RNA–Protein interactions for RNA: ENST00000495666.5

RFTN1-211, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 4

Gene RFTN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-211ENST00000495666 NUP155O75694 1391 aa16.33■□□□□ 0.2
RFTN1-211ENST00000495666 IQGAP3Q86VI3 1631 aa16.33■□□□□ 0.2
RFTN1-211ENST00000495666 KDM5AP29375 1690 aaKnown RBP16.33■□□□□ 0.2
RFTN1-211ENST00000495666 RPRD2Q5VT52 1461 aaKnown RBP16.3■□□□□ 0.2
RFTN1-211ENST00000495666 RIMS2Q9UQ26 1411 aa16.3■□□□□ 0.2
RFTN1-211ENST00000495666 TMEM131LA2VDJ0 1609 aa16.3■□□□□ 0.2
RFTN1-211ENST00000495666 ROCK1Q13464 1354 aa16.29■□□□□ 0.2
RFTN1-211ENST00000495666 SLC52A1Q9NWF4 448 aa16.29■□□□□ 0.2
RFTN1-211ENST00000495666 MED1Q15648 1581 aaPredicted RBP16.29■□□□□ 0.2
RFTN1-211ENST00000495666 PROSER2Q86WR7 435 aaPredicted RBP16.28■□□□□ 0.2
RFTN1-211ENST00000495666 TMEM94Q12767 1356 aa16.26■□□□□ 0.19
RFTN1-211ENST00000495666 SPHKAPQ2M3C7 1700 aa16.26■□□□□ 0.19
RFTN1-211ENST00000495666 ZNF326Q5BKZ1 582 aaKnown RBP16.24■□□□□ 0.19
RFTN1-211ENST00000495666 C14orf37Q86TY3 774 aa16.24■□□□□ 0.19
RFTN1-211ENST00000495666 ZFYVE9O95405 1425 aa16.23■□□□□ 0.19
RFTN1-211ENST00000495666 TRIM52Q96A61 297 aa16.23■□□□□ 0.19
RFTN1-211ENST00000495666 KCNA6P17658 529 aa16.22■□□□□ 0.19
RFTN1-211ENST00000495666 PLEKHG1Q9ULL1 1385 aa16.21■□□□□ 0.19
RFTN1-211ENST00000495666 CHD2O14647 1828 aaKnown RBP16.21■□□□□ 0.19
RFTN1-211ENST00000495666 NWD1Q149M9 1564 aa16.21■□□□□ 0.18
RFTN1-211ENST00000495666 ROBO1Q9Y6N7 1651 aa16.21■□□□□ 0.18
RFTN1-211ENST00000495666 RRBP1Q9P2E9 1410 aaKnown RBP16.19■□□□□ 0.18
RFTN1-211ENST00000495666 HDGFP51858 240 aaKnown RBP16.19■□□□□ 0.18
RFTN1-211ENST00000495666 CLTCL1P53675 1640 aa16.19■□□□□ 0.18
RFTN1-211ENST00000495666 NKTRP30414 1462 aaKnown RBP16.18■□□□□ 0.18
RFTN1-211ENST00000495666 MSH6P52701 1360 aa16.18■□□□□ 0.18
RFTN1-211ENST00000495666 SOCS7O14512 581 aa16.17■□□□□ 0.18
RFTN1-211ENST00000495666 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.17■□□□□ 0.18
RFTN1-211ENST00000495666 NAIPQ13075 1403 aa16.17■□□□□ 0.18
RFTN1-211ENST00000495666 KIF1BO60333 1816 aa16.16■□□□□ 0.18
RFTN1-211ENST00000495666 PHLPP1O60346 1717 aa16.14■□□□□ 0.17
RFTN1-211ENST00000495666 ADAMTS13Q76LX8 1427 aa16.13■□□□□ 0.17
RFTN1-211ENST00000495666 TRPM2O94759 1503 aa16.13■□□□□ 0.17
RFTN1-211ENST00000495666 FOXD1Q16676 465 aa16.12■□□□□ 0.17
RFTN1-211ENST00000495666 DIP2AQ14689 1571 aa16.12■□□□□ 0.17
RFTN1-211ENST00000495666 NRXN3Q9Y4C0 1643 aa16.11■□□□□ 0.17
RFTN1-211ENST00000495666 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.11■□□□□ 0.17
RFTN1-211ENST00000495666 SLC4A1APQ9BWU0 796 aaKnown RBP16.1■□□□□ 0.17
RFTN1-211ENST00000495666 TBX22Q9Y458 520 aa16.1■□□□□ 0.17
RFTN1-211ENST00000495666 AMOTL2Q9Y2J4 779 aa16.09■□□□□ 0.17
RFTN1-211ENST00000495666 PTPRUQ92729 1446 aa16.09■□□□□ 0.17
RFTN1-211ENST00000495666 SLAIN2Q9P270 581 aa16.08■□□□□ 0.16
RFTN1-211ENST00000495666 HFM1A2PYH4 1435 aa16.08■□□□□ 0.16
RFTN1-211ENST00000495666 FAM135BQ49AJ0 1406 aa16.08■□□□□ 0.16
RFTN1-211ENST00000495666 NEXMIFQ5QGS0 1516 aa16.08■□□□□ 0.16
RFTN1-211ENST00000495666 ATF3P18847 181 aa16.07■□□□□ 0.16
RFTN1-211ENST00000495666 METP08581 1390 aa16.05■□□□□ 0.16
RFTN1-211ENST00000495666 SETBP1Q9Y6X0 1596 aa16.04■□□□□ 0.16
RFTN1-211ENST00000495666 XRN1Q8IZH2 1706 aaKnown RBP16.04■□□□□ 0.16
RFTN1-211ENST00000495666 NALCNQ8IZF0 1738 aa16.02■□□□□ 0.15
RFTN1-211ENST00000495666 RGL3Q3MIN7 710 aa16.01■□□□□ 0.15
RFTN1-211ENST00000495666 COL16A1Q07092 1604 aaPredicted RBP16.01■□□□□ 0.15
RFTN1-211ENST00000495666 PIK3R4Q99570 1358 aa16■□□□□ 0.15
RFTN1-211ENST00000495666 PPLO60437 1756 aa16■□□□□ 0.15
RFTN1-211ENST00000495666 CADPS2Q86UW7 1296 aa16■□□□□ 0.15
RFTN1-211ENST00000495666 C19orf44Q9H6X5 657 aa16■□□□□ 0.15
RFTN1-211ENST00000495666 MEX3CQ5U5Q3 659 aaKnown RBP15.99■□□□□ 0.15
RFTN1-211ENST00000495666 NUTM2BA6NNL0 878 aaPredicted RBP15.98■□□□□ 0.15
RFTN1-211ENST00000495666 NUTM2EB1AL46 878 aaPredicted RBP15.98■□□□□ 0.15
RFTN1-211ENST00000495666 NUTM2AQ8IVF1 878 aaPredicted RBP15.98■□□□□ 0.15
RFTN1-211ENST00000495666 DDX17Q92841 729 aaKnown RBP15.98■□□□□ 0.15
RFTN1-211ENST00000495666 RGS17Q9UGC6 210 aaPredicted RBP15.98■□□□□ 0.15
RFTN1-211ENST00000495666 SETD1AO15047 1707 aaKnown RBP15.97■□□□□ 0.15
RFTN1-211ENST00000495666 JCADQ9P266 1359 aa15.97■□□□□ 0.15
RFTN1-211ENST00000495666 CCDC144AA2RUR9 1427 aa15.96■□□□□ 0.15
RFTN1-211ENST00000495666 BRINP3Q76B58 766 aa15.96■□□□□ 0.15
RFTN1-211ENST00000495666 NCOA3Q9Y6Q9 1424 aa15.94■□□□□ 0.14
RFTN1-211ENST00000495666 ASXL1Q8IXJ9 1541 aa15.94■□□□□ 0.14
RFTN1-211ENST00000495666 VGFO15240 615 aaPredicted RBP15.94■□□□□ 0.14
RFTN1-211ENST00000495666 POTEAQ6S8J7 498 aa15.94■□□□□ 0.14
RFTN1-211ENST00000495666 STK26Q9P289 416 aa15.94■□□□□ 0.14
RFTN1-211ENST00000495666 LRP6O75581 1613 aa15.94■□□□□ 0.14
RFTN1-211ENST00000495666 MPHOSPH9Q99550 1183 aa15.93■□□□□ 0.14
RFTN1-211ENST00000495666 AHDC1Q5TGY3 1603 aaPredicted RBP15.93■□□□□ 0.14
RFTN1-211ENST00000495666 MST1RQ04912 1400 aa15.93■□□□□ 0.14
RFTN1-211ENST00000495666 ADGRL3Q9HAR2 1447 aa15.93■□□□□ 0.14
RFTN1-211ENST00000495666 ROBO2Q9HCK4 1378 aa15.91■□□□□ 0.14
RFTN1-211ENST00000495666 SHPRHQ149N8 1683 aa15.91■□□□□ 0.14
RFTN1-211ENST00000495666 ADGRF5Q8IZF2 1346 aa15.91■□□□□ 0.14
RFTN1-211ENST00000495666 NUTM2FA1L443 756 aa15.9■□□□□ 0.14
RFTN1-211ENST00000495666 IFT172Q9UG01 1749 aa15.9■□□□□ 0.14
RFTN1-211ENST00000495666 NHSL1Q5SYE7 1610 aa15.9■□□□□ 0.14
RFTN1-211ENST00000495666 DCCP43146 1447 aa15.89■□□□□ 0.13
RFTN1-211ENST00000495666 SETD5Q9C0A6 1442 aa15.88■□□□□ 0.13
RFTN1-211ENST00000495666 TMEM132EQ6IEE7 984 aa15.88■□□□□ 0.13
RFTN1-211ENST00000495666 RAB3GAP2Q9H2M9 1393 aa15.87■□□□□ 0.13
RFTN1-211ENST00000495666 RPGRIP1LQ68CZ1 1315 aa15.87■□□□□ 0.13
RFTN1-211ENST00000495666 ORAI2Q96SN7 254 aa15.86■□□□□ 0.13
RFTN1-211ENST00000495666 PTCH1Q13635 1447 aa15.85■□□□□ 0.13
RFTN1-211ENST00000495666 SPATA31A6Q5VVP1 1343 aa15.85■□□□□ 0.13
RFTN1-211ENST00000495666 C1orf167Q5SNV9 1468 aa15.84■□□□□ 0.13
RFTN1-211ENST00000495666 WAPLQ7Z5K2 1190 aa15.84■□□□□ 0.13
RFTN1-211ENST00000495666 SPATA31E1Q6ZUB1 1445 aa15.84■□□□□ 0.13
RFTN1-211ENST00000495666 PLEKHG5O94827 1062 aa15.83■□□□□ 0.12
RFTN1-211ENST00000495666 ADAMTS2O95450 1211 aa15.83■□□□□ 0.12
RFTN1-211ENST00000495666 XPCQ01831 940 aaPredicted RBP15.83■□□□□ 0.12
RFTN1-211ENST00000495666 C8orf37Q96NL8 207 aa15.83■□□□□ 0.12
RFTN1-211ENST00000495666 SAFB2Q14151 953 aaKnown RBP eCLIP15.82■□□□□ 0.12
RFTN1-211ENST00000495666 ESCO1Q5FWF5 840 aa15.81■□□□□ 0.12
RFTN1-211ENST00000495666 PLEKHH1Q9ULM0 1364 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms