RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 SPHKAPQ2M3C7 1700 aa17.98■□□□□ 0.47
SNX17-208ENST00000493711 FOXD4L1Q9NU39 408 aa17.98■□□□□ 0.47
SNX17-208ENST00000493711 SYNMO15061 1565 aa17.98■□□□□ 0.47
SNX17-208ENST00000493711 NEUROD1Q13562 356 aa17.97■□□□□ 0.47
SNX17-208ENST00000493711 STAC3Q96MF2 364 aa17.97■□□□□ 0.47
SNX17-208ENST00000493711 SIN3AQ96ST3 1273 aa17.96■□□□□ 0.47
SNX17-208ENST00000493711 UHRF1BP1Q6BDS2 1440 aa17.96■□□□□ 0.47
SNX17-208ENST00000493711 RPGRIP1LQ68CZ1 1315 aa17.96■□□□□ 0.46
SNX17-208ENST00000493711 MYCNP04198 464 aaPredicted RBP17.95■□□□□ 0.46
SNX17-208ENST00000493711 CHGAP10645 457 aaKnown RBP17.95■□□□□ 0.46
SNX17-208ENST00000493711 THEMISQ8N1K5 641 aaPredicted RBP17.95■□□□□ 0.46
SNX17-208ENST00000493711 NEURL4Q96JN8 1562 aa17.95■□□□□ 0.46
SNX17-208ENST00000493711 A2ML1A8K2U0 1454 aa17.95■□□□□ 0.46
SNX17-208ENST00000493711 PIK3C2BO00750 1634 aa17.94■□□□□ 0.46
SNX17-208ENST00000493711 HDGFP51858 240 aaKnown RBP17.94■□□□□ 0.46
SNX17-208ENST00000493711 CLTCL1P53675 1640 aa17.93■□□□□ 0.46
SNX17-208ENST00000493711 TONSLQ96HA7 1378 aa17.92■□□□□ 0.46
SNX17-208ENST00000493711 SPATA31E1Q6ZUB1 1445 aa17.92■□□□□ 0.46
SNX17-208ENST00000493711 UGGT1Q9NYU2 1555 aa17.91■□□□□ 0.46
SNX17-208ENST00000493711 ZNF326Q5BKZ1 582 aaKnown RBP17.91■□□□□ 0.46
SNX17-208ENST00000493711 ADGRB3O60242 1522 aa17.9■□□□□ 0.46
SNX17-208ENST00000493711 ZEB1P37275 1124 aaPredicted RBP17.9■□□□□ 0.46
SNX17-208ENST00000493711 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.9■□□□□ 0.46
SNX17-208ENST00000493711 RGL3Q3MIN7 710 aa17.89■□□□□ 0.45
SNX17-208ENST00000493711 KDM5AP29375 1690 aaKnown RBP17.88■□□□□ 0.45
SNX17-208ENST00000493711 DSG3P32926 999 aa17.88■□□□□ 0.45
SNX17-208ENST00000493711 CEP170BQ9Y4F5 1589 aaPredicted RBP17.87■□□□□ 0.45
SNX17-208ENST00000493711 MYO3AQ8NEV4 1616 aa17.87■□□□□ 0.45
SNX17-208ENST00000493711 VGFO15240 615 aaPredicted RBP17.87■□□□□ 0.45
SNX17-208ENST00000493711 SAMD1Q6SPF0 538 aaPredicted RBP17.87■□□□□ 0.45
SNX17-208ENST00000493711 SETD1BQ9UPS6 1966 aaKnown RBP17.86■□□□□ 0.45
SNX17-208ENST00000493711 L3MBTL2Q969R5 705 aa17.86■□□□□ 0.45
SNX17-208ENST00000493711 EID1Q9Y6B2 187 aa17.86■□□□□ 0.45
SNX17-208ENST00000493711 TMEM2Q9UHN6 1383 aa17.86■□□□□ 0.45
SNX17-208ENST00000493711 TMEM131LA2VDJ0 1609 aa17.85■□□□□ 0.45
SNX17-208ENST00000493711 DCAF11Q8TEB1 546 aa17.84■□□□□ 0.45
SNX17-208ENST00000493711 ZFYVE9O95405 1425 aa17.83■□□□□ 0.45
SNX17-208ENST00000493711 ZNF142P52746 1687 aaPredicted RBP17.83■□□□□ 0.44
SNX17-208ENST00000493711 RIMS2Q9UQ26 1411 aa17.82■□□□□ 0.44
SNX17-208ENST00000493711 PPP1R15AO75807 674 aaPredicted RBP17.82■□□□□ 0.44
SNX17-208ENST00000493711 ANKLE2Q86XL3 938 aa17.82■□□□□ 0.44
SNX17-208ENST00000493711 CFAP65Q6ZU64 1925 aaKnown RBP17.82■□□□□ 0.44
SNX17-208ENST00000493711 SLIT1O75093 1534 aa17.82■□□□□ 0.44
SNX17-208ENST00000493711 ARHGAP23Q9P227 1491 aa17.82■□□□□ 0.44
SNX17-208ENST00000493711 KIF1BO60333 1816 aa17.82■□□□□ 0.44
SNX17-208ENST00000493711 TXNDC2Q86VQ3 553 aa17.8■□□□□ 0.44
SNX17-208ENST00000493711 MYOM2P54296 1465 aa17.8■□□□□ 0.44
SNX17-208ENST00000493711 UBR1Q8IWV7 1749 aa17.79■□□□□ 0.44
SNX17-208ENST00000493711 ABCB7O75027 752 aa17.79■□□□□ 0.44
SNX17-208ENST00000493711 KDM2AQ9Y2K7 1162 aa17.79■□□□□ 0.44
SNX17-208ENST00000493711 NEXMIFQ5QGS0 1516 aa17.77■□□□□ 0.43
SNX17-208ENST00000493711 SCAF11Q99590 1463 aaKnown RBP17.75■□□□□ 0.43
SNX17-208ENST00000493711 PLEKHG1Q9ULL1 1385 aa17.75■□□□□ 0.43
SNX17-208ENST00000493711 LTKP29376 864 aa17.74■□□□□ 0.43
SNX17-208ENST00000493711 ZNF219Q9P2Y4 722 aaPredicted RBP17.74■□□□□ 0.43
SNX17-208ENST00000493711 NRXN1Q9ULB1 1477 aa17.74■□□□□ 0.43
SNX17-208ENST00000493711 ADGRF5Q8IZF2 1346 aa17.73■□□□□ 0.43
SNX17-208ENST00000493711 PRAG1Q86YV5 1406 aa17.72■□□□□ 0.43
SNX17-208ENST00000493711 NUTM2DQ5VT03 806 aaPredicted RBP17.71■□□□□ 0.43
SNX17-208ENST00000493711 BCANQ96GW7 911 aa17.71■□□□□ 0.43
SNX17-208ENST00000493711 ATF5Q9Y2D1 282 aaPredicted RBP17.71■□□□□ 0.43
SNX17-208ENST00000493711 PIK3C2GO75747 1445 aa17.71■□□□□ 0.43
SNX17-208ENST00000493711 C14orf93Q9H972 538 aaKnown RBP17.7■□□□□ 0.42
SNX17-208ENST00000493711 MED14O60244 1454 aa17.69■□□□□ 0.42
SNX17-208ENST00000493711 STRCQ7RTU9 1775 aa17.69■□□□□ 0.42
SNX17-208ENST00000493711 NPHP4O75161 1426 aaPredicted RBP17.68■□□□□ 0.42
SNX17-208ENST00000493711 TBX22Q9Y458 520 aa17.68■□□□□ 0.42
SNX17-208ENST00000493711 NCKAP5LQ9HCH0 1330 aa17.68■□□□□ 0.42
SNX17-208ENST00000493711 PPLO60437 1756 aa17.67■□□□□ 0.42
SNX17-208ENST00000493711 NBPF8Q3BBV2 869 aa17.66■□□□□ 0.42
SNX17-208ENST00000493711 IFT172Q9UG01 1749 aa17.66■□□□□ 0.42
SNX17-208ENST00000493711 SETBP1Q9Y6X0 1596 aa17.66■□□□□ 0.42
SNX17-208ENST00000493711 CFAP70Q5T0N1 1121 aa17.64■□□□□ 0.41
SNX17-208ENST00000493711 IQSEC2Q5JU85 1478 aa17.63■□□□□ 0.41
SNX17-208ENST00000493711 MYO5BQ9ULV0 1848 aa17.63■□□□□ 0.41
SNX17-208ENST00000493711 DIP2AQ14689 1571 aa17.63■□□□□ 0.41
SNX17-208ENST00000493711 ROCK2O75116 1388 aaKnown RBP17.63■□□□□ 0.41
SNX17-208ENST00000493711 PIK3R4Q99570 1358 aa17.63■□□□□ 0.41
SNX17-208ENST00000493711 RALGAPBQ86X10 1494 aa17.63■□□□□ 0.41
SNX17-208ENST00000493711 LTBP4Q8N2S1 1624 aa17.62■□□□□ 0.41
SNX17-208ENST00000493711 GPRASP1Q5JY77 1395 aa17.62■□□□□ 0.41
SNX17-208ENST00000493711 ADAMTS13Q76LX8 1427 aa17.62■□□□□ 0.41
SNX17-208ENST00000493711 SLC26A8Q96RN1 970 aa17.61■□□□□ 0.41
SNX17-208ENST00000493711 LAMC1P11047 1609 aa17.61■□□□□ 0.41
SNX17-208ENST00000493711 ALKQ9UM73 1620 aa17.6■□□□□ 0.41
SNX17-208ENST00000493711 CARD11Q9BXL7 1154 aa17.59■□□□□ 0.41
SNX17-208ENST00000493711 KIAA1210Q9ULL0 1709 aa17.58■□□□□ 0.4
SNX17-208ENST00000493711 NBPF1Q3BBV0 1214 aa17.57■□□□□ 0.4
SNX17-208ENST00000493711 LRPPRCP42704 1394 aaKnown RBP17.56■□□□□ 0.4
SNX17-208ENST00000493711 POLR1AO95602 1720 aaPredicted RBP17.56■□□□□ 0.4
SNX17-208ENST00000493711 UBAP1LF5GYI3 381 aa17.56■□□□□ 0.4
SNX17-208ENST00000493711 METP08581 1390 aa17.55■□□□□ 0.4
SNX17-208ENST00000493711 ABCC11Q96J66 1382 aa17.55■□□□□ 0.4
SNX17-208ENST00000493711 IQGAP1P46940 1657 aa17.55■□□□□ 0.4
SNX17-208ENST00000493711 TMEM132EQ6IEE7 984 aa17.55■□□□□ 0.4
SNX17-208ENST00000493711 SIRT1Q96EB6 747 aa17.55■□□□□ 0.4
SNX17-208ENST00000493711 EIF3AQ14152 1382 aaKnown RBP17.54■□□□□ 0.4
SNX17-208ENST00000493711 NRXN3Q9Y4C0 1643 aa17.54■□□□□ 0.4
SNX17-208ENST00000493711 KCNA6P17658 529 aa17.54■□□□□ 0.4
SNX17-208ENST00000493711 YTHDC2Q9H6S0 1430 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms