1Q8NDA8 1641 aa12□□□□□ -0.49
U2AF1-212ENST00000496462 RBM33Q96EV2 1170 aaKnown RBP12□□□□□ -0.49
U2AF1-212ENST00000496462 ROCK2O75116 1388 aaKnown RBP12□□□□□ -0.49
U2AF1-212ENST00000496462 NOS1P29475 1434 aa11.99□□□□□ -0.49
U2AF1-212ENST00000496462 ATF3P18847 181 aa11.99□□□□□ -0.49
U2AF1-212ENST00000496462 TBX22Q9Y458 520 aa11.99□□□□□ -0.49
U2AF1-212ENST00000496462 STRCQ7RTU9 1775 aa11.99□□□□□ -0.49
U2AF1-212ENST00000496462 SPATA31D1Q6ZQQ2 1576 aa11.97□□□□□ -0.49
U2AF1-212ENST00000496462 TOM1O60784 492 aa11.97□□□□□ -0.49
U2AF1-212ENST00000496462 SCAF11Q99590 1463 aaKnown RBP11.96□□□□□ -0.49
U2AF1-212ENST00000496462 TRPM2O94759 1503 aa11.95□□□□□ -0.5
U2AF1-212ENST00000496462 TMF1P82094 1093 aa11.94□□□□□ -0.5
U2AF1-212ENST00000496462 TRAK1Q9UPV9 953 aa11.94□□□□□ -0.5
U2AF1-212ENST00000496462 SRPK2P78362 688 aaKnown RBP11.93□□□□□ -0.5
U2AF1-212ENST00000496462 ZNF142P52746 1687 aaPredicted RBP11.93□□□□□ -0.5
U2AF1-212ENST00000496462 PLEKHG1Q9ULL1 1385 aa11.93□□□□□ -0.5
U2AF1-212ENST00000496462 KCNA6P17658 529 aa11.93□□□□□ -0.5
U2AF1-212ENST00000496462 DEPDC5O75140 1603 aa11.92□□□□□ -0.5
U2AF1-212ENST00000496462 CFAP70Q5T0N1 1121 aa11.92□□□□□ -0.5
U2AF1-212ENST00000496462 AMOTL2Q9Y2J4 779 aa11.92□□□□□ -0.5
U2AF1-212ENST00000496462 VWDEQ8N2E2 1590 aa11.91□□□□□ -0.5
U2AF1-212ENST00000496462 HAP1P54257 671 aaPredicted RBP11.91□□□□□ -0.5
U2AF1-212ENST00000496462 SAFB2Q14151 953 aaKnown RBP eCLIP11.91□□□□□ -0.5
U2AF1-212ENST00000496462 C14orf93Q9H972 538 aaKnown RBP11.91□□□□□ -0.5
U2AF1-212ENST00000496462 PIK3R4Q99570 1358 aa11.91□□□□□ -0.5
U2AF1-212ENST00000496462 PIK3C2BO00750 1634 aa11.9□□□□□ -0.5
U2AF1-212ENST00000496462 ADGRB3O60242 1522 aa11.9□□□□□ -0.5
U2AF1-212ENST00000496462 EVC2Q86UK5 1308 aa11.9□□□□□ -0.5
U2AF1-212ENST00000496462 CENPJQ9HC77 1338 aaPredicted RBP11.9□□□□□ -0.51
U2AF1-212ENST00000496462 MSH6P52701 1360 aa11.89□□□□□ -0.51
U2AF1-212ENST00000496462 CADPS2Q86UW7 1296 aa11.89□□□□□ -0.51
U2AF1-212ENST00000496462 TMC1Q8TDI8 760 aa11.89□□□□□ -0.51
U2AF1-212ENST00000496462 ADGRF5Q8IZF2 1346 aa11.88□□□□□ -0.51
U2AF1-212ENST00000496462 SYNMO15061 1565 aa11.88□□□□□ -0.51
U2AF1-212ENST00000496462 TMEM132EQ6IEE7 984 aa11.88□□□□□ -0.51
U2AF1-212ENST00000496462 HDGFL2Q7Z4V5 671 aaPredicted RBP11.87□□□□□ -0.51
U2AF1-212ENST00000496462 LTBP4Q8N2S1 1624 aa11.87□□□□□ -0.51
U2AF1-212ENST00000496462 NEURL4Q96JN8 1562 aa11.87□□□□□ -0.51
U2AF1-212ENST00000496462 TMEM94Q12767 1356 aa11.86□□□□□ -0.51
U2AF1-212ENST00000496462 ZFYVE9O95405 1425 aa11.86□□□□□ -0.51
U2AF1-212ENST00000496462 UBR1Q8IWV7 1749 aa11.86□□□□□ -0.51
U2AF1-212ENST00000496462 NGDNQ8NEJ9 315 aaKnown RBP11.86□□□□□ -0.51
U2AF1-212ENST00000496462 MED14O60244 1454 aa11.86□□□□□ -0.51
U2AF1-212ENST00000496462 HSPA1LP34931 641 aa11.85□□□□□ -0.51
U2AF1-212ENST00000496462 ARHGAP23Q9P227 1491 aa11.85□□□□□ -0.51
U2AF1-212ENST00000496462 DISP3Q9P2K9 1392 aa11.85□□□□□ -0.51
U2AF1-212ENST00000496462 TERF2IPQ9NYB0 399 aa11.85□□□□□ -0.51
U2AF1-212ENST00000496462 PRAM1Q96QH2 718 aa11.85□□□□□ -0.51
U2AF1-212ENST00000496462 POLR1AO95602 1720 aaPredicted RBP11.84□□□□□ -0.51
U2AF1-212ENST00000496462 SPHKAPQ2M3C7 1700 aa11.84□□□□□ -0.51
U2AF1-212ENST00000496462 IQGAP1P46940 1657 aa11.84□□□□□ -0.51
U2AF1-212ENST00000496462 KIF1BO60333 1816 aa11.84□□□□□ -0.51
U2AF1-212ENST00000496462 MINK1Q8N4C8 1332 aaPredicted RBP11.84□□□□□ -0.51
U2AF1-212ENST00000496462 SLIT1O75093 1534 aa11.84□□□□□ -0.51
U2AF1-212ENST00000496462 C19orf44Q9H6X5 657 aa11.84□□□□□ -0.51
U2AF1-212ENST00000496462 E9PCH4 1651 aa11.84□□□□□ -0.51
U2AF1-212ENST00000496462 PSME1Q06323 249 aa11.84□□□□□ -0.51
U2AF1-212ENST00000496462 LMOD2Q6P5Q4 547 aa11.84□□□□□ -0.51
U2AF1-212ENST00000496462 SIRT1Q96EB6 747 aa11.84□□□□□ -0.51
U2AF1-212ENST00000496462 CPS1P31327 1500 aa11.83□□□□□ -0.52
U2AF1-212ENST00000496462 LRPPRCP42704 1394 aaKnown RBP11.83□□□□□ -0.52
U2AF1-212ENST00000496462 SPATA31E1Q6ZUB1 1445 aa11.82□□□□□ -0.52
U2AF1-212ENST00000496462 MYOM2P54296 1465 aa11.81□□□□□ -0.52
U2AF1-212ENST00000496462 GPRASP1Q5JY77 1395 aa11.81□□□□□ -0.52
U2AF1-212ENST00000496462 PHF23Q9BUL5 403 aaPredicted RBP11.8□□□□□ -0.52
U2AF1-212ENST00000496462 LRRC7Q96NW7 1537 aa11.8□□□□□ -0.52
U2AF1-212ENST00000496462 USP47Q96K76 1375 aa11.79□□□□□ -0.52
U2AF1-212ENST00000496462 ABCC11Q96J66 1382 aa11.79□□□□□ -0.52
U2AF1-212ENST00000496462 ESCO1Q5FWF5 840 aa11.78□□□□□ -0.52
U2AF1-212ENST00000496462 CLTCL1P53675 1640 aa11.78□□□□□ -0.52
U2AF1-212ENST00000496462 PAK3O75914 559 aaPredicted RBP11.78□□□□□ -0.52
U2AF1-212ENST00000496462 HSPA5P11021 654 aaKnown RBP11.78□□□□□ -0.52
U2AF1-212ENST00000496462 PRAG1Q86YV5 1406 aa11.78□□□□□ -0.52
U2AF1-212ENST00000496462 YTHDC2Q9H6S0 1430 aaKnown RBP11.78□□□□□ -0.52
U2AF1-212ENST00000496462 KNSTRNQ9Y448 316 aa11.78□□□□□ -0.52
U2AF1-212ENST00000496462 ST20-MTHFSA0A0A6YYL1 179 aa11.77□□□□□ -0.52
U2AF1-212ENST00000496462 NBPF1Q3BBV0 1214 aa11.77□□□□□ -0.52
U2AF1-212ENST00000496462 SLAIN2Q9P270 581 aa11.77□□□□□ -0.52
U2AF1-212ENST00000496462 HIRIP3Q9BW71 556 aaPredicted RBP11.77□□□□□ -0.52
U2AF1-212ENST00000496462 IQSEC2Q5JU85 1478 aa11.77□□□□□ -0.53
U2AF1-212ENST00000496462 ATAD2Q6PL18 1390 aa11.77□□□□□ -0.53
U2AF1-212ENST00000496462 NUTM2FA1L443 756 aa11.77□□□□□ -0.53
U2AF1-212ENST00000496462 TMEM131LA2VDJ0 1609 aa11.77□□□□□ -0.53
U2AF1-212ENST00000496462 ZNF316A6NFI3 1004 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms