RNA–Protein interactions for RNA: ENST00000494300.1

NXF3-206, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 543 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-206ENST00000494300 CCDC141Q6ZP82 1450 aa9.08□□□□□ -0.96
NXF3-206ENST00000494300 FRMPD1Q5SYB0 1578 aa9.07□□□□□ -0.96
NXF3-206ENST00000494300 HECW2Q9P2P5 1572 aa9.07□□□□□ -0.96
NXF3-206ENST00000494300 TTLL13PA6NNM8 815 aa9.07□□□□□ -0.96
NXF3-206ENST00000494300 ARHGEF40Q8TER5 1519 aa9.06□□□□□ -0.96
NXF3-206ENST00000494300 ARHGEF12Q9NZN5 1544 aa9.06□□□□□ -0.96
NXF3-206ENST00000494300 RIOK3O14730 519 aaKnown RBP9.06□□□□□ -0.96
NXF3-206ENST00000494300 ATP10AO60312 1499 aa9.06□□□□□ -0.96
NXF3-206ENST00000494300 MLH3Q9UHC1 1453 aa9.06□□□□□ -0.96
NXF3-206ENST00000494300 KDM5CP41229 1560 aa9.06□□□□□ -0.96
NXF3-206ENST00000494300 C9orf84Q5VXU9 1444 aa9.05□□□□□ -0.96
NXF3-206ENST00000494300 YEATS2Q9ULM3 1422 aa9.05□□□□□ -0.96
NXF3-206ENST00000494300 PTPN23Q9H3S7 1636 aa9.05□□□□□ -0.96
NXF3-206ENST00000494300 PSEN1P49768 467 aa9.05□□□□□ -0.96
NXF3-206ENST00000494300 ATN1P54259 1190 aaPredicted RBP9.05□□□□□ -0.96
NXF3-206ENST00000494300 PDAP1Q13442 181 aaKnown RBP9.05□□□□□ -0.96
NXF3-206ENST00000494300 RNF25Q96BH1 459 aaPredicted RBP9.05□□□□□ -0.96
NXF3-206ENST00000494300 ESF1Q9H501 851 aaKnown RBP9.05□□□□□ -0.96
NXF3-206ENST00000494300 ATP7AQ04656 1500 aa9.04□□□□□ -0.96
NXF3-206ENST00000494300 ARHGEF5Q12774 1597 aa9.03□□□□□ -0.96
NXF3-206ENST00000494300 MBD5Q9P267 1494 aa9.03□□□□□ -0.96
NXF3-206ENST00000494300 MLECQ14165 292 aa9.03□□□□□ -0.96
NXF3-206ENST00000494300 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.03□□□□□ -0.96
NXF3-206ENST00000494300 RTEL1-TNFRSF6BF6WH68 1400 aa9.03□□□□□ -0.96
NXF3-206ENST00000494300 TCOF1Q13428 1488 aaKnown RBP9.02□□□□□ -0.96
NXF3-206ENST00000494300 CHGAP10645 457 aaKnown RBP9.02□□□□□ -0.97
NXF3-206ENST00000494300 ITGAEP38570 1179 aa9.02□□□□□ -0.97
NXF3-206ENST00000494300 TRIM35Q9UPQ4 493 aa9.02□□□□□ -0.97
NXF3-206ENST00000494300 ANKRD30AQ9BXX3 1397 aa9.01□□□□□ -0.97
NXF3-206ENST00000494300 VGFO15240 615 aaPredicted RBP9.01□□□□□ -0.97
NXF3-206ENST00000494300 DAPK1P53355 1430 aa9.01□□□□□ -0.97
NXF3-206ENST00000494300 NEUROD2Q15784 382 aa9.01□□□□□ -0.97
NXF3-206ENST00000494300 ARID3AQ99856 593 aa9.01□□□□□ -0.97
NXF3-206ENST00000494300 A2MP01023 1474 aa9.01□□□□□ -0.97
NXF3-206ENST00000494300 INO80Q9ULG1 1556 aaPredicted RBP9□□□□□ -0.97
NXF3-206ENST00000494300 DIP2CQ9Y2E4 1556 aa9□□□□□ -0.97
NXF3-206ENST00000494300 PDIA4P13667 645 aaKnown RBP9□□□□□ -0.97
NXF3-206ENST00000494300 LMOD2Q6P5Q4 547 aa9□□□□□ -0.97
NXF3-206ENST00000494300 CHIC2Q9UKJ5 165 aa9□□□□□ -0.97
NXF3-206ENST00000494300 SHANK2Q9UPX8 1470 aa9□□□□□ -0.97
NXF3-206ENST00000494300 ABCC5O15440 1437 aa8.99□□□□□ -0.97
NXF3-206ENST00000494300 ABCA6Q8N139 1617 aa8.99□□□□□ -0.97
NXF3-206ENST00000494300 GOLGA2Q08379 1002 aa8.99□□□□□ -0.97
NXF3-206ENST00000494300 SLC39A7Q92504 469 aa8.99□□□□□ -0.97
NXF3-206ENST00000494300 RRP7BPQ9NSQ0 103 aa8.99□□□□□ -0.97
NXF3-206ENST00000494300 KIDINS220Q9ULH0 1771 aa8.99□□□□□ -0.97
NXF3-206ENST00000494300 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.99□□□□□ -0.97
NXF3-206ENST00000494300 DNMT1P26358 1616 aaKnown RBP8.98□□□□□ -0.97
NXF3-206ENST00000494300 REREQ9P2R6 1566 aa8.98□□□□□ -0.97
NXF3-206ENST00000494300 MAST1Q9Y2H9 1570 aa8.98□□□□□ -0.97
NXF3-206ENST00000494300 DHX29Q7Z478 1369 aaKnown RBP8.98□□□□□ -0.97
NXF3-206ENST00000494300 KIF15Q9NS87 1388 aa8.98□□□□□ -0.97
NXF3-206ENST00000494300 ADGBQ8N7X0 1667 aa8.97□□□□□ -0.97
NXF3-206ENST00000494300 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.97□□□□□ -0.97
NXF3-206ENST00000494300 KIF3BO15066 747 aa8.97□□□□□ -0.97
NXF3-206ENST00000494300 HMGB1P09429 215 aaKnown RBP8.97□□□□□ -0.97
NXF3-206ENST00000494300 C7P10643 843 aa8.97□□□□□ -0.97
NXF3-206ENST00000494300 GGT6Q6P531 493 aa8.97□□□□□ -0.97
NXF3-206ENST00000494300 ZFP91Q96JP5 570 aaPredicted RBP8.97□□□□□ -0.97
NXF3-206ENST00000494300 METRNQ9UJH8 293 aa8.97□□□□□ -0.97
NXF3-206ENST00000494300 RRBP1Q9P2E9 1410 aaKnown RBP8.97□□□□□ -0.97
NXF3-206ENST00000494300 AGLP35573 1532 aa8.96□□□□□ -0.97
NXF3-206ENST00000494300 KDM4FA0A1W2PPD8 638 aa8.96□□□□□ -0.98
NXF3-206ENST00000494300 CDK11BP21127 795 aaKnown RBP8.96□□□□□ -0.98
NXF3-206ENST00000494300 DUOX2Q9NRD8 1548 aa8.95□□□□□ -0.98
NXF3-206ENST00000494300 PLXNC1O60486 1568 aa8.95□□□□□ -0.98
NXF3-206ENST00000494300 CROCC2H7BZ55 1655 aa8.95□□□□□ -0.98
NXF3-206ENST00000494300 HSP90B1P14625 803 aaKnown RBP8.95□□□□□ -0.98
NXF3-206ENST00000494300 CABP2Q9NPB3 220 aa8.95□□□□□ -0.98
NXF3-206ENST00000494300 CNTLNQ9NXG0 1405 aa8.95□□□□□ -0.98
NXF3-206ENST00000494300 BCORL1Q5H9F3 1711 aa8.94□□□□□ -0.98
NXF3-206ENST00000494300 SEC24BO95487 1268 aa8.94□□□□□ -0.98
NXF3-206ENST00000494300 MKRN3Q13064 507 aaKnown RBP8.94□□□□□ -0.98
NXF3-206ENST00000494300 KANK1Q14678 1352 aa8.94□□□□□ -0.98
NXF3-206ENST00000494300 ERBINQ96RT1 1412 aa8.94□□□□□ -0.98
NXF3-206ENST00000494300 STK25O00506 426 aa8.93□□□□□ -0.98
NXF3-206ENST00000494300 IER5LQ5T953 404 aa8.93□□□□□ -0.98
NXF3-206ENST00000494300 PUS7Q96PZ0 661 aaKnown RBP8.93□□□□□ -0.98
NXF3-206ENST00000494300 WASHC2CQ9Y4E1 1318 aa8.93□□□□□ -0.98
NXF3-206ENST00000494300 ROCK1Q13464 1354 aa8.93□□□□□ -0.98
NXF3-206ENST00000494300 NCOA1Q15788 1441 aa8.93□□□□□ -0.98
NXF3-206ENST00000494300 ADGRL2O95490 1459 aa8.93□□□□□ -0.98
NXF3-206ENST00000494300 MADDQ8WXG6 1647 aa8.92□□□□□ -0.98
NXF3-206ENST00000494300 HS6ST3Q8IZP7 471 aa8.92□□□□□ -0.98
NXF3-206ENST00000494300 RGS22Q8NE09 1264 aa8.92□□□□□ -0.98
NXF3-206ENST00000494300 CHMP4AQ9BY43 222 aa8.92□□□□□ -0.98
NXF3-206ENST00000494300 BCL11BQ9C0K0 894 aaPredicted RBP8.92□□□□□ -0.98
NXF3-206ENST00000494300 STK24Q9Y6E0 443 aa8.92□□□□□ -0.98
NXF3-206ENST00000494300 ADAMTSL3P82987 1691 aa8.91□□□□□ -0.98
NXF3-206ENST00000494300 PTPRMP28827 1452 aa8.91□□□□□ -0.98
NXF3-206ENST00000494300 ANKRD50Q9ULJ7 1429 aa8.91□□□□□ -0.98
NXF3-206ENST00000494300 FER1L4A9Z1Z3 1794 aa8.91□□□□□ -0.98
NXF3-206ENST00000494300 EIF2AK4Q9P2K8 1649 aaKnown RBP8.91□□□□□ -0.98
NXF3-206ENST00000494300 RIMS1Q86UR5 1692 aaKnown RBP8.9□□□□□ -0.98
NXF3-206ENST00000494300 PLCG2P16885 1265 aa8.89□□□□□ -0.99
NXF3-206ENST00000494300 KDM5DQ9BY66 1539 aa8.89□□□□□ -0.99
NXF3-206ENST00000494300 FAM135AQ9P2D6 1515 aa8.89□□□□□ -0.99
NXF3-206ENST00000494300 PTPRKQ15262 1439 aa8.88□□□□□ -0.99
NXF3-206ENST00000494300 SIGLEC1Q9BZZ2 1709 aa8.88□□□□□ -0.99
NXF3-206ENST00000494300 EFCAB3Q8N7B9 438 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms