RNA–Protein interactions for RNA: ENST00000496310.1

UBP1-213, Transcript of upstream binding protein 1, humanhuman

TSL 4

Gene UBP1, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-213ENST00000496310 NUTM2DQ5VT03 806 aaPredicted RBP11.3□□□□□ -0.6
UBP1-213ENST00000496310 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.29□□□□□ -0.6
UBP1-213ENST00000496310 MYOM3Q5VTT5 1437 aa11.29□□□□□ -0.6
UBP1-213ENST00000496310 NUTM2BA6NNL0 878 aaPredicted RBP11.29□□□□□ -0.6
UBP1-213ENST00000496310 NUTM2EB1AL46 878 aaPredicted RBP11.29□□□□□ -0.6
UBP1-213ENST00000496310 NUTM2AQ8IVF1 878 aaPredicted RBP11.29□□□□□ -0.6
UBP1-213ENST00000496310 PTPN23Q9H3S7 1636 aa11.28□□□□□ -0.6
UBP1-213ENST00000496310 LOC105371045A0A1W2PR82 267 aa11.28□□□□□ -0.6
UBP1-213ENST00000496310 C14orf37Q86TY3 774 aa11.28□□□□□ -0.6
UBP1-213ENST00000496310 ADGRB3O60242 1522 aa11.28□□□□□ -0.6
UBP1-213ENST00000496310 NKTRP30414 1462 aaKnown RBP11.27□□□□□ -0.6
UBP1-213ENST00000496310 KANK1Q14678 1352 aa11.27□□□□□ -0.61
UBP1-213ENST00000496310 SHPRHQ149N8 1683 aa11.27□□□□□ -0.61
UBP1-213ENST00000496310 ERBINQ96RT1 1412 aa11.26□□□□□ -0.61
UBP1-213ENST00000496310 PPP1R15AO75807 674 aaPredicted RBP11.25□□□□□ -0.61
UBP1-213ENST00000496310 CHGAP10645 457 aaKnown RBP11.24□□□□□ -0.61
UBP1-213ENST00000496310 RXRBP28702 533 aa11.24□□□□□ -0.61
UBP1-213ENST00000496310 ZNF772Q68DY9 489 aaPredicted RBP11.24□□□□□ -0.61
UBP1-213ENST00000496310 NOS1P29475 1434 aa11.24□□□□□ -0.61
UBP1-213ENST00000496310 DAPK1P53355 1430 aa11.24□□□□□ -0.61
UBP1-213ENST00000496310 VPS8Q8N3P4 1428 aa11.24□□□□□ -0.61
UBP1-213ENST00000496310 RIMS2Q9UQ26 1411 aa11.23□□□□□ -0.61
UBP1-213ENST00000496310 TMEM131LA2VDJ0 1609 aa11.23□□□□□ -0.61
UBP1-213ENST00000496310 ZFYVE9O95405 1425 aa11.22□□□□□ -0.61
UBP1-213ENST00000496310 SPATA31A6Q5VVP1 1343 aa11.22□□□□□ -0.61
UBP1-213ENST00000496310 LMTK2Q8IWU2 1503 aa11.22□□□□□ -0.61
UBP1-213ENST00000496310 DDX17Q92841 729 aaKnown RBP11.22□□□□□ -0.61
UBP1-213ENST00000496310 AHDC1Q5TGY3 1603 aaPredicted RBP11.21□□□□□ -0.61
UBP1-213ENST00000496310 DIP2AQ14689 1571 aa11.21□□□□□ -0.61
UBP1-213ENST00000496310 AFF2P51816 1311 aa11.21□□□□□ -0.61
UBP1-213ENST00000496310 PLEKHG1Q9ULL1 1385 aa11.2□□□□□ -0.62
UBP1-213ENST00000496310 ATF3P18847 181 aa11.2□□□□□ -0.62
UBP1-213ENST00000496310 FGD6Q6ZV73 1430 aa11.19□□□□□ -0.62
UBP1-213ENST00000496310 BRINP3Q76B58 766 aa11.19□□□□□ -0.62
UBP1-213ENST00000496310 SLC52A1Q9NWF4 448 aa11.19□□□□□ -0.62
UBP1-213ENST00000496310 ADAMTS13Q76LX8 1427 aa11.18□□□□□ -0.62
UBP1-213ENST00000496310 ANKRD30AQ9BXX3 1397 aa11.18□□□□□ -0.62
UBP1-213ENST00000496310 E9PCH4 1651 aa11.18□□□□□ -0.62
UBP1-213ENST00000496310 CADPS2Q86UW7 1296 aa11.18□□□□□ -0.62
UBP1-213ENST00000496310 C8orf37Q96NL8 207 aa11.18□□□□□ -0.62
UBP1-213ENST00000496310 C19orf44Q9H6X5 657 aa11.18□□□□□ -0.62
UBP1-213ENST00000496310 PTPRUQ92729 1446 aa11.18□□□□□ -0.62
UBP1-213ENST00000496310 QTRT2Q9H974 415 aaKnown RBP11.17□□□□□ -0.62
UBP1-213ENST00000496310 AMOTL2Q9Y2J4 779 aa11.17□□□□□ -0.62
UBP1-213ENST00000496310 TBX22Q9Y458 520 aa11.17□□□□□ -0.62
UBP1-213ENST00000496310 RGS12O14924 1447 aa11.17□□□□□ -0.62
UBP1-213ENST00000496310 NHSL1Q5SYE7 1610 aa11.17□□□□□ -0.62
UBP1-213ENST00000496310 ASXL1Q8IXJ9 1541 aa11.15□□□□□ -0.62
UBP1-213ENST00000496310 ADAMTS2O95450 1211 aa11.15□□□□□ -0.62
UBP1-213ENST00000496310 HDGFP51858 240 aaKnown RBP11.14□□□□□ -0.63
UBP1-213ENST00000496310 FAM50AQ14320 339 aaKnown RBP11.14□□□□□ -0.63
UBP1-213ENST00000496310 CDK12Q9NYV4 1490 aaPredicted RBP11.13□□□□□ -0.63
UBP1-213ENST00000496310 UNC13BO14795 1591 aa11.13□□□□□ -0.63
UBP1-213ENST00000496310 NRXN3Q9Y4C0 1643 aa11.13□□□□□ -0.63
UBP1-213ENST00000496310 NCOA3Q9Y6Q9 1424 aa11.12□□□□□ -0.63
UBP1-213ENST00000496310 RBM6P78332 1123 aaKnown RBP11.12□□□□□ -0.63
UBP1-213ENST00000496310 APLP2Q06481 763 aa11.12□□□□□ -0.63
UBP1-213ENST00000496310 TRPM2O94759 1503 aa11.12□□□□□ -0.63
UBP1-213ENST00000496310 NALCNQ8IZF0 1738 aa11.12□□□□□ -0.63
UBP1-213ENST00000496310 XRN1Q8IZH2 1706 aaKnown RBP11.12□□□□□ -0.63
UBP1-213ENST00000496310 RPRD2Q5VT52 1461 aaKnown RBP11.12□□□□□ -0.63
UBP1-213ENST00000496310 SETBP1Q9Y6X0 1596 aa11.11□□□□□ -0.63
UBP1-213ENST00000496310 MST1RQ04912 1400 aa11.11□□□□□ -0.63
UBP1-213ENST00000496310 ANKRD50Q9ULJ7 1429 aa11.11□□□□□ -0.63
UBP1-213ENST00000496310 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.11□□□□□ -0.63
UBP1-213ENST00000496310 NGLY1Q96IV0 654 aa11.11□□□□□ -0.63
UBP1-213ENST00000496310 SETD5Q9C0A6 1442 aa11.1□□□□□ -0.63
UBP1-213ENST00000496310 PNPLA6Q8IY17 1366 aa11.1□□□□□ -0.63
UBP1-213ENST00000496310 ADGRL2O95490 1459 aa11.1□□□□□ -0.63
UBP1-213ENST00000496310 SRCAPQ6ZRS2 3230 aa11.1□□□□□ -0.63
UBP1-213ENST00000496310 LRRC59Q96AG4 307 aaKnown RBP11.09□□□□□ -0.63
UBP1-213ENST00000496310 METP08581 1390 aa11.08□□□□□ -0.64
UBP1-213ENST00000496310 PIK3R4Q99570 1358 aa11.07□□□□□ -0.64
UBP1-213ENST00000496310 USP21Q9UK80 565 aa11.07□□□□□ -0.64
UBP1-213ENST00000496310 BRWD3Q6RI45 1802 aa11.07□□□□□ -0.64
UBP1-213ENST00000496310 ZNF326Q5BKZ1 582 aaKnown RBP11.06□□□□□ -0.64
UBP1-213ENST00000496310 SPHKAPQ2M3C7 1700 aa11.06□□□□□ -0.64
UBP1-213ENST00000496310 MARF1Q9Y4F3 1742 aaKnown RBP11.06□□□□□ -0.64
UBP1-213ENST00000496310 IQGAP3Q86VI3 1631 aa11.06□□□□□ -0.64
UBP1-213ENST00000496310 ATAD2Q6PL18 1390 aa11.05□□□□□ -0.64
UBP1-213ENST00000496310 ORAI2Q96SN7 254 aa11.05□□□□□ -0.64
UBP1-213ENST00000496310 ZRANB1Q9UGI0 708 aa11.05□□□□□ -0.64
UBP1-213ENST00000496310 DCCP43146 1447 aa11.04□□□□□ -0.64
UBP1-213ENST00000496310 ITGAEP38570 1179 aa11.04□□□□□ -0.64
UBP1-213ENST00000496310 ADRA2BP18089 450 aa11.03□□□□□ -0.64
UBP1-213ENST00000496310 KIF1BO60333 1816 aa11.02□□□□□ -0.64
UBP1-213ENST00000496310 ADGRL3Q9HAR2 1447 aa11.02□□□□□ -0.64
UBP1-213ENST00000496310 C1orf167Q5SNV9 1468 aa11.02□□□□□ -0.65
UBP1-213ENST00000496310 XPCQ01831 940 aaPredicted RBP11.02□□□□□ -0.65
UBP1-213ENST00000496310 TRPC5Q9UL62 973 aaPredicted RBP11.02□□□□□ -0.65
UBP1-213ENST00000496310 EP400Q96L91 3159 aa11.02□□□□□ -0.65
UBP1-213ENST00000496310 NUP155O75694 1391 aa11.02□□□□□ -0.65
UBP1-213ENST00000496310 ATRNO75882 1429 aa11.01□□□□□ -0.65
UBP1-213ENST00000496310 LAMC1P11047 1609 aa11□□□□□ -0.65
UBP1-213ENST00000496310 CLTCL1P53675 1640 aa11□□□□□ -0.65
UBP1-213ENST00000496310 PLEKHG5O94827 1062 aa10.99□□□□□ -0.65
UBP1-213ENST00000496310 DEFB132Q7Z7B7 95 aa10.99□□□□□ -0.65
UBP1-213ENST00000496310 FNBP4Q8N3X1 1017 aaPredicted RBP10.99□□□□□ -0.65
UBP1-213ENST00000496310 SOS2Q07890 1332 aaPredicted RBP10.99□□□□□ -0.65
UBP1-213ENST00000496310 NEXMIFQ5QGS0 1516 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms