RNA–Protein interactions for RNA: ENST00000495530.5

PTPRE-211, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-211ENST00000495530 UGGT1Q9NYU2 1555 aa21.21■□□□□ 0.99
PTPRE-211ENST00000495530 ZEB1P37275 1124 aaPredicted RBP21.2■□□□□ 0.98
PTPRE-211ENST00000495530 NEUROD1Q13562 356 aa21.19■□□□□ 0.98
PTPRE-211ENST00000495530 SIN3AQ96ST3 1273 aa21.19■□□□□ 0.98
PTPRE-211ENST00000495530 NLRP1Q9C000 1473 aa21.19■□□□□ 0.98
PTPRE-211ENST00000495530 SRCAPQ6ZRS2 3230 aa21.18■□□□□ 0.98
PTPRE-211ENST00000495530 XIRP1Q702N8 1843 aaKnown RBP21.18■□□□□ 0.98
PTPRE-211ENST00000495530 TIMELESSQ9UNS1 1208 aa21.18■□□□□ 0.98
PTPRE-211ENST00000495530 CCDC144AA2RUR9 1427 aa21.18■□□□□ 0.98
PTPRE-211ENST00000495530 SLC52A1Q9NWF4 448 aa21.17■□□□□ 0.98
PTPRE-211ENST00000495530 NOS1P29475 1434 aa21.16■□□□□ 0.98
PTPRE-211ENST00000495530 FBXO31Q5XUX0 539 aaPredicted RBP21.16■□□□□ 0.98
PTPRE-211ENST00000495530 FAM135BQ49AJ0 1406 aa21.15■□□□□ 0.98
PTPRE-211ENST00000495530 UPF1Q92900 1129 aaKnown RBP eCLIP21.15■□□□□ 0.98
PTPRE-211ENST00000495530 MSH5O43196 834 aa21.13■□□□□ 0.97
PTPRE-211ENST00000495530 TRPM2O94759 1503 aa21.13■□□□□ 0.97
PTPRE-211ENST00000495530 ERVK-7P63135 1459 aa21.12■□□□□ 0.97
PTPRE-211ENST00000495530 SPHKAPQ2M3C7 1700 aa21.12■□□□□ 0.97
PTPRE-211ENST00000495530 CFAP65Q6ZU64 1925 aaKnown RBP21.12■□□□□ 0.97
PTPRE-211ENST00000495530 TONSLQ96HA7 1378 aa21.09■□□□□ 0.97
PTPRE-211ENST00000495530 ROBO1Q9Y6N7 1651 aa21.09■□□□□ 0.97
PTPRE-211ENST00000495530 IDI1Q13907 227 aa21.08■□□□□ 0.97
PTPRE-211ENST00000495530 STAG3Q9UJ98 1225 aa21.05■□□□□ 0.96
PTPRE-211ENST00000495530 CHGAP10645 457 aaKnown RBP21.04■□□□□ 0.96
PTPRE-211ENST00000495530 RGL3Q3MIN7 710 aa21.03■□□□□ 0.96
PTPRE-211ENST00000495530 STAC3Q96MF2 364 aa21.03■□□□□ 0.96
PTPRE-211ENST00000495530 CLTCL1P53675 1640 aa21.01■□□□□ 0.95
PTPRE-211ENST00000495530 L3MBTL2Q969R5 705 aa21.01■□□□□ 0.95
PTPRE-211ENST00000495530 RPGRIP1LQ68CZ1 1315 aa21■□□□□ 0.95
PTPRE-211ENST00000495530 PHLPP1O60346 1717 aa20.99■□□□□ 0.95
PTPRE-211ENST00000495530 ZNF326Q5BKZ1 582 aaKnown RBP20.99■□□□□ 0.95
PTPRE-211ENST00000495530 PIK3C2BO00750 1634 aa20.99■□□□□ 0.95
PTPRE-211ENST00000495530 SPATA31E1Q6ZUB1 1445 aa20.98■□□□□ 0.95
PTPRE-211ENST00000495530 KIF1BO60333 1816 aa20.97■□□□□ 0.95
PTPRE-211ENST00000495530 SCAF11Q99590 1463 aaKnown RBP20.97■□□□□ 0.95
PTPRE-211ENST00000495530 DCAF11Q8TEB1 546 aa20.97■□□□□ 0.95
PTPRE-211ENST00000495530 UBR1Q8IWV7 1749 aa20.97■□□□□ 0.95
PTPRE-211ENST00000495530 JCADQ9P266 1359 aa20.97■□□□□ 0.95
PTPRE-211ENST00000495530 PPP1R15AO75807 674 aaPredicted RBP20.96■□□□□ 0.95
PTPRE-211ENST00000495530 HDGFP51858 240 aaKnown RBP20.96■□□□□ 0.95
PTPRE-211ENST00000495530 ZNF772Q68DY9 489 aaPredicted RBP20.95■□□□□ 0.94
PTPRE-211ENST00000495530 VGFO15240 615 aaPredicted RBP20.92■□□□□ 0.94
PTPRE-211ENST00000495530 KDM2AQ9Y2K7 1162 aa20.92■□□□□ 0.94
PTPRE-211ENST00000495530 ADGRB3O60242 1522 aa20.91■□□□□ 0.94
PTPRE-211ENST00000495530 TMEM94Q12767 1356 aa20.9■□□□□ 0.94
PTPRE-211ENST00000495530 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.9■□□□□ 0.94
PTPRE-211ENST00000495530 TMEM131LA2VDJ0 1609 aa20.89■□□□□ 0.94
PTPRE-211ENST00000495530 CDK12Q9NYV4 1490 aaPredicted RBP20.89■□□□□ 0.94
PTPRE-211ENST00000495530 PIAS4Q8N2W9 510 aaPredicted RBP20.89■□□□□ 0.93
PTPRE-211ENST00000495530 SLIT1O75093 1534 aa20.88■□□□□ 0.93
PTPRE-211ENST00000495530 KDM5AP29375 1690 aaKnown RBP20.88■□□□□ 0.93
PTPRE-211ENST00000495530 ARHGAP23Q9P227 1491 aa20.88■□□□□ 0.93
PTPRE-211ENST00000495530 MEX3CQ5U5Q3 659 aaKnown RBP20.87■□□□□ 0.93
PTPRE-211ENST00000495530 SPATA31A6Q5VVP1 1343 aa20.86■□□□□ 0.93
PTPRE-211ENST00000495530 RXRBP28702 533 aa20.86■□□□□ 0.93
PTPRE-211ENST00000495530 LRP6O75581 1613 aa20.86■□□□□ 0.93
PTPRE-211ENST00000495530 COL16A1Q07092 1604 aaPredicted RBP20.86■□□□□ 0.93
PTPRE-211ENST00000495530 TXNDC2Q86VQ3 553 aa20.85■□□□□ 0.93
PTPRE-211ENST00000495530 EID1Q9Y6B2 187 aa20.85■□□□□ 0.93
PTPRE-211ENST00000495530 LTKP29376 864 aa20.84■□□□□ 0.93
PTPRE-211ENST00000495530 POTEDQ86YR6 584 aa20.84■□□□□ 0.93
PTPRE-211ENST00000495530 TMEM2Q9UHN6 1383 aa20.84■□□□□ 0.93
PTPRE-211ENST00000495530 ZFYVE9O95405 1425 aa20.83■□□□□ 0.93
PTPRE-211ENST00000495530 RIMS2Q9UQ26 1411 aa20.82■□□□□ 0.92
PTPRE-211ENST00000495530 MYOM2P54296 1465 aa20.81■□□□□ 0.92
PTPRE-211ENST00000495530 SHPRHQ149N8 1683 aa20.8■□□□□ 0.92
PTPRE-211ENST00000495530 KCNA6P17658 529 aa20.79■□□□□ 0.92
PTPRE-211ENST00000495530 NBPF8Q3BBV2 869 aa20.79■□□□□ 0.92
PTPRE-211ENST00000495530 PROSER2Q86WR7 435 aaPredicted RBP20.79■□□□□ 0.92
PTPRE-211ENST00000495530 MSH6P52701 1360 aa20.79■□□□□ 0.92
PTPRE-211ENST00000495530 ADGRF5Q8IZF2 1346 aa20.78■□□□□ 0.92
PTPRE-211ENST00000495530 NEXMIFQ5QGS0 1516 aa20.78■□□□□ 0.92
PTPRE-211ENST00000495530 NKTRP30414 1462 aaKnown RBP20.78■□□□□ 0.92
PTPRE-211ENST00000495530 NUTM2DQ5VT03 806 aaPredicted RBP20.78■□□□□ 0.92
PTPRE-211ENST00000495530 SLAIN2Q9P270 581 aa20.78■□□□□ 0.92
PTPRE-211ENST00000495530 MYO5BQ9ULV0 1848 aa20.78■□□□□ 0.92
PTPRE-211ENST00000495530 PRAG1Q86YV5 1406 aa20.78■□□□□ 0.92
PTPRE-211ENST00000495530 PPLO60437 1756 aa20.77■□□□□ 0.91
PTPRE-211ENST00000495530 NWD1Q149M9 1564 aa20.74■□□□□ 0.91
PTPRE-211ENST00000495530 IFT172Q9UG01 1749 aa20.74■□□□□ 0.91
PTPRE-211ENST00000495530 NRXN1Q9ULB1 1477 aa20.74■□□□□ 0.91
PTPRE-211ENST00000495530 BCANQ96GW7 911 aa20.73■□□□□ 0.91
PTPRE-211ENST00000495530 C14orf93Q9H972 538 aaKnown RBP20.73■□□□□ 0.91
PTPRE-211ENST00000495530 RBM33Q96EV2 1170 aaKnown RBP20.72■□□□□ 0.91
PTPRE-211ENST00000495530 PIK3C2GO75747 1445 aa20.71■□□□□ 0.91
PTPRE-211ENST00000495530 ZRANB1Q9UGI0 708 aa20.71■□□□□ 0.91
PTPRE-211ENST00000495530 CFAP70Q5T0N1 1121 aa20.7■□□□□ 0.9
PTPRE-211ENST00000495530 PLEKHG1Q9ULL1 1385 aa20.7■□□□□ 0.9
PTPRE-211ENST00000495530 AHDC1Q5TGY3 1603 aaPredicted RBP20.69■□□□□ 0.9
PTPRE-211ENST00000495530 ROCK2O75116 1388 aaKnown RBP20.69■□□□□ 0.9
PTPRE-211ENST00000495530 CARD11Q9BXL7 1154 aa20.68■□□□□ 0.9
PTPRE-211ENST00000495530 RGS12O14924 1447 aa20.68■□□□□ 0.9
PTPRE-211ENST00000495530 NBPF1Q3BBV0 1214 aa20.67■□□□□ 0.9
PTPRE-211ENST00000495530 RALGAPBQ86X10 1494 aa20.67■□□□□ 0.9
PTPRE-211ENST00000495530 SETBP1Q9Y6X0 1596 aa20.65■□□□□ 0.9
PTPRE-211ENST00000495530 AFF2P51816 1311 aa20.65■□□□□ 0.9
PTPRE-211ENST00000495530 ADRA2BP18089 450 aa20.65■□□□□ 0.9
PTPRE-211ENST00000495530 SLC26A8Q96RN1 970 aa20.65■□□□□ 0.9
PTPRE-211ENST00000495530 KIAA1210Q9ULL0 1709 aa20.64■□□□□ 0.9
PTPRE-211ENST00000495530 NUTM2BA6NNL0 878 aaPredicted RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms