RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 STAC3Q96MF2 364 aa17.22■□□□□ 0.35
PRAME-213ENST00000492657 RAPGEF3O95398 923 aa17.22■□□□□ 0.35
PRAME-213ENST00000492657 PPRC1Q5VV67 1664 aaKnown RBP17.22■□□□□ 0.35
PRAME-213ENST00000492657 CDCA7LQ96GN5 454 aa17.21■□□□□ 0.35
PRAME-213ENST00000492657 KNSTRNQ9Y448 316 aa17.21■□□□□ 0.35
PRAME-213ENST00000492657 EFCAB6Q5THR3 1501 aa17.21■□□□□ 0.35
PRAME-213ENST00000492657 AMER1Q5JTC6 1135 aaPredicted RBP17.2■□□□□ 0.34
PRAME-213ENST00000492657 POGZQ7Z3K3 1410 aa17.19■□□□□ 0.34
PRAME-213ENST00000492657 SLC24A1O60721 1099 aa17.18■□□□□ 0.34
PRAME-213ENST00000492657 KIF1BO60333 1816 aa17.18■□□□□ 0.34
PRAME-213ENST00000492657 PPP2R1AP30153 589 aa17.17■□□□□ 0.34
PRAME-213ENST00000492657 NBR1Q14596 966 aa17.17■□□□□ 0.34
PRAME-213ENST00000492657 MROH2AA6NES4 1674 aa17.17■□□□□ 0.34
PRAME-213ENST00000492657 CDCA8Q53HL2 280 aa17.17■□□□□ 0.34
PRAME-213ENST00000492657 ADAMTS8Q9UP79 889 aa17.17■□□□□ 0.34
PRAME-213ENST00000492657 FRMPD1Q5SYB0 1578 aa17.16■□□□□ 0.34
PRAME-213ENST00000492657 ABCA6Q8N139 1617 aa17.16■□□□□ 0.34
PRAME-213ENST00000492657 MAP3K4Q9Y6R4 1608 aa17.16■□□□□ 0.34
PRAME-213ENST00000492657 NOS1P29475 1434 aa17.15■□□□□ 0.34
PRAME-213ENST00000492657 NPATQ14207 1427 aa17.15■□□□□ 0.34
PRAME-213ENST00000492657 EIF3AQ14152 1382 aaKnown RBP17.15■□□□□ 0.34
PRAME-213ENST00000492657 MLH3Q9UHC1 1453 aa17.14■□□□□ 0.33
PRAME-213ENST00000492657 NUTM2DQ5VT03 806 aaPredicted RBP17.14■□□□□ 0.33
PRAME-213ENST00000492657 CCDC136Q96JN2 1154 aa17.14■□□□□ 0.33
PRAME-213ENST00000492657 RCAN3Q9UKA8 241 aa17.14■□□□□ 0.33
PRAME-213ENST00000492657 LMTK2Q8IWU2 1503 aa17.13■□□□□ 0.33
PRAME-213ENST00000492657 MYOM2P54296 1465 aa17.13■□□□□ 0.33
PRAME-213ENST00000492657 KIAA1210Q9ULL0 1709 aa17.13■□□□□ 0.33
PRAME-213ENST00000492657 DEKP35659 375 aaKnown RBP17.12■□□□□ 0.33
PRAME-213ENST00000492657 TMEM132EQ6IEE7 984 aa17.12■□□□□ 0.33
PRAME-213ENST00000492657 TRAK1Q9UPV9 953 aa17.12■□□□□ 0.33
PRAME-213ENST00000492657 RRP1P56182 461 aaKnown RBP17.11■□□□□ 0.33
PRAME-213ENST00000492657 BLMP54132 1417 aaPredicted RBP17.11■□□□□ 0.33
PRAME-213ENST00000492657 NEURL4Q96JN8 1562 aa17.11■□□□□ 0.33
PRAME-213ENST00000492657 ERVK-7P63135 1459 aa17.11■□□□□ 0.33
PRAME-213ENST00000492657 SENP3Q9H4L4 574 aaPredicted RBP17.11■□□□□ 0.33
PRAME-213ENST00000492657 HECW2Q9P2P5 1572 aa17.11■□□□□ 0.33
PRAME-213ENST00000492657 MYOM1P52179 1685 aa17.11■□□□□ 0.33
PRAME-213ENST00000492657 IFT172Q9UG01 1749 aa17.11■□□□□ 0.33
PRAME-213ENST00000492657 SYNMO15061 1565 aa17.11■□□□□ 0.33
PRAME-213ENST00000492657 PDE3BQ13370 1112 aa17.11■□□□□ 0.33
PRAME-213ENST00000492657 CARD14Q9BXL6 1004 aa17.11■□□□□ 0.33
PRAME-213ENST00000492657 FANCIQ9NVI1 1328 aa17.1■□□□□ 0.33
PRAME-213ENST00000492657 EXOC6Q8TAG9 804 aa17.1■□□□□ 0.33
PRAME-213ENST00000492657 ASXL1Q8IXJ9 1541 aa17.09■□□□□ 0.33
PRAME-213ENST00000492657 CFAP74Q9C0B2 1584 aa17.09■□□□□ 0.33
PRAME-213ENST00000492657 CYB5RLQ6IPT4 315 aa17.08■□□□□ 0.33
PRAME-213ENST00000492657 ADGRB3O60242 1522 aa17.08■□□□□ 0.33
PRAME-213ENST00000492657 NRXN1Q9ULB1 1477 aa17.08■□□□□ 0.32
PRAME-213ENST00000492657 WDR43Q15061 677 aaKnown RBP eCLIP17.08■□□□□ 0.328e-17■□□□□ 8.1
PRAME-213ENST00000492657 KDM5AP29375 1690 aaKnown RBP17.07■□□□□ 0.32
PRAME-213ENST00000492657 PLIN1O60240 522 aa17.07■□□□□ 0.32
PRAME-213ENST00000492657 ABCC3O15438 1527 aa17.07■□□□□ 0.32
PRAME-213ENST00000492657 C14orf93Q9H972 538 aaKnown RBP17.06■□□□□ 0.32
PRAME-213ENST00000492657 CENPJQ9HC77 1338 aaPredicted RBP17.06■□□□□ 0.32
PRAME-213ENST00000492657 PAK3O75914 559 aaPredicted RBP17.05■□□□□ 0.32
PRAME-213ENST00000492657 CCDC146Q8IYE0 955 aa17.05■□□□□ 0.32
PRAME-213ENST00000492657 PLEKHH1Q9ULM0 1364 aa17.04■□□□□ 0.32
PRAME-213ENST00000492657 NEO1Q92859 1461 aa17.04■□□□□ 0.32
PRAME-213ENST00000492657 INSRP06213 1382 aa17.04■□□□□ 0.32
PRAME-213ENST00000492657 SIGLEC1Q9BZZ2 1709 aa17.04■□□□□ 0.32
PRAME-213ENST00000492657 PIK3C2GO75747 1445 aa17.03■□□□□ 0.32
PRAME-213ENST00000492657 YEATS2Q9ULM3 1422 aa17.03■□□□□ 0.32
PRAME-213ENST00000492657 PRKCSHP14314 528 aaPredicted RBP17.03■□□□□ 0.32
PRAME-213ENST00000492657 SLC12A5Q9H2X9 1139 aa17.03■□□□□ 0.32
PRAME-213ENST00000492657 PPLO60437 1756 aa17.03■□□□□ 0.32
PRAME-213ENST00000492657 ZMYM4Q5VZL5 1548 aa17.02■□□□□ 0.32
PRAME-213ENST00000492657 NPC1L1Q9UHC9 1359 aa17.02■□□□□ 0.31
PRAME-213ENST00000492657 DIP2CQ9Y2E4 1556 aa17.01■□□□□ 0.31
PRAME-213ENST00000492657 IDI1Q13907 227 aa17.01■□□□□ 0.31
PRAME-213ENST00000492657 CAMSAP1Q5T5Y3 1602 aa17■□□□□ 0.31
PRAME-213ENST00000492657 TNNT2P45379 298 aaPredicted RBP16.99■□□□□ 0.31
PRAME-213ENST00000492657 RPGRIP1LQ68CZ1 1315 aa16.99■□□□□ 0.31
PRAME-213ENST00000492657 ADGRB1O14514 1584 aa16.99■□□□□ 0.31
PRAME-213ENST00000492657 SAFB2Q14151 953 aaKnown RBP eCLIP16.98■□□□□ 0.31
PRAME-213ENST00000492657 ANO8Q9HCE9 1232 aaPredicted RBP16.98■□□□□ 0.31
PRAME-213ENST00000492657 SBNO2Q9Y2G9 1366 aa16.98■□□□□ 0.31
PRAME-213ENST00000492657 SETBP1Q9Y6X0 1596 aa16.97■□□□□ 0.31
PRAME-213ENST00000492657 APAF1O14727 1248 aa16.97■□□□□ 0.31
PRAME-213ENST00000492657 RICTORQ6R327 1708 aa16.97■□□□□ 0.31
PRAME-213ENST00000492657 MYO3AQ8NEV4 1616 aa16.97■□□□□ 0.31
PRAME-213ENST00000492657 DUSP27Q5VZP5 1158 aa16.97■□□□□ 0.31
PRAME-213ENST00000492657 ZNF521Q96K83 1311 aa16.96■□□□□ 0.31
PRAME-213ENST00000492657 FAM69CQ0P6D2 419 aa16.96■□□□□ 0.3
PRAME-213ENST00000492657 C20orf194Q5TEA3 1177 aa16.96■□□□□ 0.3
PRAME-213ENST00000492657 CRBNQ96SW2 442 aa16.96■□□□□ 0.3
PRAME-213ENST00000492657 NSD3Q9BZ95 1437 aa16.95■□□□□ 0.3
PRAME-213ENST00000492657 VGFO15240 615 aaPredicted RBP16.95■□□□□ 0.3
PRAME-213ENST00000492657 FBXO31Q5XUX0 539 aaPredicted RBP16.95■□□□□ 0.3
PRAME-213ENST00000492657 STK26Q9P289 416 aa16.95■□□□□ 0.3
PRAME-213ENST00000492657 SPINK5Q9NQ38 1064 aaPredicted RBP16.95■□□□□ 0.3
PRAME-213ENST00000492657 QRICH2Q9H0J4 1663 aa16.95■□□□□ 0.3
PRAME-213ENST00000492657 GOLGA2Q08379 1002 aa16.94■□□□□ 0.3
PRAME-213ENST00000492657 RTN4Q9NQC3 1192 aaKnown RBP16.94■□□□□ 0.3
PRAME-213ENST00000492657 MORC1Q86VD1 984 aa16.93■□□□□ 0.3
PRAME-213ENST00000492657 NEXMIFQ5QGS0 1516 aa16.92■□□□□ 0.3
PRAME-213ENST00000492657 PIK3C2BO00750 1634 aa16.92■□□□□ 0.3
PRAME-213ENST00000492657 CABP2Q9NPB3 220 aa16.92■□□□□ 0.3
PRAME-213ENST00000492657 DMRT2Q9Y5R5 561 aa16.92■□□□□ 0.3
PRAME-213ENST00000492657 ZC3H13Q5T200 1668 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms