RNA–Protein interactions for RNA: ENST00000494372.1

UFM1-205, Transcript of ubiquitin fold modifier 1, humanhuman

TSL 2

Gene UFM1, Length 777 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-205ENST00000494372 WBP1LQ9NX94 342 aa12.03□□□□□ -0.48
UFM1-205ENST00000494372 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.03□□□□□ -0.48
UFM1-205ENST00000494372 PDE4DQ08499 809 aa12.02□□□□□ -0.49
UFM1-205ENST00000494372 PLA2G2EQ9NZK7 142 aa12.01□□□□□ -0.49
UFM1-205ENST00000494372 HPS5Q9UPZ3 1129 aa12□□□□□ -0.49
UFM1-205ENST00000494372 RCCD1A6NED2 376 aa11.99□□□□□ -0.49
UFM1-205ENST00000494372 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.98□□□□□ -0.49
UFM1-205ENST00000494372 BRPF1P55201 1214 aaPredicted RBP11.98□□□□□ -0.49
UFM1-205ENST00000494372 TSR3Q9UJK0 312 aaKnown RBP11.98□□□□□ -0.49
UFM1-205ENST00000494372 NLRP7Q8WX94 980 aa11.97□□□□□ -0.49
UFM1-205ENST00000494372 DNAJB2P25686 324 aa11.96□□□□□ -0.49
UFM1-205ENST00000494372 NEUROD2Q15784 382 aa11.96□□□□□ -0.49
UFM1-205ENST00000494372 SWT1Q5T5J6 900 aaKnown RBP11.96□□□□□ -0.49
UFM1-205ENST00000494372 CLCN1P35523 988 aa11.95□□□□□ -0.5
UFM1-205ENST00000494372 MDM2Q00987 491 aaPredicted RBP11.95□□□□□ -0.5
UFM1-205ENST00000494372 TTLL12Q14166 644 aaPredicted RBP11.95□□□□□ -0.5
UFM1-205ENST00000494372 PARP9Q8IXQ6 854 aa11.95□□□□□ -0.5
UFM1-205ENST00000494372 TMUB1Q9BVT8 246 aa11.94□□□□□ -0.5
UFM1-205ENST00000494372 GPCPD1Q9NPB8 672 aa11.94□□□□□ -0.5
UFM1-205ENST00000494372 PPP4CP60510 307 aa11.93□□□□□ -0.5
UFM1-205ENST00000494372 REPIN1Q9BWE0 567 aaKnown RBP11.93□□□□□ -0.5
UFM1-205ENST00000494372 TMEM134Q9H6X4 195 aa11.93□□□□□ -0.5
UFM1-205ENST00000494372 GPBP1L1Q9HC44 474 aaPredicted RBP11.93□□□□□ -0.5
UFM1-205ENST00000494372 DAXXQ9UER7 740 aaPredicted RBP11.92□□□□□ -0.5
UFM1-205ENST00000494372 KDM4CQ9H3R0 1056 aa11.91□□□□□ -0.5
UFM1-205ENST00000494372 RNF40O75150 1001 aa11.9□□□□□ -0.5
UFM1-205ENST00000494372 HDGFP51858 240 aaKnown RBP11.9□□□□□ -0.5
UFM1-205ENST00000494372 GIGYF2Q6Y7W6 1299 aaKnown RBP11.9□□□□□ -0.5
UFM1-205ENST00000494372 NYAP1Q6ZVC0 841 aa11.89□□□□□ -0.51
UFM1-205ENST00000494372 APLP1P51693 650 aa11.86□□□□□ -0.51
UFM1-205ENST00000494372 FAM217BQ9NTX9 383 aaPredicted RBP11.86□□□□□ -0.51
UFM1-205ENST00000494372 ITGBL1O95965 494 aaPredicted RBP11.85□□□□□ -0.51
UFM1-205ENST00000494372 SSTR3P32745 418 aaPredicted RBP11.85□□□□□ -0.51
UFM1-205ENST00000494372 SLF2Q8IX21 1173 aa11.85□□□□□ -0.51
UFM1-205ENST00000494372 MS4A1P11836 297 aa11.84□□□□□ -0.51
UFM1-205ENST00000494372 IFFO2Q5TF58 517 aa11.83□□□□□ -0.52
UFM1-205ENST00000494372 SULF1Q8IWU6 871 aa11.83□□□□□ -0.52
UFM1-205ENST00000494372 DDX11L8A8MPP1 907 aa11.82□□□□□ -0.52
UFM1-205ENST00000494372 SLC4A3P48751 1232 aa11.81□□□□□ -0.52
UFM1-205ENST00000494372 SLC10A3P09131 477 aa11.8□□□□□ -0.52
UFM1-205ENST00000494372 TJAP1Q5JTD0 557 aa11.8□□□□□ -0.52
UFM1-205ENST00000494372 FAM117AQ9C073 453 aa11.8□□□□□ -0.52
UFM1-205ENST00000494372 RSPH4AQ5TD94 716 aa11.79□□□□□ -0.52
UFM1-205ENST00000494372 CD46P15529 392 aa11.78□□□□□ -0.52
UFM1-205ENST00000494372 DDRGK1Q96HY6 314 aa11.78□□□□□ -0.52
UFM1-205ENST00000494372 KCNC4Q03721 635 aa11.77□□□□□ -0.53
UFM1-205ENST00000494372 RDH13Q8NBN7 331 aa11.77□□□□□ -0.53
UFM1-205ENST00000494372 IL27Q8NEV9 243 aa11.77□□□□□ -0.53
UFM1-205ENST00000494372 MTRQ99707 1265 aa11.77□□□□□ -0.53
UFM1-205ENST00000494372 BEGAINQ9BUH8 593 aa11.77□□□□□ -0.53
UFM1-205ENST00000494372 ZNF516Q92618 1163 aa11.75□□□□□ -0.53
UFM1-205ENST00000494372 A0A0G2JS52 829 aa11.74□□□□□ -0.53
UFM1-205ENST00000494372 PLEKHG3A1L390 1219 aa11.74□□□□□ -0.53
UFM1-205ENST00000494372 NECTIN2Q92692 538 aa11.73□□□□□ -0.53
UFM1-205ENST00000494372 CFHP08603 1231 aa11.72□□□□□ -0.53
UFM1-205ENST00000494372 GCGRP47871 477 aa11.72□□□□□ -0.53
UFM1-205ENST00000494372 COPS2P61201 443 aa11.72□□□□□ -0.53
UFM1-205ENST00000494372 IL21Q9HBE4 155 aa11.71□□□□□ -0.53
UFM1-205ENST00000494372 TMEM132AQ24JP5 1023 aa11.7□□□□□ -0.54
UFM1-205ENST00000494372 NKX2-3Q8TAU0 364 aa11.69□□□□□ -0.54
UFM1-205ENST00000494372 ACTN4O43707 911 aaKnown RBP11.68□□□□□ -0.54
UFM1-205ENST00000494372 BLOC1S3Q6QNY0 202 aa11.68□□□□□ -0.54
UFM1-205ENST00000494372 PCDHB3Q9Y5E6 796 aa11.68□□□□□ -0.54
UFM1-205ENST00000494372 KDM4AO75164 1064 aa11.67□□□□□ -0.54
UFM1-205ENST00000494372 DIXDC1Q155Q3 683 aa11.67□□□□□ -0.54
UFM1-205ENST00000494372 NUTM1Q86Y26 1132 aa11.67□□□□□ -0.54
UFM1-205ENST00000494372 SPIRE2Q8WWL2 714 aa11.67□□□□□ -0.54
UFM1-205ENST00000494372 TBC1D2Q9BYX2 928 aa11.67□□□□□ -0.54
UFM1-205ENST00000494372 KMT5BQ4FZB7 885 aa11.66□□□□□ -0.54
UFM1-205ENST00000494372 PRR14Q9BWN1 585 aa11.66□□□□□ -0.54
UFM1-205ENST00000494372 RSPH6AQ9H0K4 717 aa11.66□□□□□ -0.54
UFM1-205ENST00000494372 ZPR1O75312 459 aa11.64□□□□□ -0.55
UFM1-205ENST00000494372 USP46P62068 366 aa11.63□□□□□ -0.55
UFM1-205ENST00000494372 FUT2Q10981 343 aa11.62□□□□□ -0.55
UFM1-205ENST00000494372 PUS10Q3MIT2 529 aaKnown RBP11.62□□□□□ -0.55
UFM1-205ENST00000494372 SH3D19Q5HYK7 790 aa11.62□□□□□ -0.55
UFM1-205ENST00000494372 MYSM1Q5VVJ2 828 aa11.62□□□□□ -0.55
UFM1-205ENST00000494372 GOPCQ9HD26 462 aa11.62□□□□□ -0.55
UFM1-205ENST00000494372 SKIV2LQ15477 1246 aaKnown RBP11.6□□□□□ -0.55
UFM1-205ENST00000494372 PPP1R18Q6NYC8 613 aa11.6□□□□□ -0.55
UFM1-205ENST00000494372 HOXA2O43364 376 aa11.59□□□□□ -0.55
UFM1-205ENST00000494372 TLL1O43897 1013 aa11.59□□□□□ -0.55
UFM1-205ENST00000494372 ATP6V1AP38606 617 aa11.59□□□□□ -0.55
UFM1-205ENST00000494372 GRIPAP1Q4V328 841 aa11.59□□□□□ -0.55
UFM1-205ENST00000494372 MOXD2PA6NHM9 499 aa11.58□□□□□ -0.56
UFM1-205ENST00000494372 POLR3EQ9NVU0 708 aa11.58□□□□□ -0.56
UFM1-205ENST00000494372 NDUFV2P19404 249 aa11.57□□□□□ -0.56
UFM1-205ENST00000494372 RIC3Q7Z5B4 369 aa11.57□□□□□ -0.56
UFM1-205ENST00000494372 SPTLC1O15269 473 aa11.56□□□□□ -0.56
UFM1-205ENST00000494372 GJA5P36382 358 aa11.56□□□□□ -0.56
UFM1-205ENST00000494372 RSBN1LQ6PCB5 846 aaPredicted RBP11.56□□□□□ -0.56
UFM1-205ENST00000494372 SCUBE3Q8IX30 993 aa11.56□□□□□ -0.56
UFM1-205ENST00000494372 RGS20O76081 388 aa11.55□□□□□ -0.56
UFM1-205ENST00000494372 CLK2P49760 499 aaKnown RBP11.55□□□□□ -0.56
UFM1-205ENST00000494372 MORN1Q5T089 497 aa11.55□□□□□ -0.56
UFM1-205ENST00000494372 HLA-CQ95604 372 aa11.55□□□□□ -0.56
UFM1-205ENST00000494372 PCMTD1Q96MG8 357 aaPredicted RBP11.54□□□□□ -0.56
UFM1-205ENST00000494372 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.54□□□□□ -0.56
UFM1-205ENST00000494372 LIMD1Q9UGP4 676 aa11.54□□□□□ -0.56
UFM1-205ENST00000494372 NR1I2O75469 434 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms