RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 MYOM2P54296 1465 aa9.61□□□□□ -0.87
MSH5-217ENST00000494458 LAMC1P11047 1609 aa9.61□□□□□ -0.87
MSH5-217ENST00000494458 SLC52A1Q9NWF4 448 aa9.61□□□□□ -0.87
MSH5-217ENST00000494458 ADGRB3O60242 1522 aa9.61□□□□□ -0.87
MSH5-217ENST00000494458 TRPM1Q7Z4N2 1603 aa9.6□□□□□ -0.87
MSH5-217ENST00000494458 SYNMO15061 1565 aa9.59□□□□□ -0.87
MSH5-217ENST00000494458 ZFYVE9O95405 1425 aa9.59□□□□□ -0.87
MSH5-217ENST00000494458 C11orf95C9JLR9 678 aaPredicted RBP9.59□□□□□ -0.87
MSH5-217ENST00000494458 RGL3Q3MIN7 710 aa9.59□□□□□ -0.87
MSH5-217ENST00000494458 WASHC2AQ641Q2 1341 aa9.58□□□□□ -0.88
MSH5-217ENST00000494458 MADDQ8WXG6 1647 aa9.58□□□□□ -0.88
MSH5-217ENST00000494458 USP47Q96K76 1375 aa9.58□□□□□ -0.88
MSH5-217ENST00000494458 SPATA31D1Q6ZQQ2 1576 aa9.58□□□□□ -0.88
MSH5-217ENST00000494458 UGGT1Q9NYU2 1555 aa9.58□□□□□ -0.88
MSH5-217ENST00000494458 IFT172Q9UG01 1749 aa9.57□□□□□ -0.88
MSH5-217ENST00000494458 KIAA1210Q9ULL0 1709 aa9.57□□□□□ -0.88
MSH5-217ENST00000494458 IDI1Q13907 227 aa9.57□□□□□ -0.88
MSH5-217ENST00000494458 NBPF1Q3BBV0 1214 aa9.57□□□□□ -0.88
MSH5-217ENST00000494458 KDM2AQ9Y2K7 1162 aa9.57□□□□□ -0.88
MSH5-217ENST00000494458 ERVK-7P63135 1459 aa9.57□□□□□ -0.88
MSH5-217ENST00000494458 CCDC7Q96M83 1385 aa9.56□□□□□ -0.88
MSH5-217ENST00000494458 MIER1Q8N108 512 aa9.56□□□□□ -0.88
MSH5-217ENST00000494458 KIF1BO60333 1816 aa9.56□□□□□ -0.88
MSH5-217ENST00000494458 PREX1Q8TCU6 1659 aa9.55□□□□□ -0.88
MSH5-217ENST00000494458 ROCK2O75116 1388 aaKnown RBP9.55□□□□□ -0.88
MSH5-217ENST00000494458 POLA2Q14181 598 aa9.55□□□□□ -0.88
MSH5-217ENST00000494458 HIRIP3Q9BW71 556 aaPredicted RBP9.55□□□□□ -0.88
MSH5-217ENST00000494458 CARD11Q9BXL7 1154 aa9.55□□□□□ -0.88
MSH5-217ENST00000494458 ZMYM3Q14202 1370 aa9.54□□□□□ -0.88
MSH5-217ENST00000494458 DDX10Q13206 875 aaKnown RBP9.54□□□□□ -0.88
MSH5-217ENST00000494458 TESK2Q96S53 571 aa9.54□□□□□ -0.88
MSH5-217ENST00000494458 PIK3C2GO75747 1445 aa9.54□□□□□ -0.88
MSH5-217ENST00000494458 KIF7Q2M1P5 1343 aa9.54□□□□□ -0.88
MSH5-217ENST00000494458 TMEM131LA2VDJ0 1609 aa9.53□□□□□ -0.88
MSH5-217ENST00000494458 MROH2AA6NES4 1674 aa9.53□□□□□ -0.88
MSH5-217ENST00000494458 FBXO31Q5XUX0 539 aaPredicted RBP9.53□□□□□ -0.88
MSH5-217ENST00000494458 C14orf93Q9H972 538 aaKnown RBP9.53□□□□□ -0.88
MSH5-217ENST00000494458 POLR1AO95602 1720 aaPredicted RBP9.53□□□□□ -0.88
MSH5-217ENST00000494458 ADGRF5Q8IZF2 1346 aa9.53□□□□□ -0.88
MSH5-217ENST00000494458 PPLO60437 1756 aa9.52□□□□□ -0.88
MSH5-217ENST00000494458 NEXMIFQ5QGS0 1516 aa9.52□□□□□ -0.88
MSH5-217ENST00000494458 ST20-MTHFSA0A0A6YYL1 179 aa9.52□□□□□ -0.89
MSH5-217ENST00000494458 SETBP1Q9Y6X0 1596 aa9.52□□□□□ -0.89
MSH5-217ENST00000494458 VGFO15240 615 aaPredicted RBP9.51□□□□□ -0.89
MSH5-217ENST00000494458 KCNA4P22459 653 aa9.51□□□□□ -0.89
MSH5-217ENST00000494458 ZNF326Q5BKZ1 582 aaKnown RBP9.51□□□□□ -0.89
MSH5-217ENST00000494458 SCAF11Q99590 1463 aaKnown RBP9.51□□□□□ -0.89
MSH5-217ENST00000494458 CLTCQ00610 1675 aaKnown RBP9.51□□□□□ -0.89
MSH5-217ENST00000494458 ADGRB1O14514 1584 aa9.5□□□□□ -0.89
MSH5-217ENST00000494458 KDM5AP29375 1690 aaKnown RBP9.5□□□□□ -0.89
MSH5-217ENST00000494458 IQGAP1P46940 1657 aa9.5□□□□□ -0.89
MSH5-217ENST00000494458 SBNO2Q9Y2G9 1366 aa9.5□□□□□ -0.89
MSH5-217ENST00000494458 A2ML1A8K2U0 1454 aa9.49□□□□□ -0.89
MSH5-217ENST00000494458 SLC24A1O60721 1099 aa9.49□□□□□ -0.89
MSH5-217ENST00000494458 AKT1S1Q96B36 256 aa9.49□□□□□ -0.89
MSH5-217ENST00000494458 CCER2I3L3R5 266 aa9.48□□□□□ -0.89
MSH5-217ENST00000494458 CFAP70Q5T0N1 1121 aa9.48□□□□□ -0.89
MSH5-217ENST00000494458 CFAP65Q6ZU64 1925 aaKnown RBP9.47□□□□□ -0.89
MSH5-217ENST00000494458 PIP4P2Q8N4L2 257 aa9.47□□□□□ -0.89
MSH5-217ENST00000494458 MYO3AQ8NEV4 1616 aa9.45□□□□□ -0.9
MSH5-217ENST00000494458 PER1O15534 1290 aaPredicted RBP9.45□□□□□ -0.9
MSH5-217ENST00000494458 PUS7Q96PZ0 661 aaKnown RBP9.45□□□□□ -0.9
MSH5-217ENST00000494458 TNRQ92752 1358 aa9.45□□□□□ -0.9
MSH5-217ENST00000494458 NLRP1Q9C000 1473 aa9.45□□□□□ -0.9
MSH5-217ENST00000494458 MLECQ14165 292 aa9.44□□□□□ -0.9
MSH5-217ENST00000494458 EIF3AQ14152 1382 aaKnown RBP9.44□□□□□ -0.9
MSH5-217ENST00000494458 DISP3Q9P2K9 1392 aa9.43□□□□□ -0.9
MSH5-217ENST00000494458 CHGAP10645 457 aaKnown RBP9.43□□□□□ -0.9
MSH5-217ENST00000494458 TMF1P82094 1093 aa9.43□□□□□ -0.9
MSH5-217ENST00000494458 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.43□□□□□ -0.9
MSH5-217ENST00000494458 ESF1Q9H501 851 aaKnown RBP9.43□□□□□ -0.9
MSH5-217ENST00000494458 ASXL1Q8IXJ9 1541 aa9.42□□□□□ -0.9
MSH5-217ENST00000494458 ARHGAP23Q9P227 1491 aa9.42□□□□□ -0.9
MSH5-217ENST00000494458 RIMS2Q9UQ26 1411 aa9.42□□□□□ -0.9
MSH5-217ENST00000494458 ANP32CO43423 234 aa9.42□□□□□ -0.9
MSH5-217ENST00000494458 PRKRIP1Q9H875 184 aaPredicted RBP9.42□□□□□ -0.9
MSH5-217ENST00000494458 MYO5BQ9ULV0 1848 aa9.42□□□□□ -0.9
MSH5-217ENST00000494458 TMEM2Q9UHN6 1383 aa9.41□□□□□ -0.9
MSH5-217ENST00000494458 CDCA8Q53HL2 280 aa9.41□□□□□ -0.9
MSH5-217ENST00000494458 REM2Q8IYK8 340 aaPredicted RBP9.41□□□□□ -0.9
MSH5-217ENST00000494458 SIRT1Q96EB6 747 aa9.41□□□□□ -0.9
MSH5-217ENST00000494458 C3P01024 1663 aa9.41□□□□□ -0.9
MSH5-217ENST00000494458 ADAMTSL3P82987 1691 aa9.41□□□□□ -0.9
MSH5-217ENST00000494458 ALKQ9UM73 1620 aa9.41□□□□□ -0.9
MSH5-217ENST00000494458 SLIT1O75093 1534 aa9.41□□□□□ -0.9
MSH5-217ENST00000494458 PTPRMP28827 1452 aa9.4□□□□□ -0.9
MSH5-217ENST00000494458 KTN1Q86UP2 1357 aaKnown RBP9.4□□□□□ -0.9
MSH5-217ENST00000494458 UBR1Q8IWV7 1749 aa9.4□□□□□ -0.9
MSH5-217ENST00000494458 HDGFP51858 240 aaKnown RBP9.4□□□□□ -0.9
MSH5-217ENST00000494458 MED14O60244 1454 aa9.4□□□□□ -0.91
MSH5-217ENST00000494458 ABCC11Q96J66 1382 aa9.39□□□□□ -0.91
MSH5-217ENST00000494458 HAX1O00165 279 aa9.39□□□□□ -0.91
MSH5-217ENST00000494458 DLC1Q96QB1 1528 aa9.39□□□□□ -0.91
MSH5-217ENST00000494458 SETD1AO15047 1707 aaKnown RBP9.39□□□□□ -0.91
MSH5-217ENST00000494458 NRXN3Q9Y4C0 1643 aa9.38□□□□□ -0.91
MSH5-217ENST00000494458 CENPJQ9HC77 1338 aaPredicted RBP9.38□□□□□ -0.91
MSH5-217ENST00000494458 TMEM132EQ6IEE7 984 aa9.38□□□□□ -0.91
MSH5-217ENST00000494458 TECPR2O15040 1411 aa9.38□□□□□ -0.91
MSH5-217ENST00000494458 YTHDC2Q9H6S0 1430 aaKnown RBP9.38□□□□□ -0.91
MSH5-217ENST00000494458 LRPPRCP42704 1394 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms