RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 MLECQ14165 292 aa18.95■□□□□ 0.62
SPTBN1-205ENST00000496323 SLC52A1Q9NWF4 448 aa18.95■□□□□ 0.62
SPTBN1-205ENST00000496323 RPGRIP1LQ68CZ1 1315 aa18.95■□□□□ 0.62
SPTBN1-205ENST00000496323 IFT172Q9UG01 1749 aa18.94■□□□□ 0.62
SPTBN1-205ENST00000496323 CFAP65Q6ZU64 1925 aaKnown RBP18.94■□□□□ 0.62
SPTBN1-205ENST00000496323 SCAF11Q99590 1463 aaKnown RBP18.93■□□□□ 0.62
SPTBN1-205ENST00000496323 DISP3Q9P2K9 1392 aa18.92■□□□□ 0.62
SPTBN1-205ENST00000496323 PRKRIP1Q9H875 184 aaPredicted RBP18.92■□□□□ 0.62
SPTBN1-205ENST00000496323 ERVK-7P63135 1459 aa18.91■□□□□ 0.62
SPTBN1-205ENST00000496323 PREX1Q8TCU6 1659 aa18.9■□□□□ 0.62
SPTBN1-205ENST00000496323 PIK3C2GO75747 1445 aa18.9■□□□□ 0.62
SPTBN1-205ENST00000496323 KIAA1210Q9ULL0 1709 aa18.9■□□□□ 0.62
SPTBN1-205ENST00000496323 IQGAP1P46940 1657 aa18.9■□□□□ 0.62
SPTBN1-205ENST00000496323 TRHP20396 242 aaPredicted RBP18.89■□□□□ 0.61
SPTBN1-205ENST00000496323 C14orf93Q9H972 538 aaKnown RBP18.88■□□□□ 0.61
SPTBN1-205ENST00000496323 PPLO60437 1756 aa18.87■□□□□ 0.61
SPTBN1-205ENST00000496323 NEXMIFQ5QGS0 1516 aa18.87■□□□□ 0.61
SPTBN1-205ENST00000496323 TMF1P82094 1093 aa18.87■□□□□ 0.61
SPTBN1-205ENST00000496323 CLTCQ00610 1675 aaKnown RBP18.87■□□□□ 0.61
SPTBN1-205ENST00000496323 NUTM2DQ5VT03 806 aaPredicted RBP18.86■□□□□ 0.61
SPTBN1-205ENST00000496323 VGFO15240 615 aaPredicted RBP18.85■□□□□ 0.61
SPTBN1-205ENST00000496323 TMEM131LA2VDJ0 1609 aa18.84■□□□□ 0.61
SPTBN1-205ENST00000496323 ZMYM3Q14202 1370 aa18.84■□□□□ 0.61
SPTBN1-205ENST00000496323 CCDC184Q52MB2 194 aa18.84■□□□□ 0.61
SPTBN1-205ENST00000496323 SPATA31D1Q6ZQQ2 1576 aa18.83■□□□□ 0.61
SPTBN1-205ENST00000496323 EIF3AQ14152 1382 aaKnown RBP18.83■□□□□ 0.61
SPTBN1-205ENST00000496323 DNAJC5Q9H3Z4 198 aa18.83■□□□□ 0.6
SPTBN1-205ENST00000496323 ZFYVE9O95405 1425 aa18.82■□□□□ 0.6
SPTBN1-205ENST00000496323 ADGRB1O14514 1584 aa18.82■□□□□ 0.6
SPTBN1-205ENST00000496323 SETBP1Q9Y6X0 1596 aa18.82■□□□□ 0.6
SPTBN1-205ENST00000496323 SCAF1Q9H7N4 1312 aaKnown RBP18.81■□□□□ 0.6
SPTBN1-205ENST00000496323 ESF1Q9H501 851 aaKnown RBP18.81■□□□□ 0.6
SPTBN1-205ENST00000496323 TMEM132EQ6IEE7 984 aa18.8■□□□□ 0.6
SPTBN1-205ENST00000496323 PER1O15534 1290 aaPredicted RBP18.79■□□□□ 0.6
SPTBN1-205ENST00000496323 CNGB1Q14028 1251 aaPredicted RBP18.77■□□□□ 0.6
SPTBN1-205ENST00000496323 TRAK1Q9UPV9 953 aa18.76■□□□□ 0.59
SPTBN1-205ENST00000496323 A2ML1A8K2U0 1454 aa18.76■□□□□ 0.59
SPTBN1-205ENST00000496323 PANK3Q9H999 370 aa18.76■□□□□ 0.59
SPTBN1-205ENST00000496323 STAG3Q9UJ98 1225 aa18.76■□□□□ 0.59
SPTBN1-205ENST00000496323 CDCA8Q53HL2 280 aa18.74■□□□□ 0.59
SPTBN1-205ENST00000496323 MRS2Q9HD23 443 aa18.74■□□□□ 0.59
SPTBN1-205ENST00000496323 SBNO2Q9Y2G9 1366 aa18.74■□□□□ 0.59
SPTBN1-205ENST00000496323 MYO5BQ9ULV0 1848 aa18.73■□□□□ 0.59
SPTBN1-205ENST00000496323 CENPJQ9HC77 1338 aaPredicted RBP18.73■□□□□ 0.59
SPTBN1-205ENST00000496323 SENP3Q9H4L4 574 aaPredicted RBP18.72■□□□□ 0.59
SPTBN1-205ENST00000496323 MYO3AQ8NEV4 1616 aa18.72■□□□□ 0.59
SPTBN1-205ENST00000496323 SLC24A1O60721 1099 aa18.72■□□□□ 0.59
SPTBN1-205ENST00000496323 TNRQ92752 1358 aa18.7■□□□□ 0.58
SPTBN1-205ENST00000496323 GTF3C3Q9Y5Q9 886 aa18.7■□□□□ 0.58
SPTBN1-205ENST00000496323 ASXL1Q8IXJ9 1541 aa18.7■□□□□ 0.58
SPTBN1-205ENST00000496323 RALBP1Q15311 655 aa18.69■□□□□ 0.58
SPTBN1-205ENST00000496323 RIMS2Q9UQ26 1411 aa18.69■□□□□ 0.58
SPTBN1-205ENST00000496323 KTN1Q86UP2 1357 aaKnown RBP18.69■□□□□ 0.58
SPTBN1-205ENST00000496323 PARD3Q8TEW0 1356 aa18.67■□□□□ 0.58
SPTBN1-205ENST00000496323 CEBPAP49715 358 aaPredicted RBP18.67■□□□□ 0.58
SPTBN1-205ENST00000496323 FAM9BQ8IZU0 186 aa18.65■□□□□ 0.58
SPTBN1-205ENST00000496323 MYBBP1AQ9BQG0 1328 aaKnown RBP18.65■□□□□ 0.58
SPTBN1-205ENST00000496323 ALKQ9UM73 1620 aa18.64■□□□□ 0.57
SPTBN1-205ENST00000496323 CC2D1BQ5T0F9 858 aaKnown RBP18.64■□□□□ 0.57
SPTBN1-205ENST00000496323 STK26Q9P289 416 aa18.64■□□□□ 0.57
SPTBN1-205ENST00000496323 HNRNPUQ00839 825 aaKnown RBP eCLIP18.63■□□□□ 0.57
SPTBN1-205ENST00000496323 MYOM1P52179 1685 aa18.63■□□□□ 0.57
SPTBN1-205ENST00000496323 YTHDC2Q9H6S0 1430 aaKnown RBP18.62■□□□□ 0.57
SPTBN1-205ENST00000496323 KDM5AP29375 1690 aaKnown RBP18.62■□□□□ 0.57
SPTBN1-205ENST00000496323 PTPRMP28827 1452 aa18.61■□□□□ 0.57
SPTBN1-205ENST00000496323 AMER1Q5JTC6 1135 aaPredicted RBP18.61■□□□□ 0.57
SPTBN1-205ENST00000496323 QRICH2Q9H0J4 1663 aa18.61■□□□□ 0.57
SPTBN1-205ENST00000496323 ARHGEF28Q8N1W1 1705 aaKnown RBP18.61■□□□□ 0.57
SPTBN1-205ENST00000496323 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.61■□□□□ 0.57
SPTBN1-205ENST00000496323 PNISRQ8TF01 805 aaKnown RBP18.6■□□□□ 0.57
SPTBN1-205ENST00000496323 KNSTRNQ9Y448 316 aa18.6■□□□□ 0.57
SPTBN1-205ENST00000496323 BRD4O60885 1362 aaPredicted RBP18.6■□□□□ 0.57
SPTBN1-205ENST00000496323 TMC1Q8TDI8 760 aa18.59■□□□□ 0.57
SPTBN1-205ENST00000496323 TMEM2Q9UHN6 1383 aa18.59■□□□□ 0.57
SPTBN1-205ENST00000496323 SAFB2Q14151 953 aaKnown RBP eCLIP18.58■□□□□ 0.57
SPTBN1-205ENST00000496323 NLRP13Q86W25 1043 aa18.58■□□□□ 0.57
SPTBN1-205ENST00000496323 NLRP1Q9C000 1473 aa18.58■□□□□ 0.56
SPTBN1-205ENST00000496323 CARD14Q9BXL6 1004 aa18.58■□□□□ 0.56
SPTBN1-205ENST00000496323 TULP4Q9NRJ4 1543 aa18.57■□□□□ 0.56
SPTBN1-205ENST00000496323 PRAM1Q96QH2 718 aa18.57■□□□□ 0.56
SPTBN1-205ENST00000496323 PUS7Q96PZ0 661 aaKnown RBP18.56■□□□□ 0.56
SPTBN1-205ENST00000496323 EVC2Q86UK5 1308 aa18.56■□□□□ 0.56
SPTBN1-205ENST00000496323 HDGFP51858 240 aaKnown RBP18.55■□□□□ 0.56
SPTBN1-205ENST00000496323 UBR1Q8IWV7 1749 aa18.55■□□□□ 0.56
SPTBN1-205ENST00000496323 C3P01024 1663 aa18.55■□□□□ 0.56
SPTBN1-205ENST00000496323 NRXN3Q9Y4C0 1643 aa18.55■□□□□ 0.56
SPTBN1-205ENST00000496323 PLPPR3Q6T4P5 718 aa18.55■□□□□ 0.56
SPTBN1-205ENST00000496323 SLC12A5Q9H2X9 1139 aa18.55■□□□□ 0.56
SPTBN1-205ENST00000496323 LRPPRCP42704 1394 aaKnown RBP18.54■□□□□ 0.56
SPTBN1-205ENST00000496323 NPC1L1Q9UHC9 1359 aa18.54■□□□□ 0.56
SPTBN1-205ENST00000496323 METP08581 1390 aa18.54■□□□□ 0.56
SPTBN1-205ENST00000496323 FER1L4A9Z1Z3 1794 aa18.53■□□□□ 0.56
SPTBN1-205ENST00000496323 SETD1AO15047 1707 aaKnown RBP18.53■□□□□ 0.56
SPTBN1-205ENST00000496323 LTKP29376 864 aa18.53■□□□□ 0.56
SPTBN1-205ENST00000496323 POGKQ9P215 609 aa18.53■□□□□ 0.56
SPTBN1-205ENST00000496323 CABP2Q9NPB3 220 aa18.52■□□□□ 0.56
SPTBN1-205ENST00000496323 ABCC11Q96J66 1382 aa18.52■□□□□ 0.55
SPTBN1-205ENST00000496323 MINK1Q8N4C8 1332 aaPredicted RBP18.51■□□□□ 0.55
SPTBN1-205ENST00000496323 DLC1Q96QB1 1528 aa18.5■□□□□ 0.55
SPTBN1-205ENST00000496323 PPP2R1AP30153 589 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms