RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 MYOM2P54296 1465 aa31.31■■■□□ 2.6
PSPC1-204ENST00000492741 PPLO60437 1756 aa31.3■■■□□ 2.6
PSPC1-204ENST00000492741 SETD1BQ9UPS6 1966 aaKnown RBP31.3■■■□□ 2.6
PSPC1-204ENST00000492741 NEXMIFQ5QGS0 1516 aa31.3■■■□□ 2.6
PSPC1-204ENST00000492741 IFT172Q9UG01 1749 aa31.3■■■□□ 2.6
PSPC1-204ENST00000492741 THEMISQ8N1K5 641 aaPredicted RBP31.29■■■□□ 2.6
PSPC1-204ENST00000492741 UBR1Q8IWV7 1749 aa31.29■■■□□ 2.6
PSPC1-204ENST00000492741 KDM5AP29375 1690 aaKnown RBP31.29■■■□□ 2.6
PSPC1-204ENST00000492741 RIMS2Q9UQ26 1411 aa31.28■■■□□ 2.6
PSPC1-204ENST00000492741 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.27■■■□□ 2.6
PSPC1-204ENST00000492741 CEP170BQ9Y4F5 1589 aaPredicted RBP31.25■■■□□ 2.59
PSPC1-204ENST00000492741 TMEM2Q9UHN6 1383 aa31.25■■■□□ 2.59
PSPC1-204ENST00000492741 ROCK2O75116 1388 aaKnown RBP31.23■■■□□ 2.59
PSPC1-204ENST00000492741 SENP3Q9H4L4 574 aaPredicted RBP31.23■■■□□ 2.59
PSPC1-204ENST00000492741 RALGAPBQ86X10 1494 aa31.22■■■□□ 2.59
PSPC1-204ENST00000492741 ZFYVE9O95405 1425 aa31.21■■■□□ 2.59
PSPC1-204ENST00000492741 EID1Q9Y6B2 187 aa31.21■■■□□ 2.59
PSPC1-204ENST00000492741 CARD11Q9BXL7 1154 aa31.2■■■□□ 2.58
PSPC1-204ENST00000492741 NRXN1Q9ULB1 1477 aa31.2■■■□□ 2.58
PSPC1-204ENST00000492741 NBPF1Q3BBV0 1214 aa31.19■■■□□ 2.58
PSPC1-204ENST00000492741 CFAP70Q5T0N1 1121 aa31.19■■■□□ 2.58
PSPC1-204ENST00000492741 TXNDC2Q86VQ3 553 aa31.18■■■□□ 2.58
PSPC1-204ENST00000492741 TRPM1Q7Z4N2 1603 aa31.18■■■□□ 2.58
PSPC1-204ENST00000492741 PIK3C2GO75747 1445 aa31.18■■■□□ 2.58
PSPC1-204ENST00000492741 BCANQ96GW7 911 aa31.16■■■□□ 2.58
PSPC1-204ENST00000492741 ZNF142P52746 1687 aaPredicted RBP31.16■■■□□ 2.58
PSPC1-204ENST00000492741 EIF4G2P78344 907 aaKnown RBP eCLIP31.13■■■□□ 2.57
PSPC1-204ENST00000492741 C14orf93Q9H972 538 aaKnown RBP31.13■■■□□ 2.57
PSPC1-204ENST00000492741 LTKP29376 864 aa31.12■■■□□ 2.57
PSPC1-204ENST00000492741 SLIT1O75093 1534 aa31.12■■■□□ 2.57
PSPC1-204ENST00000492741 ARHGAP23Q9P227 1491 aa31.1■■■□□ 2.57
PSPC1-204ENST00000492741 ANKLE2Q86XL3 938 aa31.08■■■□□ 2.57
PSPC1-204ENST00000492741 HIRIP3Q9BW71 556 aaPredicted RBP31.08■■■□□ 2.57
PSPC1-204ENST00000492741 KIAA1210Q9ULL0 1709 aa31.08■■■□□ 2.57
PSPC1-204ENST00000492741 GPRASP1Q5JY77 1395 aa31.07■■■□□ 2.57
PSPC1-204ENST00000492741 ZNF316A6NFI3 1004 aaPredicted RBP31.07■■■□□ 2.56
PSPC1-204ENST00000492741 HSPA5P11021 654 aaKnown RBP31.07■■■□□ 2.56
PSPC1-204ENST00000492741 USP47Q96K76 1375 aa31.05■■■□□ 2.56
PSPC1-204ENST00000492741 TMEM132EQ6IEE7 984 aa31.04■■■□□ 2.56
PSPC1-204ENST00000492741 SCAF11Q99590 1463 aaKnown RBP31.04■■■□□ 2.56
PSPC1-204ENST00000492741 PLEKHG1Q9ULL1 1385 aa31.03■■■□□ 2.56
PSPC1-204ENST00000492741 LAMC1P11047 1609 aa31.01■■■□□ 2.55
PSPC1-204ENST00000492741 ALKQ9UM73 1620 aa31■■■□□ 2.55
PSPC1-204ENST00000492741 SETBP1Q9Y6X0 1596 aa30.98■■■□□ 2.55
PSPC1-204ENST00000492741 ST20-MTHFSA0A0A6YYL1 179 aa30.95■■■□□ 2.54
PSPC1-204ENST00000492741 HSPA2P54652 639 aa30.95■■■□□ 2.54
PSPC1-204ENST00000492741 SLC26A8Q96RN1 970 aa30.95■■■□□ 2.54
PSPC1-204ENST00000492741 TRAK1Q9UPV9 953 aa30.94■■■□□ 2.54
PSPC1-204ENST00000492741 IQGAP1P46940 1657 aa30.93■■■□□ 2.54
PSPC1-204ENST00000492741 STK26Q9P289 416 aa30.93■■■□□ 2.54
PSPC1-204ENST00000492741 ADGRB1O14514 1584 aa30.93■■■□□ 2.54
PSPC1-204ENST00000492741 NCKAP5LQ9HCH0 1330 aa30.92■■■□□ 2.54
PSPC1-204ENST00000492741 NRXN3Q9Y4C0 1643 aa30.92■■■□□ 2.54
PSPC1-204ENST00000492741 EIF3AQ14152 1382 aaKnown RBP30.92■■■□□ 2.54
PSPC1-204ENST00000492741 LMTK3Q96Q04 1460 aa30.9■■■□□ 2.54
PSPC1-204ENST00000492741 ADAMTS13Q76LX8 1427 aa30.9■■■□□ 2.54
PSPC1-204ENST00000492741 TBX22Q9Y458 520 aa30.88■■■□□ 2.53
PSPC1-204ENST00000492741 METP08581 1390 aa30.88■■■□□ 2.53
PSPC1-204ENST00000492741 ASXL1Q8IXJ9 1541 aa30.87■■■□□ 2.53
PSPC1-204ENST00000492741 YTHDC2Q9H6S0 1430 aaKnown RBP30.86■■■□□ 2.53
PSPC1-204ENST00000492741 NPHP4O75161 1426 aaPredicted RBP30.85■■■□□ 2.53
PSPC1-204ENST00000492741 SETD1AO15047 1707 aaKnown RBP30.84■■■□□ 2.53
PSPC1-204ENST00000492741 POLR1AO95602 1720 aaPredicted RBP30.83■■■□□ 2.53
PSPC1-204ENST00000492741 MED14O60244 1454 aa30.82■■■□□ 2.52
PSPC1-204ENST00000492741 LRPPRCP42704 1394 aaKnown RBP30.81■■■□□ 2.52
PSPC1-204ENST00000492741 DIP2AQ14689 1571 aa30.8■■■□□ 2.52
PSPC1-204ENST00000492741 CENPJQ9HC77 1338 aaPredicted RBP30.8■■■□□ 2.52
PSPC1-204ENST00000492741 POGKQ9P215 609 aa30.78■■■□□ 2.52
PSPC1-204ENST00000492741 ABCC11Q96J66 1382 aa30.77■■■□□ 2.52
PSPC1-204ENST00000492741 TESK2Q96S53 571 aa30.76■■■□□ 2.51
PSPC1-204ENST00000492741 SAFB2Q14151 953 aaKnown RBP eCLIP30.75■■■□□ 2.51
PSPC1-204ENST00000492741 PRAM1Q96QH2 718 aa30.75■■■□□ 2.51
PSPC1-204ENST00000492741 AMOTL2Q9Y2J4 779 aa30.74■■■□□ 2.51
PSPC1-204ENST00000492741 C11orf95C9JLR9 678 aaPredicted RBP30.73■■■□□ 2.51
PSPC1-204ENST00000492741 SLC24A1O60721 1099 aa30.73■■■□□ 2.51
PSPC1-204ENST00000492741 TMF1P82094 1093 aa30.73■■■□□ 2.51
PSPC1-204ENST00000492741 POLR3GLQ9BT43 218 aa30.73■■■□□ 2.51
PSPC1-204ENST00000492741 ARHGEF28Q8N1W1 1705 aaKnown RBP30.71■■■□□ 2.51
PSPC1-204ENST00000492741 PIK3R4Q99570 1358 aa30.71■■■□□ 2.51
PSPC1-204ENST00000492741 PTPRUQ92729 1446 aa30.7■■■□□ 2.5
PSPC1-204ENST00000492741 WAPLQ7Z5K2 1190 aa30.69■■■□□ 2.5
PSPC1-204ENST00000492741 WASHC2AQ641Q2 1341 aa30.68■■■□□ 2.5
PSPC1-204ENST00000492741 DLC1Q96QB1 1528 aa30.68■■■□□ 2.5
PSPC1-204ENST00000492741 KIF7Q2M1P5 1343 aa30.67■■■□□ 2.5
PSPC1-204ENST00000492741 SIRT1Q96EB6 747 aa30.67■■■□□ 2.5
PSPC1-204ENST00000492741 TECPR2O15040 1411 aa30.66■■■□□ 2.5
PSPC1-204ENST00000492741 CCDC7Q96M83 1385 aa30.66■■■□□ 2.5
PSPC1-204ENST00000492741 QRICH2Q9H0J4 1663 aa30.65■■■□□ 2.5
PSPC1-204ENST00000492741 AEBP2Q6ZN18 517 aaPredicted RBP30.64■■■□□ 2.5
PSPC1-204ENST00000492741 SBNO2Q9Y2G9 1366 aa30.64■■■□□ 2.49
PSPC1-204ENST00000492741 FAM135BQ49AJ0 1406 aa30.63■■■□□ 2.49
PSPC1-204ENST00000492741 KNDC1Q76NI1 1749 aa30.63■■■□□ 2.49
PSPC1-204ENST00000492741 KCNA6P17658 529 aa30.63■■■□□ 2.49
PSPC1-204ENST00000492741 CDCA8Q53HL2 280 aa30.63■■■□□ 2.49
PSPC1-204ENST00000492741 ROBO2Q9HCK4 1378 aa30.63■■■□□ 2.49
PSPC1-204ENST00000492741 DISP3Q9P2K9 1392 aa30.63■■■□□ 2.49
PSPC1-204ENST00000492741 MINK1Q8N4C8 1332 aaPredicted RBP30.63■■■□□ 2.49
PSPC1-204ENST00000492741 STRCQ7RTU9 1775 aa30.62■■■□□ 2.49
PSPC1-204ENST00000492741 PLEKHH1Q9ULM0 1364 aa30.62■■■□□ 2.49
PSPC1-204ENST00000492741 DDX10Q13206 875 aaKnown RBP30.62■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms