RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 RSPH4AQ5TD94 716 aa12.44□□□□□ -0.42
NCKAP1-208ENST00000495619 BCAMP50895 628 aa12.43□□□□□ -0.42
NCKAP1-208ENST00000495619 SWT1Q5T5J6 900 aaKnown RBP12.43□□□□□ -0.42
NCKAP1-208ENST00000495619 TMEM134Q9H6X4 195 aa12.43□□□□□ -0.42
NCKAP1-208ENST00000495619 TSR3Q9UJK0 312 aaKnown RBP12.43□□□□□ -0.42
NCKAP1-208ENST00000495619 PPP4CP60510 307 aa12.42□□□□□ -0.42
NCKAP1-208ENST00000495619 NYAP1Q6ZVC0 841 aa12.42□□□□□ -0.42
NCKAP1-208ENST00000495619 CCDC102AQ96A19 550 aa12.42□□□□□ -0.42
NCKAP1-208ENST00000495619 HPS5Q9UPZ3 1129 aa12.41□□□□□ -0.42
NCKAP1-208ENST00000495619 AK7Q96M32 723 aa12.39□□□□□ -0.43
NCKAP1-208ENST00000495619 DAXXQ9UER7 740 aaPredicted RBP12.38□□□□□ -0.43
NCKAP1-208ENST00000495619 SULF1Q8IWU6 871 aa12.37□□□□□ -0.43
NCKAP1-208ENST00000495619 PRR14Q9BWN1 585 aa12.36□□□□□ -0.43
NCKAP1-208ENST00000495619 CLCN1P35523 988 aa12.35□□□□□ -0.43
NCKAP1-208ENST00000495619 WBP1LQ9NX94 342 aa12.34□□□□□ -0.43
NCKAP1-208ENST00000495619 PHOX2BQ99453 314 aa12.32□□□□□ -0.44
NCKAP1-208ENST00000495619 MDM2Q00987 491 aaPredicted RBP12.31□□□□□ -0.44
NCKAP1-208ENST00000495619 SLC24A3Q9HC58 644 aa12.31□□□□□ -0.44
NCKAP1-208ENST00000495619 GPCPD1Q9NPB8 672 aa12.31□□□□□ -0.44
NCKAP1-208ENST00000495619 TTLL12Q14166 644 aaPredicted RBP12.3□□□□□ -0.44
NCKAP1-208ENST00000495619 KMT5BQ4FZB7 885 aa12.3□□□□□ -0.44
NCKAP1-208ENST00000495619 RDH13Q8NBN7 331 aa12.3□□□□□ -0.44
NCKAP1-208ENST00000495619 DDX11L8A8MPP1 907 aa12.29□□□□□ -0.44
NCKAP1-208ENST00000495619 NLRP7Q8WX94 980 aa12.29□□□□□ -0.44
NCKAP1-208ENST00000495619 TRIM66O15016 1216 aa12.28□□□□□ -0.44
NCKAP1-208ENST00000495619 TPRNQ4KMQ1 711 aa12.28□□□□□ -0.44
NCKAP1-208ENST00000495619 AMHR2Q16671 573 aa12.27□□□□□ -0.45
NCKAP1-208ENST00000495619 CFHP08603 1231 aa12.24□□□□□ -0.45
NCKAP1-208ENST00000495619 SLC10A3P09131 477 aa12.22□□□□□ -0.45
NCKAP1-208ENST00000495619 ACTN4O43707 911 aaKnown RBP12.2□□□□□ -0.46
NCKAP1-208ENST00000495619 APLP1P51693 650 aa12.2□□□□□ -0.46
NCKAP1-208ENST00000495619 PDE4DQ08499 809 aa12.2□□□□□ -0.46
NCKAP1-208ENST00000495619 FAM217BQ9NTX9 383 aaPredicted RBP12.2□□□□□ -0.46
NCKAP1-208ENST00000495619 GRIPAP1Q4V328 841 aa12.19□□□□□ -0.46
NCKAP1-208ENST00000495619 PCDHB3Q9Y5E6 796 aa12.19□□□□□ -0.46
NCKAP1-208ENST00000495619 SSTR3P32745 418 aaPredicted RBP12.18□□□□□ -0.46
NCKAP1-208ENST00000495619 GCGRP47871 477 aa12.18□□□□□ -0.46
NCKAP1-208ENST00000495619 GIGYF2Q6Y7W6 1299 aaKnown RBP12.18□□□□□ -0.46
NCKAP1-208ENST00000495619 TMUB1Q9BVT8 246 aa12.18□□□□□ -0.46
NCKAP1-208ENST00000495619 CD46P15529 392 aa12.17□□□□□ -0.46
NCKAP1-208ENST00000495619 PLA2G2EQ9NZK7 142 aa12.17□□□□□ -0.46
NCKAP1-208ENST00000495619 KCNC4Q03721 635 aa12.16□□□□□ -0.46
NCKAP1-208ENST00000495619 IL21Q9HBE4 155 aa12.16□□□□□ -0.46
NCKAP1-208ENST00000495619 PARP9Q8IXQ6 854 aa12.15□□□□□ -0.46
NCKAP1-208ENST00000495619 NUTM1Q86Y26 1132 aa12.14□□□□□ -0.47
NCKAP1-208ENST00000495619 ITGBL1O95965 494 aaPredicted RBP12.13□□□□□ -0.47
NCKAP1-208ENST00000495619 USP46P62068 366 aa12.13□□□□□ -0.47
NCKAP1-208ENST00000495619 MTRQ99707 1265 aa12.13□□□□□ -0.47
NCKAP1-208ENST00000495619 KDM4AO75164 1064 aa12.12□□□□□ -0.47
NCKAP1-208ENST00000495619 NR1I2O75469 434 aa12.12□□□□□ -0.47
NCKAP1-208ENST00000495619 ATP6V1AP38606 617 aa12.12□□□□□ -0.47
NCKAP1-208ENST00000495619 REPIN1Q9BWE0 567 aaKnown RBP12.12□□□□□ -0.47
NCKAP1-208ENST00000495619 COPS2P61201 443 aa12.11□□□□□ -0.47
NCKAP1-208ENST00000495619 DIXDC1Q155Q3 683 aa12.11□□□□□ -0.47
NCKAP1-208ENST00000495619 TJAP1Q5JTD0 557 aa12.1□□□□□ -0.47
NCKAP1-208ENST00000495619 IFFO2Q5TF58 517 aa12.1□□□□□ -0.47
NCKAP1-208ENST00000495619 FUT2Q10981 343 aa12.09□□□□□ -0.47
NCKAP1-208ENST00000495619 BLOC1S3Q6QNY0 202 aa12.08□□□□□ -0.48
NCKAP1-208ENST00000495619 BEGAINQ9BUH8 593 aa12.08□□□□□ -0.48
NCKAP1-208ENST00000495619 ZPR1O75312 459 aa12.06□□□□□ -0.48
NCKAP1-208ENST00000495619 NEUROD2Q15784 382 aa12.04□□□□□ -0.48
NCKAP1-208ENST00000495619 Q3C1V9 767 aa12.04□□□□□ -0.48
NCKAP1-208ENST00000495619 PUS10Q3MIT2 529 aaKnown RBP12.04□□□□□ -0.48
NCKAP1-208ENST00000495619 MS4A1P11836 297 aa12.03□□□□□ -0.48
NCKAP1-208ENST00000495619 MORN1Q5T089 497 aa12.03□□□□□ -0.48
NCKAP1-208ENST00000495619 SCUBE3Q8IX30 993 aa12.03□□□□□ -0.48
NCKAP1-208ENST00000495619 KDM4CQ9H3R0 1056 aa12.03□□□□□ -0.48
NCKAP1-208ENST00000495619 PRKCSHP14314 528 aaPredicted RBP12.02□□□□□ -0.49
NCKAP1-208ENST00000495619 GGCXP38435 758 aa12.02□□□□□ -0.49
NCKAP1-208ENST00000495619 ZNF516Q92618 1163 aa12.01□□□□□ -0.49
NCKAP1-208ENST00000495619 DDRGK1Q96HY6 314 aa12.01□□□□□ -0.49
NCKAP1-208ENST00000495619 HOXA2O43364 376 aa12□□□□□ -0.49
NCKAP1-208ENST00000495619 FMNL1O95466 1100 aaPredicted RBP12□□□□□ -0.49
NCKAP1-208ENST00000495619 SPIRE2Q8WWL2 714 aa12□□□□□ -0.49
NCKAP1-208ENST00000495619 RSPH6AQ9H0K4 717 aa12□□□□□ -0.49
NCKAP1-208ENST00000495619 GPBP1L1Q9HC44 474 aaPredicted RBP11.99□□□□□ -0.49
NCKAP1-208ENST00000495619 SLC27A5Q9Y2P5 690 aa11.99□□□□□ -0.49
NCKAP1-208ENST00000495619 SALL2Q9Y467 1007 aaPredicted RBP11.99□□□□□ -0.49
NCKAP1-208ENST00000495619 TBC1D2Q9BYX2 928 aa11.98□□□□□ -0.49
NCKAP1-208ENST00000495619 SPSB2Q99619 263 aa11.97□□□□□ -0.49
NCKAP1-208ENST00000495619 ADH1BP00325 375 aa11.96□□□□□ -0.49
NCKAP1-208ENST00000495619 FDX1P10109 184 aa11.95□□□□□ -0.5
NCKAP1-208ENST00000495619 GJA5P36382 358 aa11.95□□□□□ -0.5
NCKAP1-208ENST00000495619 A0A0G2JS52 829 aa11.94□□□□□ -0.5
NCKAP1-208ENST00000495619 BRPF1P55201 1214 aaPredicted RBP11.92□□□□□ -0.5
NCKAP1-208ENST00000495619 BRICD5Q6PL45 260 aa11.92□□□□□ -0.5
NCKAP1-208ENST00000495619 NKX2-3Q8TAU0 364 aa11.92□□□□□ -0.5
NCKAP1-208ENST00000495619 MOXD2PA6NHM9 499 aa11.91□□□□□ -0.5
NCKAP1-208ENST00000495619 TLL1O43897 1013 aa11.91□□□□□ -0.5
NCKAP1-208ENST00000495619 SLC6A16Q9GZN6 736 aa11.91□□□□□ -0.5
NCKAP1-208ENST00000495619 ATP1B4Q9UN42 357 aaPredicted RBP11.91□□□□□ -0.5
NCKAP1-208ENST00000495619 RIC3Q7Z5B4 369 aa11.9□□□□□ -0.5
NCKAP1-208ENST00000495619 THAP11Q96EK4 314 aa11.9□□□□□ -0.5
NCKAP1-208ENST00000495619 FAM117AQ9C073 453 aa11.9□□□□□ -0.5
NCKAP1-208ENST00000495619 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.9□□□□□ -0.5
NCKAP1-208ENST00000495619 C6orf229H3BNL8 230 aa11.89□□□□□ -0.51
NCKAP1-208ENST00000495619 NDUFV2P19404 249 aa11.89□□□□□ -0.51
NCKAP1-208ENST00000495619 PPP1R18Q6NYC8 613 aa11.89□□□□□ -0.51
NCKAP1-208ENST00000495619 RSBN1LQ6PCB5 846 aaPredicted RBP11.89□□□□□ -0.51
NCKAP1-208ENST00000495619 USB1Q9BQ65 265 aaKnown RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms