RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 LRP6O75581 1613 aa16■□□□□ 0.15
ERGIC3-219ENST00000496172 CDK12Q9NYV4 1490 aaPredicted RBP15.99■□□□□ 0.15
ERGIC3-219ENST00000496172 ITGAEP38570 1179 aa15.99■□□□□ 0.15
ERGIC3-219ENST00000496172 MSH6P52701 1360 aa15.99■□□□□ 0.15
ERGIC3-219ENST00000496172 SPATA31A6Q5VVP1 1343 aa15.98■□□□□ 0.15
ERGIC3-219ENST00000496172 ANKRD50Q9ULJ7 1429 aa15.98■□□□□ 0.15
ERGIC3-219ENST00000496172 AHDC1Q5TGY3 1603 aaPredicted RBP15.97■□□□□ 0.15
ERGIC3-219ENST00000496172 LMTK2Q8IWU2 1503 aa15.97■□□□□ 0.15
ERGIC3-219ENST00000496172 ROCK1Q13464 1354 aa15.97■□□□□ 0.15
ERGIC3-219ENST00000496172 ADGRB3O60242 1522 aa15.96■□□□□ 0.15
ERGIC3-219ENST00000496172 ZNF772Q68DY9 489 aaPredicted RBP15.96■□□□□ 0.15
ERGIC3-219ENST00000496172 PROSER2Q86WR7 435 aaPredicted RBP15.96■□□□□ 0.15
ERGIC3-219ENST00000496172 CHD2O14647 1828 aaKnown RBP15.96■□□□□ 0.14
ERGIC3-219ENST00000496172 SRCAPQ6ZRS2 3230 aa15.94■□□□□ 0.14
ERGIC3-219ENST00000496172 NCOA3Q9Y6Q9 1424 aa15.94■□□□□ 0.14
ERGIC3-219ENST00000496172 SLAIN2Q9P270 581 aa15.94■□□□□ 0.14
ERGIC3-219ENST00000496172 STAG3Q9UJ98 1225 aa15.91■□□□□ 0.14
ERGIC3-219ENST00000496172 NOS1P29475 1434 aa15.91■□□□□ 0.14
ERGIC3-219ENST00000496172 DIP2AQ14689 1571 aa15.91■□□□□ 0.14
ERGIC3-219ENST00000496172 SLC26A8Q96RN1 970 aa15.9■□□□□ 0.14
ERGIC3-219ENST00000496172 RRBP1Q9P2E9 1410 aaKnown RBP15.89■□□□□ 0.13
ERGIC3-219ENST00000496172 IDI1Q13907 227 aa15.88■□□□□ 0.13
ERGIC3-219ENST00000496172 RBM33Q96EV2 1170 aaKnown RBP15.88■□□□□ 0.13
ERGIC3-219ENST00000496172 ZFYVE9O95405 1425 aa15.87■□□□□ 0.13
ERGIC3-219ENST00000496172 TRIM52Q96A61 297 aa15.87■□□□□ 0.13
ERGIC3-219ENST00000496172 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.87■□□□□ 0.13
ERGIC3-219ENST00000496172 PLEKHG1Q9ULL1 1385 aa15.87■□□□□ 0.13
ERGIC3-219ENST00000496172 RPRD2Q5VT52 1461 aaKnown RBP15.86■□□□□ 0.13
ERGIC3-219ENST00000496172 RXRBP28702 533 aa15.86■□□□□ 0.13
ERGIC3-219ENST00000496172 SLC52A1Q9NWF4 448 aa15.86■□□□□ 0.13
ERGIC3-219ENST00000496172 UNC13BO14795 1591 aa15.85■□□□□ 0.13
ERGIC3-219ENST00000496172 MEX3CQ5U5Q3 659 aaKnown RBP15.85■□□□□ 0.13
ERGIC3-219ENST00000496172 NUP155O75694 1391 aa15.84■□□□□ 0.13
ERGIC3-219ENST00000496172 MYO5BQ9ULV0 1848 aa15.83■□□□□ 0.12
ERGIC3-219ENST00000496172 GCC2Q8IWJ2 1684 aa15.82■□□□□ 0.12
ERGIC3-219ENST00000496172 RGS12O14924 1447 aa15.81■□□□□ 0.12
ERGIC3-219ENST00000496172 NHSL1Q5SYE7 1610 aa15.81■□□□□ 0.12
ERGIC3-219ENST00000496172 CADPS2Q86UW7 1296 aa15.81■□□□□ 0.12
ERGIC3-219ENST00000496172 PIK3R4Q99570 1358 aa15.81■□□□□ 0.12
ERGIC3-219ENST00000496172 TMEM131LA2VDJ0 1609 aa15.8■□□□□ 0.12
ERGIC3-219ENST00000496172 DCCP43146 1447 aa15.8■□□□□ 0.12
ERGIC3-219ENST00000496172 SETD5Q9C0A6 1442 aa15.8■□□□□ 0.12
ERGIC3-219ENST00000496172 TBX22Q9Y458 520 aa15.79■□□□□ 0.12
ERGIC3-219ENST00000496172 IQGAP3Q86VI3 1631 aa15.79■□□□□ 0.12
ERGIC3-219ENST00000496172 HDGFP51858 240 aaKnown RBP15.78■□□□□ 0.12
ERGIC3-219ENST00000496172 C19orf44Q9H6X5 657 aa15.78■□□□□ 0.12
ERGIC3-219ENST00000496172 ADAMTS13Q76LX8 1427 aa15.77■□□□□ 0.12
ERGIC3-219ENST00000496172 RIMS2Q9UQ26 1411 aa15.77■□□□□ 0.12
ERGIC3-219ENST00000496172 AFF2P51816 1311 aa15.77■□□□□ 0.12
ERGIC3-219ENST00000496172 ASXL1Q8IXJ9 1541 aa15.77■□□□□ 0.11
ERGIC3-219ENST00000496172 CHGAP10645 457 aaKnown RBP15.76■□□□□ 0.11
ERGIC3-219ENST00000496172 BRINP3Q76B58 766 aa15.75■□□□□ 0.11
ERGIC3-219ENST00000496172 NAIPQ13075 1403 aa15.75■□□□□ 0.11
ERGIC3-219ENST00000496172 E9PCH4 1651 aa15.74■□□□□ 0.11
ERGIC3-219ENST00000496172 ATF3P18847 181 aa15.74■□□□□ 0.11
ERGIC3-219ENST00000496172 RBM6P78332 1123 aaKnown RBP15.74■□□□□ 0.11
ERGIC3-219ENST00000496172 BCANQ96GW7 911 aa15.74■□□□□ 0.11
ERGIC3-219ENST00000496172 TRPM2O94759 1503 aa15.73■□□□□ 0.11
ERGIC3-219ENST00000496172 HFM1A2PYH4 1435 aa15.73■□□□□ 0.11
ERGIC3-219ENST00000496172 XRN1Q8IZH2 1706 aaKnown RBP15.72■□□□□ 0.11
ERGIC3-219ENST00000496172 PPP1R15AO75807 674 aaPredicted RBP15.72■□□□□ 0.11
ERGIC3-219ENST00000496172 ATAD2Q6PL18 1390 aa15.72■□□□□ 0.11
ERGIC3-219ENST00000496172 C14orf37Q86TY3 774 aa15.71■□□□□ 0.11
ERGIC3-219ENST00000496172 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.71■□□□□ 0.11
ERGIC3-219ENST00000496172 MST1RQ04912 1400 aa15.7■□□□□ 0.1
ERGIC3-219ENST00000496172 EP400Q96L91 3159 aa15.7■□□□□ 0.1
ERGIC3-219ENST00000496172 LAMC1P11047 1609 aa15.7■□□□□ 0.1
ERGIC3-219ENST00000496172 FOXD1Q16676 465 aa15.69■□□□□ 0.1
ERGIC3-219ENST00000496172 PNPLA6Q8IY17 1366 aa15.69■□□□□ 0.1
ERGIC3-219ENST00000496172 NUTM2BA6NNL0 878 aaPredicted RBP15.68■□□□□ 0.1
ERGIC3-219ENST00000496172 NUTM2EB1AL46 878 aaPredicted RBP15.68■□□□□ 0.1
ERGIC3-219ENST00000496172 NUTM2AQ8IVF1 878 aaPredicted RBP15.68■□□□□ 0.1
ERGIC3-219ENST00000496172 PTPRUQ92729 1446 aa15.68■□□□□ 0.1
ERGIC3-219ENST00000496172 LRRC59Q96AG4 307 aaKnown RBP15.67■□□□□ 0.1
ERGIC3-219ENST00000496172 QTRT2Q9H974 415 aaKnown RBP15.67■□□□□ 0.1
ERGIC3-219ENST00000496172 SETBP1Q9Y6X0 1596 aa15.66■□□□□ 0.1
ERGIC3-219ENST00000496172 NRXN3Q9Y4C0 1643 aa15.66■□□□□ 0.1
ERGIC3-219ENST00000496172 NGLY1Q96IV0 654 aa15.65■□□□□ 0.1
ERGIC3-219ENST00000496172 SLC4A1APQ9BWU0 796 aaKnown RBP15.65■□□□□ 0.1
ERGIC3-219ENST00000496172 SPHKAPQ2M3C7 1700 aa15.64■□□□□ 0.09
ERGIC3-219ENST00000496172 NUTM2DQ5VT03 806 aaPredicted RBP15.64■□□□□ 0.09
ERGIC3-219ENST00000496172 C8orf37Q96NL8 207 aa15.64■□□□□ 0.09
ERGIC3-219ENST00000496172 ZRANB1Q9UGI0 708 aa15.64■□□□□ 0.09
ERGIC3-219ENST00000496172 ZNF326Q5BKZ1 582 aaKnown RBP15.63■□□□□ 0.09
ERGIC3-219ENST00000496172 ACIN1Q9UKV3 1341 aaKnown RBP15.63■□□□□ 0.09
ERGIC3-219ENST00000496172 AMOTL2Q9Y2J4 779 aa15.62■□□□□ 0.09
ERGIC3-219ENST00000496172 NALCNQ8IZF0 1738 aa15.62■□□□□ 0.09
ERGIC3-219ENST00000496172 ADGRL3Q9HAR2 1447 aa15.61■□□□□ 0.09
ERGIC3-219ENST00000496172 COL22A1Q8NFW1 1626 aaPredicted RBP15.61■□□□□ 0.09
ERGIC3-219ENST00000496172 PTCH1Q13635 1447 aa15.6■□□□□ 0.09
ERGIC3-219ENST00000496172 CCDC125Q86Z20 511 aa15.6■□□□□ 0.09
ERGIC3-219ENST00000496172 LRP5O75197 1615 aa15.6■□□□□ 0.09
ERGIC3-219ENST00000496172 ATRNO75882 1429 aa15.6■□□□□ 0.09
ERGIC3-219ENST00000496172 TRPC5Q9UL62 973 aaPredicted RBP15.58■□□□□ 0.08
ERGIC3-219ENST00000496172 FNBP4Q8N3X1 1017 aaPredicted RBP15.57■□□□□ 0.08
ERGIC3-219ENST00000496172 MPHOSPH9Q99550 1183 aa15.56■□□□□ 0.08
ERGIC3-219ENST00000496172 CLTCL1P53675 1640 aa15.56■□□□□ 0.08
ERGIC3-219ENST00000496172 MARF1Q9Y4F3 1742 aaKnown RBP15.56■□□□□ 0.08
ERGIC3-219ENST00000496172 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.55■□□□□ 0.08
ERGIC3-219ENST00000496172 C1orf167Q5SNV9 1468 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms