RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 RTEL1-TNFRSF6BF6WH68 1400 aa5.99□□□□□ -1.45
TRA2B-215ENST00000492417 MYO5CQ9NQX4 1742 aa5.99□□□□□ -1.45
TRA2B-215ENST00000492417 PANK3Q9H999 370 aa5.99□□□□□ -1.45
TRA2B-215ENST00000492417 ANKRD30BQ9BXX2 1392 aa5.99□□□□□ -1.45
TRA2B-215ENST00000492417 SAMD9LQ8IVG5 1584 aa5.99□□□□□ -1.45
TRA2B-215ENST00000492417 TCOF1Q13428 1488 aaKnown RBP5.98□□□□□ -1.45
TRA2B-215ENST00000492417 NOS1P29475 1434 aa5.98□□□□□ -1.45
TRA2B-215ENST00000492417 CFAP53Q96M91 514 aa5.98□□□□□ -1.45
TRA2B-215ENST00000492417 ARXQ96QS3 562 aa5.98□□□□□ -1.45
TRA2B-215ENST00000492417 MEX3CQ5U5Q3 659 aaKnown RBP5.97□□□□□ -1.45
TRA2B-215ENST00000492417 CDK19Q9BWU1 502 aa5.97□□□□□ -1.45
TRA2B-215ENST00000492417 SLC12A5Q9H2X9 1139 aa5.97□□□□□ -1.45
TRA2B-215ENST00000492417 DMRT2Q9Y5R5 561 aa5.97□□□□□ -1.45
TRA2B-215ENST00000492417 MAPKBP1O60336 1514 aa5.97□□□□□ -1.45
TRA2B-215ENST00000492417 COL17A1Q9UMD9 1497 aaPredicted RBP5.97□□□□□ -1.45
TRA2B-215ENST00000492417 UBAP1LF5GYI3 381 aa5.97□□□□□ -1.45
TRA2B-215ENST00000492417 FOXO3O43524 673 aa5.97□□□□□ -1.45
TRA2B-215ENST00000492417 AMPHP49418 695 aa5.97□□□□□ -1.45
TRA2B-215ENST00000492417 USP35Q9P2H5 1018 aa5.97□□□□□ -1.45
TRA2B-215ENST00000492417 RPGRIP1LQ68CZ1 1315 aa5.97□□□□□ -1.45
TRA2B-215ENST00000492417 GGNBP2Q9H3C7 697 aa5.97□□□□□ -1.45
TRA2B-215ENST00000492417 CABP1Q9NZU7 370 aa5.97□□□□□ -1.45
TRA2B-215ENST00000492417 LTKP29376 864 aa5.97□□□□□ -1.45
TRA2B-215ENST00000492417 LAS1LQ9Y4W2 734 aaKnown RBP5.97□□□□□ -1.45
TRA2B-215ENST00000492417 EIF5BO60841 1220 aaKnown RBP5.96□□□□□ -1.45
TRA2B-215ENST00000492417 NLRP6P59044 892 aa5.96□□□□□ -1.45
TRA2B-215ENST00000492417 FAM135AQ9P2D6 1515 aa5.96□□□□□ -1.46
TRA2B-215ENST00000492417 UHRF1BP1Q6BDS2 1440 aa5.96□□□□□ -1.46
TRA2B-215ENST00000492417 ABCC1P33527 1531 aa5.96□□□□□ -1.46
TRA2B-215ENST00000492417 KCNA6P17658 529 aa5.96□□□□□ -1.46
TRA2B-215ENST00000492417 ABTB2Q8N961 1025 aa5.96□□□□□ -1.46
TRA2B-215ENST00000492417 STAC3Q96MF2 364 aa5.96□□□□□ -1.46
TRA2B-215ENST00000492417 CANXP27824 592 aaKnown RBP5.95□□□□□ -1.46
TRA2B-215ENST00000492417 EVA1CP58658 441 aa5.95□□□□□ -1.46
TRA2B-215ENST00000492417 NUDCQ9Y266 331 aa5.95□□□□□ -1.46
TRA2B-215ENST00000492417 DNMT1P26358 1616 aaKnown RBP5.95□□□□□ -1.46
TRA2B-215ENST00000492417 RIMS2Q9UQ26 1411 aa5.95□□□□□ -1.46
TRA2B-215ENST00000492417 MLH3Q9UHC1 1453 aa5.95□□□□□ -1.46
TRA2B-215ENST00000492417 COG3Q96JB2 828 aa5.95□□□□□ -1.46
TRA2B-215ENST00000492417 U2AF1L5P0DN76 240 aaPredicted RBP5.94□□□□□ -1.46
TRA2B-215ENST00000492417 U2AF1Q01081 240 aaKnown RBP eCLIP5.94□□□□□ -1.46
TRA2B-215ENST00000492417 SHANK2Q9UPX8 1470 aa5.94□□□□□ -1.46
TRA2B-215ENST00000492417 PREX2Q70Z35 1606 aa5.94□□□□□ -1.46
TRA2B-215ENST00000492417 NPATQ14207 1427 aa5.94□□□□□ -1.46
TRA2B-215ENST00000492417 CNTLNQ9NXG0 1405 aa5.94□□□□□ -1.46
TRA2B-215ENST00000492417 DIP2BQ9P265 1576 aa5.94□□□□□ -1.46
TRA2B-215ENST00000492417 NPM2Q86SE8 214 aaKnown RBP5.93□□□□□ -1.46
TRA2B-215ENST00000492417 NUDT16Q96DE0 195 aaKnown RBP5.93□□□□□ -1.46
TRA2B-215ENST00000492417 MAPK8IP3Q9UPT6 1336 aa5.93□□□□□ -1.46
TRA2B-215ENST00000492417 CDC42BPAQ5VT25 1732 aa5.93□□□□□ -1.46
TRA2B-215ENST00000492417 ADAMTS2O95450 1211 aa5.93□□□□□ -1.46
TRA2B-215ENST00000492417 ZC3H6P61129 1189 aaKnown RBP5.93□□□□□ -1.46
TRA2B-215ENST00000492417 C14orf93Q9H972 538 aaKnown RBP5.93□□□□□ -1.46
TRA2B-215ENST00000492417 STRN4Q9NRL3 753 aa5.93□□□□□ -1.46
TRA2B-215ENST00000492417 MAGI2Q86UL8 1455 aa5.92□□□□□ -1.46
TRA2B-215ENST00000492417 ABCA9Q8IUA7 1624 aa5.92□□□□□ -1.46
TRA2B-215ENST00000492417 AMER1Q5JTC6 1135 aaPredicted RBP5.92□□□□□ -1.46
TRA2B-215ENST00000492417 KIF7Q2M1P5 1343 aa5.92□□□□□ -1.46
TRA2B-215ENST00000492417 GPRASP1Q5JY77 1395 aa5.92□□□□□ -1.46
TRA2B-215ENST00000492417 CFAP74Q9C0B2 1584 aa5.92□□□□□ -1.46
TRA2B-215ENST00000492417 HECW2Q9P2P5 1572 aa5.92□□□□□ -1.46
TRA2B-215ENST00000492417 CCDC61Q9Y6R9 512 aa5.92□□□□□ -1.46
TRA2B-215ENST00000492417 KTN1Q86UP2 1357 aaKnown RBP5.92□□□□□ -1.46
TRA2B-215ENST00000492417 CGNL1Q0VF96 1302 aa5.91□□□□□ -1.46
TRA2B-215ENST00000492417 PZPP20742 1482 aa5.91□□□□□ -1.46
TRA2B-215ENST00000492417 ADGRL2O95490 1459 aa5.91□□□□□ -1.46
TRA2B-215ENST00000492417 CCDC146Q8IYE0 955 aa5.91□□□□□ -1.46
TRA2B-215ENST00000492417 CDC42BPBQ9Y5S2 1711 aa5.91□□□□□ -1.46
TRA2B-215ENST00000492417 LMTK3Q96Q04 1460 aa5.91□□□□□ -1.46
TRA2B-215ENST00000492417 KDM4FA0A1W2PPD8 638 aa5.91□□□□□ -1.46
TRA2B-215ENST00000492417 TOM1O60784 492 aa5.91□□□□□ -1.46
TRA2B-215ENST00000492417 DDX17Q92841 729 aaKnown RBP5.91□□□□□ -1.46
TRA2B-215ENST00000492417 NLRP2Q9NX02 1062 aa5.91□□□□□ -1.46
TRA2B-215ENST00000492417 PHF8Q9UPP1 1060 aa5.91□□□□□ -1.46
TRA2B-215ENST00000492417 NCBP3Q53F19 620 aaKnown RBP5.9□□□□□ -1.46
TRA2B-215ENST00000492417 CADPS2Q86UW7 1296 aa5.9□□□□□ -1.46
TRA2B-215ENST00000492417 LRRIQ1Q96JM4 1722 aa5.9□□□□□ -1.46
TRA2B-215ENST00000492417 ZNF335Q9H4Z2 1342 aaPredicted RBP5.9□□□□□ -1.46
TRA2B-215ENST00000492417 WASLO00401 505 aaPredicted RBP5.9□□□□□ -1.46
TRA2B-215ENST00000492417 ZNF330Q9Y3S2 320 aaPredicted RBP5.9□□□□□ -1.46
TRA2B-215ENST00000492417 ARHGEF5Q12774 1597 aa5.9□□□□□ -1.46
TRA2B-215ENST00000492417 UGGT1Q9NYU2 1555 aa5.9□□□□□ -1.47
TRA2B-215ENST00000492417 PRDM11Q9NQV5 511 aa5.9□□□□□ -1.47
TRA2B-215ENST00000492417 TMEM2Q9UHN6 1383 aa5.9□□□□□ -1.47
TRA2B-215ENST00000492417 WASHC2AQ641Q2 1341 aa5.9□□□□□ -1.47
TRA2B-215ENST00000492417 FBLN1P23142 703 aa5.89□□□□□ -1.47
TRA2B-215ENST00000492417 SYTL4Q96C24 671 aaPredicted RBP5.89□□□□□ -1.47
TRA2B-215ENST00000492417 TBX22Q9Y458 520 aa5.89□□□□□ -1.47
TRA2B-215ENST00000492417 RPRD2Q5VT52 1461 aaKnown RBP5.89□□□□□ -1.47
TRA2B-215ENST00000492417 ARAP3Q8WWN8 1544 aa5.89□□□□□ -1.47
TRA2B-215ENST00000492417 C11orf95C9JLR9 678 aaPredicted RBP5.89□□□□□ -1.47
TRA2B-215ENST00000492417 RRS1Q15050 365 aaKnown RBP5.89□□□□□ -1.47
TRA2B-215ENST00000492417 RRP7AQ9Y3A4 280 aaKnown RBP5.89□□□□□ -1.47
TRA2B-215ENST00000492417 MSH6P52701 1360 aa5.89□□□□□ -1.47
TRA2B-215ENST00000492417 CABLES1Q8TDN4 633 aa5.89□□□□□ -1.47
TRA2B-215ENST00000492417 ORAI2Q96SN7 254 aa5.89□□□□□ -1.47
TRA2B-215ENST00000492417 HMOX1P09601 288 aa5.89□□□□□ -1.47
TRA2B-215ENST00000492417 KRT28Q7Z3Y7 464 aa5.89□□□□□ -1.47
TRA2B-215ENST00000492417 C19orf44Q9H6X5 657 aa5.89□□□□□ -1.47
TRA2B-215ENST00000492417 NLRP13Q86W25 1043 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms