RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 KRI1Q8N9T8 703 aaKnown RBP10.28□□□□□ -0.76
ITGB1-216ENST00000493758 TMUB1Q9BVT8 246 aa10.28□□□□□ -0.76
ITGB1-216ENST00000493758 SLC4A3P48751 1232 aa10.27□□□□□ -0.77
ITGB1-216ENST00000493758 BCAMP50895 628 aa10.27□□□□□ -0.77
ITGB1-216ENST00000493758 HDGFP51858 240 aaKnown RBP10.27□□□□□ -0.77
ITGB1-216ENST00000493758 HCSTQ9UBK5 93 aa10.27□□□□□ -0.77
ITGB1-216ENST00000493758 DAXXQ9UER7 740 aaPredicted RBP10.27□□□□□ -0.77
ITGB1-216ENST00000493758 TSR3Q9UJK0 312 aaKnown RBP10.27□□□□□ -0.77
ITGB1-216ENST00000493758 TRIM66O15016 1216 aa10.25□□□□□ -0.77
ITGB1-216ENST00000493758 CLCN1P35523 988 aa10.25□□□□□ -0.77
ITGB1-216ENST00000493758 SLC24A3Q9HC58 644 aa10.24□□□□□ -0.77
ITGB1-216ENST00000493758 GPCPD1Q9NPB8 672 aa10.24□□□□□ -0.77
ITGB1-216ENST00000493758 SULF1Q8IWU6 871 aa10.23□□□□□ -0.77
ITGB1-216ENST00000493758 HPS5Q9UPZ3 1129 aa10.23□□□□□ -0.77
ITGB1-216ENST00000493758 TPRNQ4KMQ1 711 aa10.22□□□□□ -0.77
ITGB1-216ENST00000493758 PRR14Q9BWN1 585 aa10.21□□□□□ -0.77
ITGB1-216ENST00000493758 MDM2Q00987 491 aaPredicted RBP10.2□□□□□ -0.78
ITGB1-216ENST00000493758 PARP9Q8IXQ6 854 aa10.2□□□□□ -0.78
ITGB1-216ENST00000493758 WBP1LQ9NX94 342 aa10.2□□□□□ -0.78
ITGB1-216ENST00000493758 PPP4CP60510 307 aa10.19□□□□□ -0.78
ITGB1-216ENST00000493758 NLRP7Q8WX94 980 aa10.19□□□□□ -0.78
ITGB1-216ENST00000493758 PLSCR2Q9NRY7 297 aa10.19□□□□□ -0.78
ITGB1-216ENST00000493758 FAM217BQ9NTX9 383 aaPredicted RBP10.19□□□□□ -0.78
ITGB1-216ENST00000493758 SLC10A3P09131 477 aa10.18□□□□□ -0.78
ITGB1-216ENST00000493758 RSPH4AQ5TD94 716 aa10.18□□□□□ -0.78
ITGB1-216ENST00000493758 CD46P15529 392 aa10.17□□□□□ -0.78
ITGB1-216ENST00000493758 PDE4DQ08499 809 aa10.17□□□□□ -0.78
ITGB1-216ENST00000493758 TTLL12Q14166 644 aaPredicted RBP10.16□□□□□ -0.78
ITGB1-216ENST00000493758 REPIN1Q9BWE0 567 aaKnown RBP10.16□□□□□ -0.78
ITGB1-216ENST00000493758 RNF40O75150 1001 aa10.15□□□□□ -0.78
ITGB1-216ENST00000493758 PTPN5P54829 565 aa10.15□□□□□ -0.78
ITGB1-216ENST00000493758 GIGYF2Q6Y7W6 1299 aaKnown RBP10.15□□□□□ -0.78
ITGB1-216ENST00000493758 CFHP08603 1231 aa10.14□□□□□ -0.79
ITGB1-216ENST00000493758 APLP1P51693 650 aa10.14□□□□□ -0.79
ITGB1-216ENST00000493758 DDX11L8A8MPP1 907 aa10.13□□□□□ -0.79
ITGB1-216ENST00000493758 ACTN4O43707 911 aaKnown RBP10.13□□□□□ -0.79
ITGB1-216ENST00000493758 ITGBL1O95965 494 aaPredicted RBP10.13□□□□□ -0.79
ITGB1-216ENST00000493758 KMT5BQ4FZB7 885 aa10.13□□□□□ -0.79
ITGB1-216ENST00000493758 GCGRP47871 477 aa10.11□□□□□ -0.79
ITGB1-216ENST00000493758 IFFO2Q5TF58 517 aa10.11□□□□□ -0.79
ITGB1-216ENST00000493758 RDH13Q8NBN7 331 aa10.1□□□□□ -0.79
ITGB1-216ENST00000493758 SSTR3P32745 418 aaPredicted RBP10.09□□□□□ -0.79
ITGB1-216ENST00000493758 USP46P62068 366 aa10.08□□□□□ -0.8
ITGB1-216ENST00000493758 MS4A1P11836 297 aa10.07□□□□□ -0.8
ITGB1-216ENST00000493758 TJAP1Q5JTD0 557 aa10.05□□□□□ -0.8
ITGB1-216ENST00000493758 PCDHB3Q9Y5E6 796 aa10.05□□□□□ -0.8
ITGB1-216ENST00000493758 KDM4AO75164 1064 aa10.04□□□□□ -0.8
ITGB1-216ENST00000493758 PRKCSHP14314 528 aaPredicted RBP10.04□□□□□ -0.8
ITGB1-216ENST00000493758 MTRQ99707 1265 aa10.04□□□□□ -0.8
ITGB1-216ENST00000493758 KDM4CQ9H3R0 1056 aa10.04□□□□□ -0.8
ITGB1-216ENST00000493758 FUT2Q10981 343 aa10.03□□□□□ -0.8
ITGB1-216ENST00000493758 DIXDC1Q155Q3 683 aa10.03□□□□□ -0.8
ITGB1-216ENST00000493758 IL21Q9HBE4 155 aa10.03□□□□□ -0.8
ITGB1-216ENST00000493758 GJA5P36382 358 aa10.02□□□□□ -0.81
ITGB1-216ENST00000493758 ATP6V1AP38606 617 aa10.02□□□□□ -0.81
ITGB1-216ENST00000493758 BRPF1P55201 1214 aaPredicted RBP10.02□□□□□ -0.81
ITGB1-216ENST00000493758 MORN1Q5T089 497 aa10.02□□□□□ -0.81
ITGB1-216ENST00000493758 BEGAINQ9BUH8 593 aa10.02□□□□□ -0.81
ITGB1-216ENST00000493758 HOXA2O43364 376 aa10.01□□□□□ -0.81
ITGB1-216ENST00000493758 GRIPAP1Q4V328 841 aa10.01□□□□□ -0.81
ITGB1-216ENST00000493758 GPBP1L1Q9HC44 474 aaPredicted RBP10.01□□□□□ -0.81
ITGB1-216ENST00000493758 NR1I2O75469 434 aa10□□□□□ -0.81
ITGB1-216ENST00000493758 BLOC1S3Q6QNY0 202 aa10□□□□□ -0.81
ITGB1-216ENST00000493758 DDRGK1Q96HY6 314 aa10□□□□□ -0.81
ITGB1-216ENST00000493758 SALL2Q9Y467 1007 aaPredicted RBP10□□□□□ -0.81
ITGB1-216ENST00000493758 KCNC4Q03721 635 aa9.99□□□□□ -0.81
ITGB1-216ENST00000493758 SPIRE2Q8WWL2 714 aa9.99□□□□□ -0.81
ITGB1-216ENST00000493758 PLA2G2EQ9NZK7 142 aa9.98□□□□□ -0.81
ITGB1-216ENST00000493758 ZPR1O75312 459 aa9.97□□□□□ -0.81
ITGB1-216ENST00000493758 NEUROD2Q15784 382 aa9.97□□□□□ -0.81
ITGB1-216ENST00000493758 NUTM1Q86Y26 1132 aa9.97□□□□□ -0.81
ITGB1-216ENST00000493758 TBC1D2Q9BYX2 928 aa9.96□□□□□ -0.82
ITGB1-216ENST00000493758 COPS2P61201 443 aa9.95□□□□□ -0.82
ITGB1-216ENST00000493758 TUSC1Q2TAM9 212 aa9.95□□□□□ -0.82
ITGB1-216ENST00000493758 THAP11Q96EK4 314 aa9.95□□□□□ -0.82
ITGB1-216ENST00000493758 Q3C1V9 767 aa9.94□□□□□ -0.82
ITGB1-216ENST00000493758 PUS10Q3MIT2 529 aaKnown RBP9.94□□□□□ -0.82
ITGB1-216ENST00000493758 SCUBE3Q8IX30 993 aa9.94□□□□□ -0.82
ITGB1-216ENST00000493758 SLC27A5Q9Y2P5 690 aa9.94□□□□□ -0.82
ITGB1-216ENST00000493758 PLEKHG3A1L390 1219 aa9.93□□□□□ -0.82
ITGB1-216ENST00000493758 FAM117AQ9C073 453 aa9.93□□□□□ -0.82
ITGB1-216ENST00000493758 RSPH6AQ9H0K4 717 aa9.93□□□□□ -0.82
ITGB1-216ENST00000493758 SPTLC1O15269 473 aa9.92□□□□□ -0.82
ITGB1-216ENST00000493758 ADH1BP00325 375 aa9.92□□□□□ -0.82
ITGB1-216ENST00000493758 SH3D19Q5HYK7 790 aa9.92□□□□□ -0.82
ITGB1-216ENST00000493758 MYSM1Q5VVJ2 828 aa9.92□□□□□ -0.82
ITGB1-216ENST00000493758 RSBN1LQ6PCB5 846 aaPredicted RBP9.92□□□□□ -0.82
ITGB1-216ENST00000493758 ZNF516Q92618 1163 aa9.92□□□□□ -0.82
ITGB1-216ENST00000493758 GOPCQ9HD26 462 aa9.92□□□□□ -0.82
ITGB1-216ENST00000493758 A0A0G2JS52 829 aa9.91□□□□□ -0.82
ITGB1-216ENST00000493758 MOXD2PA6NHM9 499 aa9.91□□□□□ -0.82
ITGB1-216ENST00000493758 MSS51Q4VC12 460 aa9.9□□□□□ -0.82
ITGB1-216ENST00000493758 BRICD5Q6PL45 260 aa9.9□□□□□ -0.82
ITGB1-216ENST00000493758 TLL1O43897 1013 aa9.89□□□□□ -0.83
ITGB1-216ENST00000493758 FMNL1O95466 1100 aaPredicted RBP9.89□□□□□ -0.83
ITGB1-216ENST00000493758 FDX1P10109 184 aa9.89□□□□□ -0.83
ITGB1-216ENST00000493758 HLA-CQ95604 372 aa9.89□□□□□ -0.83
ITGB1-216ENST00000493758 PRPF38BQ5VTL8 546 aaKnown RBP9.88□□□□□ -0.83
ITGB1-216ENST00000493758 PCDHGC3Q9UN70 934 aa9.88□□□□□ -0.83
ITGB1-216ENST00000493758 RNF19BQ6ZMZ0 732 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms