RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 RBM46Q8TBY0 533 aaKnown RBP5.18□□□□□ -1.58
CDC42EP3-205ENST00000494083 SMYD5Q6GMV2 418 aa5.18□□□□□ -1.58
CDC42EP3-205ENST00000494083 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.17□□□□□ -1.58
CDC42EP3-205ENST00000494083 TLL1O43897 1013 aa5.16□□□□□ -1.58
CDC42EP3-205ENST00000494083 LMOD2Q6P5Q4 547 aa5.16□□□□□ -1.58
CDC42EP3-205ENST00000494083 A0A0G2JS52 829 aa5.15□□□□□ -1.58
CDC42EP3-205ENST00000494083 CFHP08603 1231 aa5.15□□□□□ -1.58
CDC42EP3-205ENST00000494083 NYAP1Q6ZVC0 841 aa5.15□□□□□ -1.58
CDC42EP3-205ENST00000494083 PUS10Q3MIT2 529 aaKnown RBP5.15□□□□□ -1.59
CDC42EP3-205ENST00000494083 BLOC1S3Q6QNY0 202 aa5.15□□□□□ -1.59
CDC42EP3-205ENST00000494083 SLF2Q8IX21 1173 aa5.15□□□□□ -1.59
CDC42EP3-205ENST00000494083 HDGFP51858 240 aaKnown RBP5.14□□□□□ -1.59
CDC42EP3-205ENST00000494083 KCNC4Q03721 635 aa5.14□□□□□ -1.59
CDC42EP3-205ENST00000494083 CCDC102AQ96A19 550 aa5.13□□□□□ -1.59
CDC42EP3-205ENST00000494083 DDX11L8A8MPP1 907 aa5.13□□□□□ -1.59
CDC42EP3-205ENST00000494083 OATP04181 439 aa5.13□□□□□ -1.59
CDC42EP3-205ENST00000494083 PCDHB3Q9Y5E6 796 aa5.12□□□□□ -1.59
CDC42EP3-205ENST00000494083 MAP2K5Q13163 448 aa5.12□□□□□ -1.59
CDC42EP3-205ENST00000494083 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.12□□□□□ -1.59
CDC42EP3-205ENST00000494083 IFFO2Q5TF58 517 aa5.12□□□□□ -1.59
CDC42EP3-205ENST00000494083 REPIN1Q9BWE0 567 aaKnown RBP5.11□□□□□ -1.59
CDC42EP3-205ENST00000494083 IRF6O14896 467 aa5.11□□□□□ -1.59
CDC42EP3-205ENST00000494083 MDM2Q00987 491 aaPredicted RBP5.11□□□□□ -1.59
CDC42EP3-205ENST00000494083 FUT2Q10981 343 aa5.11□□□□□ -1.59
CDC42EP3-205ENST00000494083 PPP1R18Q6NYC8 613 aa5.11□□□□□ -1.59
CDC42EP3-205ENST00000494083 RDH13Q8NBN7 331 aa5.11□□□□□ -1.59
CDC42EP3-205ENST00000494083 HLA-CQ95604 372 aa5.11□□□□□ -1.59
CDC42EP3-205ENST00000494083 IL21Q9HBE4 155 aa5.1□□□□□ -1.59
CDC42EP3-205ENST00000494083 ZC3H15Q8WU90 426 aaKnown RBP5.1□□□□□ -1.59
CDC42EP3-205ENST00000494083 ZPR1O75312 459 aa5.1□□□□□ -1.59
CDC42EP3-205ENST00000494083 TULP1O00294 542 aaPredicted RBP5.09□□□□□ -1.59
CDC42EP3-205ENST00000494083 ACTN4O43707 911 aaKnown RBP5.09□□□□□ -1.6
CDC42EP3-205ENST00000494083 DAXXQ9UER7 740 aaPredicted RBP5.09□□□□□ -1.6
CDC42EP3-205ENST00000494083 PPEF1O14829 653 aaPredicted RBP5.08□□□□□ -1.6
CDC42EP3-205ENST00000494083 SLC24A1O60721 1099 aa5.07□□□□□ -1.6
CDC42EP3-205ENST00000494083 SLC4A3P48751 1232 aa5.07□□□□□ -1.6
CDC42EP3-205ENST00000494083 ZMYND10O75800 440 aa5.07□□□□□ -1.6
CDC42EP3-205ENST00000494083 S1PR4O95977 384 aa5.07□□□□□ -1.6
CDC42EP3-205ENST00000494083 SCUBE3Q8IX30 993 aa5.07□□□□□ -1.6
CDC42EP3-205ENST00000494083 EMID1Q96A84 441 aaPredicted RBP5.07□□□□□ -1.6
CDC42EP3-205ENST00000494083 PRDM9Q9NQV7 894 aa5.07□□□□□ -1.6
CDC42EP3-205ENST00000494083 GUCA2AQ02747 115 aa5.06□□□□□ -1.6
CDC42EP3-205ENST00000494083 MINK1Q8N4C8 1332 aaPredicted RBP5.06□□□□□ -1.6
CDC42EP3-205ENST00000494083 KMT5BQ4FZB7 885 aa5.06□□□□□ -1.6
CDC42EP3-205ENST00000494083 SLC27A5Q9Y2P5 690 aa5.06□□□□□ -1.6
CDC42EP3-205ENST00000494083 RNF223E7ERA6 249 aa5.06□□□□□ -1.6
CDC42EP3-205ENST00000494083 RNF19BQ6ZMZ0 732 aa5.06□□□□□ -1.6
CDC42EP3-205ENST00000494083 PLA2G2CQ5R387 149 aa5.05□□□□□ -1.6
CDC42EP3-205ENST00000494083 PRKD2Q9BZL6 878 aa5.05□□□□□ -1.6
CDC42EP3-205ENST00000494083 GCGRP47871 477 aa5.05□□□□□ -1.6
CDC42EP3-205ENST00000494083 CD46P15529 392 aa5.05□□□□□ -1.6
CDC42EP3-205ENST00000494083 BARGINQ6ZT62 677 aa5.05□□□□□ -1.6
CDC42EP3-205ENST00000494083 MORN1Q5T089 497 aa5.04□□□□□ -1.6
CDC42EP3-205ENST00000494083 KRI1Q8N9T8 703 aaKnown RBP5.04□□□□□ -1.6
CDC42EP3-205ENST00000494083 TTLL12Q14166 644 aaPredicted RBP5.03□□□□□ -1.6
CDC42EP3-205ENST00000494083 NECTIN2Q92692 538 aa5.03□□□□□ -1.6
CDC42EP3-205ENST00000494083 PRR14Q9BWN1 585 aa5.03□□□□□ -1.6
CDC42EP3-205ENST00000494083 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.03□□□□□ -1.6
CDC42EP3-205ENST00000494083 DCAF1Q9Y4B6 1507 aa5.03□□□□□ -1.6
CDC42EP3-205ENST00000494083 FAM217BQ9NTX9 383 aaPredicted RBP5.03□□□□□ -1.6
CDC42EP3-205ENST00000494083 SULF1Q8IWU6 871 aa5.03□□□□□ -1.6
CDC42EP3-205ENST00000494083 SYMPKQ92797 1274 aaKnown RBP5.03□□□□□ -1.6
CDC42EP3-205ENST00000494083 GPCPD1Q9NPB8 672 aa5.03□□□□□ -1.6
CDC42EP3-205ENST00000494083 THAP11Q96EK4 314 aa5.02□□□□□ -1.61
CDC42EP3-205ENST00000494083 TMUB1Q9BVT8 246 aa5.02□□□□□ -1.61
CDC42EP3-205ENST00000494083 PARP9Q8IXQ6 854 aa5.02□□□□□ -1.61
CDC42EP3-205ENST00000494083 SPSB2Q99619 263 aa5.02□□□□□ -1.61
CDC42EP3-205ENST00000494083 LCE2BO14633 110 aa5.01□□□□□ -1.61
CDC42EP3-205ENST00000494083 ATP6V1AP38606 617 aa5.01□□□□□ -1.61
CDC42EP3-205ENST00000494083 GIGYF2Q6Y7W6 1299 aaKnown RBP5.01□□□□□ -1.61
CDC42EP3-205ENST00000494083 SLC24A3Q9HC58 644 aa5.01□□□□□ -1.61
CDC42EP3-205ENST00000494083 ADH1BP00325 375 aa5.01□□□□□ -1.61
CDC42EP3-205ENST00000494083 KDM4AO75164 1064 aa5.01□□□□□ -1.61
CDC42EP3-205ENST00000494083 FAM160A2Q8N612 972 aaPredicted RBP5.01□□□□□ -1.61
CDC42EP3-205ENST00000494083 NR1I2O75469 434 aa5□□□□□ -1.61
CDC42EP3-205ENST00000494083 IRX2Q9BZI1 471 aaPredicted RBP5□□□□□ -1.61
CDC42EP3-205ENST00000494083 MS4A1P11836 297 aa5□□□□□ -1.61
CDC42EP3-205ENST00000494083 CLCN1P35523 988 aa5□□□□□ -1.61
CDC42EP3-205ENST00000494083 HOXA2O43364 376 aa5□□□□□ -1.61
CDC42EP3-205ENST00000494083 TRIM67Q6ZTA4 783 aa5□□□□□ -1.61
CDC42EP3-205ENST00000494083 TRIM66O15016 1216 aa4.99□□□□□ -1.61
CDC42EP3-205ENST00000494083 SLC6A16Q9GZN6 736 aa4.99□□□□□ -1.61
CDC42EP3-205ENST00000494083 FCF1Q9Y324 198 aaKnown RBP4.99□□□□□ -1.61
CDC42EP3-205ENST00000494083 AMHR2Q16671 573 aa4.99□□□□□ -1.61
CDC42EP3-205ENST00000494083 LIAT1Q6ZQX7 453 aa4.99□□□□□ -1.61
CDC42EP3-205ENST00000494083 SSTR3P32745 418 aaPredicted RBP4.99□□□□□ -1.61
CDC42EP3-205ENST00000494083 RSPH4AQ5TD94 716 aa4.99□□□□□ -1.61
CDC42EP3-205ENST00000494083 PCDHGC3Q9UN70 934 aa4.98□□□□□ -1.61
CDC42EP3-205ENST00000494083 BRICD5Q6PL45 260 aa4.98□□□□□ -1.61
CDC42EP3-205ENST00000494083 NDUFV2P19404 249 aa4.97□□□□□ -1.61
CDC42EP3-205ENST00000494083 TNFRSF10AO00220 468 aa4.97□□□□□ -1.61
CDC42EP3-205ENST00000494083 ANKLE1Q8NAG6 615 aa4.97□□□□□ -1.61
CDC42EP3-205ENST00000494083 BEGAINQ9BUH8 593 aa4.97□□□□□ -1.61
CDC42EP3-205ENST00000494083 ZCCHC6Q5VYS8 1495 aaKnown RBP4.97□□□□□ -1.61
CDC42EP3-205ENST00000494083 MOXD2PA6NHM9 499 aa4.97□□□□□ -1.61
CDC42EP3-205ENST00000494083 RGS20O76081 388 aa4.96□□□□□ -1.61
CDC42EP3-205ENST00000494083 GGCXP38435 758 aa4.96□□□□□ -1.61
CDC42EP3-205ENST00000494083 SLC19A1P41440 591 aa4.96□□□□□ -1.62
CDC42EP3-205ENST00000494083 SPIRE2Q8WWL2 714 aa4.96□□□□□ -1.62
CDC42EP3-205ENST00000494083 GPBP1L1Q9HC44 474 aaPredicted RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms