RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 ZNF692Q9BU19 519 aaPredicted RBP13.29□□□□□ -0.28
ITGB1-217ENST00000494395 UBR1Q8IWV7 1749 aa13.28□□□□□ -0.28
ITGB1-217ENST00000494395 UGGT1Q9NYU2 1555 aa13.28□□□□□ -0.28
ITGB1-217ENST00000494395 KDM5AP29375 1690 aaKnown RBP13.27□□□□□ -0.29
ITGB1-217ENST00000494395 PIK3C2BO00750 1634 aa13.26□□□□□ -0.29
ITGB1-217ENST00000494395 POLR1AO95602 1720 aaPredicted RBP13.26□□□□□ -0.29
ITGB1-217ENST00000494395 NUP155O75694 1391 aa13.25□□□□□ -0.29
ITGB1-217ENST00000494395 SPDYE2BA6NHP3 402 aa13.25□□□□□ -0.29
ITGB1-217ENST00000494395 SPDYE6P0CI01 402 aa13.25□□□□□ -0.29
ITGB1-217ENST00000494395 SPDYE2Q495Y8 402 aa13.25□□□□□ -0.29
ITGB1-217ENST00000494395 NEURL4Q96JN8 1562 aa13.24□□□□□ -0.29
ITGB1-217ENST00000494395 PTPRTO14522 1441 aa13.24□□□□□ -0.29
ITGB1-217ENST00000494395 ARHGAP23Q9P227 1491 aa13.23□□□□□ -0.29
ITGB1-217ENST00000494395 SPHKAPQ2M3C7 1700 aa13.22□□□□□ -0.29
ITGB1-217ENST00000494395 SLIT1O75093 1534 aa13.22□□□□□ -0.29
ITGB1-217ENST00000494395 MYO5BQ9ULV0 1848 aa13.21□□□□□ -0.29
ITGB1-217ENST00000494395 SSUH2Q9Y2M2 353 aa13.21□□□□□ -0.29
ITGB1-217ENST00000494395 ADGRB3O60242 1522 aa13.21□□□□□ -0.29
ITGB1-217ENST00000494395 NCKAP5LQ9HCH0 1330 aa13.2□□□□□ -0.3
ITGB1-217ENST00000494395 PKD2Q13563 968 aa13.2□□□□□ -0.3
ITGB1-217ENST00000494395 IDI1Q13907 227 aa13.2□□□□□ -0.3
ITGB1-217ENST00000494395 MED14O60244 1454 aa13.2□□□□□ -0.3
ITGB1-217ENST00000494395 THEMISQ8N1K5 641 aaPredicted RBP13.19□□□□□ -0.3
ITGB1-217ENST00000494395 TMEM131LA2VDJ0 1609 aa13.19□□□□□ -0.3
ITGB1-217ENST00000494395 SETD5Q9C0A6 1442 aa13.17□□□□□ -0.3
ITGB1-217ENST00000494395 SLC52A1Q9NWF4 448 aa13.17□□□□□ -0.3
ITGB1-217ENST00000494395 IQGAP1P46940 1657 aa13.17□□□□□ -0.3
ITGB1-217ENST00000494395 IFNLR1Q8IU57 520 aaPredicted RBP13.16□□□□□ -0.3
ITGB1-217ENST00000494395 TRPM2O94759 1503 aa13.16□□□□□ -0.3
ITGB1-217ENST00000494395 LTBP4Q8N2S1 1624 aa13.16□□□□□ -0.3
ITGB1-217ENST00000494395 SCAF11Q99590 1463 aaKnown RBP13.16□□□□□ -0.3
ITGB1-217ENST00000494395 CLTCL1P53675 1640 aa13.15□□□□□ -0.3
ITGB1-217ENST00000494395 TMEM2Q9UHN6 1383 aa13.15□□□□□ -0.3
ITGB1-217ENST00000494395 ANKLE2Q86XL3 938 aa13.14□□□□□ -0.31
ITGB1-217ENST00000494395 RAB3GAP2Q9H2M9 1393 aa13.14□□□□□ -0.31
ITGB1-217ENST00000494395 NPHP4O75161 1426 aaPredicted RBP13.13□□□□□ -0.31
ITGB1-217ENST00000494395 ZFYVE9O95405 1425 aa13.13□□□□□ -0.31
ITGB1-217ENST00000494395 LTKP29376 864 aa13.13□□□□□ -0.31
ITGB1-217ENST00000494395 TRIM52Q96A61 297 aa13.12□□□□□ -0.31
ITGB1-217ENST00000494395 KIF1BO60333 1816 aa13.1□□□□□ -0.31
ITGB1-217ENST00000494395 ACIN1Q9UKV3 1341 aaKnown RBP13.1□□□□□ -0.31
ITGB1-217ENST00000494395 STRCP1A6NGW2 1772 aa13.09□□□□□ -0.31
ITGB1-217ENST00000494395 ZNF335Q9H4Z2 1342 aaPredicted RBP13.09□□□□□ -0.31
ITGB1-217ENST00000494395 RIMS2Q9UQ26 1411 aa13.08□□□□□ -0.32
ITGB1-217ENST00000494395 TXNDC2Q86VQ3 553 aa13.08□□□□□ -0.32
ITGB1-217ENST00000494395 MPHOSPH9Q99550 1183 aa13.08□□□□□ -0.32
ITGB1-217ENST00000494395 STAG3Q9UJ98 1225 aa13.08□□□□□ -0.32
ITGB1-217ENST00000494395 HRCP23327 699 aa13.07□□□□□ -0.32
ITGB1-217ENST00000494395 CERKQ8TCT0 537 aa13.06□□□□□ -0.32
ITGB1-217ENST00000494395 EID1Q9Y6B2 187 aa13.06□□□□□ -0.32
ITGB1-217ENST00000494395 NEXMIFQ5QGS0 1516 aa13.06□□□□□ -0.32
ITGB1-217ENST00000494395 IQSEC2Q5JU85 1478 aa13.05□□□□□ -0.32
ITGB1-217ENST00000494395 PLEKHG1Q9ULL1 1385 aa13.05□□□□□ -0.32
ITGB1-217ENST00000494395 CPS1P31327 1500 aa13.04□□□□□ -0.32
ITGB1-217ENST00000494395 NRXN3Q9Y4C0 1643 aa13.04□□□□□ -0.32
ITGB1-217ENST00000494395 SLC24A1O60721 1099 aa13.04□□□□□ -0.32
ITGB1-217ENST00000494395 PPLO60437 1756 aa13.02□□□□□ -0.32
ITGB1-217ENST00000494395 CHGAP10645 457 aaKnown RBP13.02□□□□□ -0.33
ITGB1-217ENST00000494395 ADAMTS13Q76LX8 1427 aa13.02□□□□□ -0.33
ITGB1-217ENST00000494395 DIP2AQ14689 1571 aa13.02□□□□□ -0.33
ITGB1-217ENST00000494395 NWD1Q149M9 1564 aa13.02□□□□□ -0.33
ITGB1-217ENST00000494395 IFT172Q9UG01 1749 aa13.02□□□□□ -0.33
ITGB1-217ENST00000494395 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.01□□□□□ -0.33
ITGB1-217ENST00000494395 SPATA31E1Q6ZUB1 1445 aa13.01□□□□□ -0.33
ITGB1-217ENST00000494395 SETBP1Q9Y6X0 1596 aa13.01□□□□□ -0.33
ITGB1-217ENST00000494395 XIRP1Q702N8 1843 aaKnown RBP13.01□□□□□ -0.33
ITGB1-217ENST00000494395 CHD2O14647 1828 aaKnown RBP13□□□□□ -0.33
ITGB1-217ENST00000494395 CCDC144AA2RUR9 1427 aa13□□□□□ -0.33
ITGB1-217ENST00000494395 ANKRD30BQ9BXX2 1392 aa12.99□□□□□ -0.33
ITGB1-217ENST00000494395 SETD1AO15047 1707 aaKnown RBP12.99□□□□□ -0.33
ITGB1-217ENST00000494395 LRRC7Q96NW7 1537 aa12.98□□□□□ -0.33
ITGB1-217ENST00000494395 HDGFP51858 240 aaKnown RBP12.98□□□□□ -0.33
ITGB1-217ENST00000494395 FBXO41Q8TF61 875 aa12.98□□□□□ -0.33
ITGB1-217ENST00000494395 SLC26A8Q96RN1 970 aa12.98□□□□□ -0.33
ITGB1-217ENST00000494395 PPP1R15AO75807 674 aaPredicted RBP12.97□□□□□ -0.33
ITGB1-217ENST00000494395 NUTM2DQ5VT03 806 aaPredicted RBP12.97□□□□□ -0.33
ITGB1-217ENST00000494395 ILDR1Q86SU0 546 aaPredicted RBP12.97□□□□□ -0.33
ITGB1-217ENST00000494395 KLHL34Q8N239 644 aa12.97□□□□□ -0.33
ITGB1-217ENST00000494395 ALKQ9UM73 1620 aa12.96□□□□□ -0.33
ITGB1-217ENST00000494395 TBX22Q9Y458 520 aa12.96□□□□□ -0.33
ITGB1-217ENST00000494395 NKTRP30414 1462 aaKnown RBP12.96□□□□□ -0.34
ITGB1-217ENST00000494395 RPGRIP1LQ68CZ1 1315 aa12.95□□□□□ -0.34
ITGB1-217ENST00000494395 ZNF326Q5BKZ1 582 aaKnown RBP12.95□□□□□ -0.34
ITGB1-217ENST00000494395 PLCD3Q8N3E9 789 aa12.95□□□□□ -0.34
ITGB1-217ENST00000494395 XRN1Q8IZH2 1706 aaKnown RBP12.95□□□□□ -0.34
ITGB1-217ENST00000494395 KCNA6P17658 529 aa12.94□□□□□ -0.34
ITGB1-217ENST00000494395 PTPRUQ92729 1446 aa12.94□□□□□ -0.34
ITGB1-217ENST00000494395 PIK3R4Q99570 1358 aa12.94□□□□□ -0.34
ITGB1-217ENST00000494395 TRIM26Q12899 539 aaPredicted RBP12.93□□□□□ -0.34
ITGB1-217ENST00000494395 MIER1Q8N108 512 aa12.92□□□□□ -0.34
ITGB1-217ENST00000494395 SPOCK2Q92563 424 aa12.91□□□□□ -0.34
ITGB1-217ENST00000494395 MYOM2P54296 1465 aa12.91□□□□□ -0.34
ITGB1-217ENST00000494395 NRXN1Q9ULB1 1477 aa12.91□□□□□ -0.34
ITGB1-217ENST00000494395 VGFO15240 615 aaPredicted RBP12.9□□□□□ -0.34
ITGB1-217ENST00000494395 METP08581 1390 aa12.9□□□□□ -0.34
ITGB1-217ENST00000494395 BCANQ96GW7 911 aa12.89□□□□□ -0.35
ITGB1-217ENST00000494395 ADGRF5Q8IZF2 1346 aa12.88□□□□□ -0.35
ITGB1-217ENST00000494395 PIK3C2GO75747 1445 aa12.88□□□□□ -0.35
ITGB1-217ENST00000494395 PRAG1Q86YV5 1406 aa12.88□□□□□ -0.35
ITGB1-217ENST00000494395 ASXL1Q8IXJ9 1541 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms