RNA–Protein interactions for RNA: ENST00000492390.5

CDK11A-220, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-220ENST00000492390 NCOA3Q9Y6Q9 1424 aa24.71■■□□□ 1.55
CDK11A-220ENST00000492390 SLC52A1Q9NWF4 448 aa24.71■■□□□ 1.55
CDK11A-220ENST00000492390 ADGRB3O60242 1522 aa24.71■■□□□ 1.55
CDK11A-220ENST00000492390 NOS1P29475 1434 aa24.7■■□□□ 1.55
CDK11A-220ENST00000492390 RXRBP28702 533 aa24.7■■□□□ 1.54
CDK11A-220ENST00000492390 ABCC5O15440 1437 aa24.68■■□□□ 1.54
CDK11A-220ENST00000492390 PLEKHG1Q9ULL1 1385 aa24.67■■□□□ 1.54
CDK11A-220ENST00000492390 CDK12Q9NYV4 1490 aaPredicted RBP24.66■■□□□ 1.54
CDK11A-220ENST00000492390 KANK4Q5T7N3 995 aaPredicted RBP24.66■■□□□ 1.54
CDK11A-220ENST00000492390 CHD2O14647 1828 aaKnown RBP24.65■■□□□ 1.54
CDK11A-220ENST00000492390 HDGFP51858 240 aaKnown RBP24.65■■□□□ 1.54
CDK11A-220ENST00000492390 CADPS2Q86UW7 1296 aa24.64■■□□□ 1.54
CDK11A-220ENST00000492390 AHDC1Q5TGY3 1603 aaPredicted RBP24.64■■□□□ 1.53
CDK11A-220ENST00000492390 SHPRHQ149N8 1683 aa24.63■■□□□ 1.53
CDK11A-220ENST00000492390 TBX22Q9Y458 520 aa24.63■■□□□ 1.53
CDK11A-220ENST00000492390 CROCC2H7BZ55 1655 aa24.62■■□□□ 1.53
CDK11A-220ENST00000492390 ZFYVE9O95405 1425 aa24.62■■□□□ 1.53
CDK11A-220ENST00000492390 VPS8Q8N3P4 1428 aa24.62■■□□□ 1.53
CDK11A-220ENST00000492390 C14orf37Q86TY3 774 aa24.62■■□□□ 1.53
CDK11A-220ENST00000492390 C19orf44Q9H6X5 657 aa24.61■■□□□ 1.53
CDK11A-220ENST00000492390 PPP1R15AO75807 674 aaPredicted RBP24.6■■□□□ 1.53
CDK11A-220ENST00000492390 ATF3P18847 181 aa24.59■■□□□ 1.53
CDK11A-220ENST00000492390 DAPK1P53355 1430 aa24.59■■□□□ 1.53
CDK11A-220ENST00000492390 RIMS2Q9UQ26 1411 aa24.58■■□□□ 1.53
CDK11A-220ENST00000492390 ANKRD30AQ9BXX3 1397 aa24.57■■□□□ 1.52
CDK11A-220ENST00000492390 RPRD2Q5VT52 1461 aaKnown RBP24.55■■□□□ 1.52
CDK11A-220ENST00000492390 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.55■■□□□ 1.52
CDK11A-220ENST00000492390 NUTM2BA6NNL0 878 aaPredicted RBP24.54■■□□□ 1.52
CDK11A-220ENST00000492390 NUTM2EB1AL46 878 aaPredicted RBP24.54■■□□□ 1.52
CDK11A-220ENST00000492390 NUTM2AQ8IVF1 878 aaPredicted RBP24.54■■□□□ 1.52
CDK11A-220ENST00000492390 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.54■■□□□ 1.52
CDK11A-220ENST00000492390 AFF2P51816 1311 aa24.54■■□□□ 1.52
CDK11A-220ENST00000492390 PIK3R4Q99570 1358 aa24.54■■□□□ 1.52
CDK11A-220ENST00000492390 PTPN23Q9H3S7 1636 aa24.53■■□□□ 1.52
CDK11A-220ENST00000492390 BRINP3Q76B58 766 aa24.53■■□□□ 1.52
CDK11A-220ENST00000492390 DIP2AQ14689 1571 aa24.52■■□□□ 1.52
CDK11A-220ENST00000492390 CHIC2Q9UKJ5 165 aa24.51■■□□□ 1.51
CDK11A-220ENST00000492390 ADAMTS13Q76LX8 1427 aa24.5■■□□□ 1.51
CDK11A-220ENST00000492390 TMEM131LA2VDJ0 1609 aa24.49■■□□□ 1.51
CDK11A-220ENST00000492390 RBM6P78332 1123 aaKnown RBP24.48■■□□□ 1.51
CDK11A-220ENST00000492390 SETD5Q9C0A6 1442 aa24.48■■□□□ 1.51
CDK11A-220ENST00000492390 MYO5BQ9ULV0 1848 aa24.48■■□□□ 1.51
CDK11A-220ENST00000492390 GCC2Q8IWJ2 1684 aa24.46■■□□□ 1.51
CDK11A-220ENST00000492390 RGS12O14924 1447 aa24.46■■□□□ 1.51
CDK11A-220ENST00000492390 DCCP43146 1447 aa24.45■■□□□ 1.51
CDK11A-220ENST00000492390 QTRT2Q9H974 415 aaKnown RBP24.45■■□□□ 1.5
CDK11A-220ENST00000492390 LRRC59Q96AG4 307 aaKnown RBP24.44■■□□□ 1.5
CDK11A-220ENST00000492390 AMOTL2Q9Y2J4 779 aa24.43■■□□□ 1.5
CDK11A-220ENST00000492390 ASXL1Q8IXJ9 1541 aa24.41■■□□□ 1.5
CDK11A-220ENST00000492390 CHGAP10645 457 aaKnown RBP24.41■■□□□ 1.5
CDK11A-220ENST00000492390 NUTM2DQ5VT03 806 aaPredicted RBP24.41■■□□□ 1.5
CDK11A-220ENST00000492390 C8orf37Q96NL8 207 aa24.41■■□□□ 1.5
CDK11A-220ENST00000492390 SRCAPQ6ZRS2 3230 aa24.41■■□□□ 1.5
CDK11A-220ENST00000492390 TRPM2O94759 1503 aa24.4■■□□□ 1.5
CDK11A-220ENST00000492390 ADGRL2O95490 1459 aa24.39■■□□□ 1.5
CDK11A-220ENST00000492390 FOXD1Q16676 465 aa24.39■■□□□ 1.49
CDK11A-220ENST00000492390 NGLY1Q96IV0 654 aa24.38■■□□□ 1.49
CDK11A-220ENST00000492390 PTPRUQ92729 1446 aa24.37■■□□□ 1.49
CDK11A-220ENST00000492390 ANKRD50Q9ULJ7 1429 aa24.37■■□□□ 1.49
CDK11A-220ENST00000492390 MST1RQ04912 1400 aa24.36■■□□□ 1.49
CDK11A-220ENST00000492390 NHSL1Q5SYE7 1610 aa24.36■■□□□ 1.49
CDK11A-220ENST00000492390 ATAD2Q6PL18 1390 aa24.36■■□□□ 1.49
CDK11A-220ENST00000492390 PNPLA6Q8IY17 1366 aa24.35■■□□□ 1.49
CDK11A-220ENST00000492390 APLP2Q06481 763 aa24.33■■□□□ 1.49
CDK11A-220ENST00000492390 ZRANB1Q9UGI0 708 aa24.33■■□□□ 1.49
CDK11A-220ENST00000492390 UNC13BO14795 1591 aa24.29■■□□□ 1.48
CDK11A-220ENST00000492390 XRN1Q8IZH2 1706 aaKnown RBP24.27■■□□□ 1.48
CDK11A-220ENST00000492390 ADAMTS2O95450 1211 aa24.27■■□□□ 1.48
CDK11A-220ENST00000492390 DDX17Q92841 729 aaKnown RBP24.27■■□□□ 1.48
CDK11A-220ENST00000492390 USP21Q9UK80 565 aa24.25■■□□□ 1.47
CDK11A-220ENST00000492390 TRPC5Q9UL62 973 aaPredicted RBP24.25■■□□□ 1.47
CDK11A-220ENST00000492390 LOC105371045A0A1W2PR82 267 aa24.24■■□□□ 1.47
CDK11A-220ENST00000492390 ADGRL3Q9HAR2 1447 aa24.24■■□□□ 1.47
CDK11A-220ENST00000492390 E9PCH4 1651 aa24.24■■□□□ 1.47
CDK11A-220ENST00000492390 CCDC125Q86Z20 511 aa24.23■■□□□ 1.47
CDK11A-220ENST00000492390 SETBP1Q9Y6X0 1596 aa24.21■■□□□ 1.47
CDK11A-220ENST00000492390 FNBP4Q8N3X1 1017 aaPredicted RBP24.21■■□□□ 1.47
CDK11A-220ENST00000492390 NRXN3Q9Y4C0 1643 aa24.2■■□□□ 1.46
CDK11A-220ENST00000492390 METP08581 1390 aa24.19■■□□□ 1.46
CDK11A-220ENST00000492390 FAM50AQ14320 339 aaKnown RBP24.19■■□□□ 1.46
CDK11A-220ENST00000492390 PTCH1Q13635 1447 aa24.18■■□□□ 1.46
CDK11A-220ENST00000492390 SOS2Q07890 1332 aaPredicted RBP24.17■■□□□ 1.46
CDK11A-220ENST00000492390 C1orf167Q5SNV9 1468 aa24.17■■□□□ 1.46
CDK11A-220ENST00000492390 ATRNO75882 1429 aa24.17■■□□□ 1.46
CDK11A-220ENST00000492390 LAMC1P11047 1609 aa24.16■■□□□ 1.46
CDK11A-220ENST00000492390 IQGAP3Q86VI3 1631 aa24.14■■□□□ 1.46
CDK11A-220ENST00000492390 NALCNQ8IZF0 1738 aa24.12■■□□□ 1.45
CDK11A-220ENST00000492390 ZNF326Q5BKZ1 582 aaKnown RBP24.11■■□□□ 1.45
CDK11A-220ENST00000492390 NUP155O75694 1391 aa24.09■■□□□ 1.45
CDK11A-220ENST00000492390 ORAI2Q96SN7 254 aa24.09■■□□□ 1.45
CDK11A-220ENST00000492390 EP400Q96L91 3159 aa24.07■■□□□ 1.44
CDK11A-220ENST00000492390 ROCK1Q13464 1354 aa24.06■■□□□ 1.44
CDK11A-220ENST00000492390 COL22A1Q8NFW1 1626 aaPredicted RBP24.06■■□□□ 1.44
CDK11A-220ENST00000492390 GJD4Q96KN9 370 aaPredicted RBP24.05■■□□□ 1.44
CDK11A-220ENST00000492390 BCL9LQ86UU0 1499 aa24.05■■□□□ 1.44
CDK11A-220ENST00000492390 MYOM2P54296 1465 aa24.03■■□□□ 1.44
CDK11A-220ENST00000492390 BLMP54132 1417 aaPredicted RBP24.01■■□□□ 1.43
CDK11A-220ENST00000492390 NPHP3Q7Z494 1330 aa23.99■■□□□ 1.43
CDK11A-220ENST00000492390 NEXMIFQ5QGS0 1516 aa23.99■■□□□ 1.43
CDK11A-220ENST00000492390 SPHKAPQ2M3C7 1700 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms