RNA–Protein interactions for RNA: ENST00000492142.5

TRO-223, Transcript of trophinin, human

TSL 3

Gene TRO, Length 485 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRO-223	ENST00000492142	SPATA31E1	Q6ZUB1	1445 aa		14.04	□□□□□ -0.16
TRO-223	ENST00000492142	DCAF11	Q8TEB1	546 aa		14.03	□□□□□ -0.16
TRO-223	ENST00000492142	NLRP1	Q9C000	1473 aa		14.02	□□□□□ -0.16
TRO-223	ENST00000492142	NUTM2D	Q5VT03	806 aa	Predicted RBP	14	□□□□□ -0.17
TRO-223	ENST00000492142	TMEM131L	A2VDJ0	1609 aa		14	□□□□□ -0.17
TRO-223	ENST00000492142	MYO5B	Q9ULV0	1848 aa		13.99	□□□□□ -0.17
TRO-223	ENST00000492142	PPP1R15A	O75807	674 aa	Predicted RBP	13.99	□□□□□ -0.17
TRO-223	ENST00000492142	ADGRB3	O60242	1522 aa		13.99	□□□□□ -0.17
TRO-223	ENST00000492142	A2ML1	A8K2U0	1454 aa		13.99	□□□□□ -0.17
TRO-223	ENST00000492142	MYO3A	Q8NEV4	1616 aa		13.98	□□□□□ -0.17
TRO-223	ENST00000492142	RPGRIP1L	Q68CZ1	1315 aa		13.98	□□□□□ -0.17
TRO-223	ENST00000492142	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.98	□□□□□ -0.17
TRO-223	ENST00000492142	UHRF1BP1	Q6BDS2	1440 aa		13.97	□□□□□ -0.17
TRO-223	ENST00000492142	NEURL4	Q96JN8	1562 aa		13.96	□□□□□ -0.18
TRO-223	ENST00000492142	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	13.96	□□□□□ -0.18
TRO-223	ENST00000492142	UBR1	Q8IWV7	1749 aa		13.95	□□□□□ -0.18
TRO-223	ENST00000492142	NBPF8	Q3BBV2	869 aa		13.95	□□□□□ -0.18
TRO-223	ENST00000492142	RIMS2	Q9UQ26	1411 aa		13.95	□□□□□ -0.18
TRO-223	ENST00000492142	ADGRF5	Q8IZF2	1346 aa		13.94	□□□□□ -0.18
TRO-223	ENST00000492142	VGF	O15240	615 aa	Predicted RBP	13.94	□□□□□ -0.18
TRO-223	ENST00000492142	HDGF	P51858	240 aa	Known RBP	13.94	□□□□□ -0.18
TRO-223	ENST00000492142	RNF39	Q9H2S5	420 aa		13.94	□□□□□ -0.18
TRO-223	ENST00000492142	TMEM2	Q9UHN6	1383 aa		13.94	□□□□□ -0.18
TRO-223	ENST00000492142	TXNDC2	Q86VQ3	553 aa		13.93	□□□□□ -0.18
TRO-223	ENST00000492142	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
TRO-223	ENST00000492142	STAC3	Q96MF2	364 aa		13.93	□□□□□ -0.18
TRO-223	ENST00000492142	EID1	Q9Y6B2	187 aa		13.93	□□□□□ -0.18
TRO-223	ENST00000492142	KDM5A	P29375	1690 aa	Known RBP	13.92	□□□□□ -0.18
TRO-223	ENST00000492142	NEXMIF	Q5QGS0	1516 aa		13.92	□□□□□ -0.18
TRO-223	ENST00000492142	LTK	P29376	864 aa		13.92	□□□□□ -0.18
TRO-223	ENST00000492142	BCAN	Q96GW7	911 aa		13.92	□□□□□ -0.18
TRO-223	ENST00000492142	PPL	O60437	1756 aa		13.91	□□□□□ -0.18
TRO-223	ENST00000492142	HSPA2	P54652	639 aa		13.91	□□□□□ -0.18
TRO-223	ENST00000492142	CACNB1	Q02641	598 aa	Predicted RBP	13.91	□□□□□ -0.18
TRO-223	ENST00000492142	ZNF142	P52746	1687 aa	Predicted RBP	13.91	□□□□□ -0.18
TRO-223	ENST00000492142	ZFYVE9	O95405	1425 aa		13.9	□□□□□ -0.18
TRO-223	ENST00000492142	ANKLE2	Q86XL3	938 aa		13.9	□□□□□ -0.18
TRO-223	ENST00000492142	IFT172	Q9UG01	1749 aa		13.9	□□□□□ -0.18
TRO-223	ENST00000492142	PRAG1	Q86YV5	1406 aa		13.9	□□□□□ -0.19
TRO-223	ENST00000492142	MYOM2	P54296	1465 aa		13.88	□□□□□ -0.19
TRO-223	ENST00000492142	ARHGAP23	Q9P227	1491 aa		13.88	□□□□□ -0.19
TRO-223	ENST00000492142	CFAP70	Q5T0N1	1121 aa		13.88	□□□□□ -0.19
TRO-223	ENST00000492142	SLIT1	O75093	1534 aa		13.88	□□□□□ -0.19
TRO-223	ENST00000492142	NCKAP5L	Q9HCH0	1330 aa		13.88	□□□□□ -0.19
TRO-223	ENST00000492142	NBPF1	Q3BBV0	1214 aa		13.87	□□□□□ -0.19
TRO-223	ENST00000492142	LMTK3	Q96Q04	1460 aa		13.86	□□□□□ -0.19
TRO-223	ENST00000492142	NRXN1	Q9ULB1	1477 aa		13.86	□□□□□ -0.19
TRO-223	ENST00000492142	C14orf93	Q9H972	538 aa	Known RBP	13.85	□□□□□ -0.19
TRO-223	ENST00000492142	SCAF11	Q99590	1463 aa	Known RBP	13.85	□□□□□ -0.19
TRO-223	ENST00000492142	PIK3C2G	O75747	1445 aa		13.84	□□□□□ -0.19
TRO-223	ENST00000492142	PLEKHG1	Q9ULL1	1385 aa		13.83	□□□□□ -0.19
TRO-223	ENST00000492142	TMEM132E	Q6IEE7	984 aa		13.83	□□□□□ -0.2
TRO-223	ENST00000492142	SLC26A8	Q96RN1	970 aa		13.83	□□□□□ -0.2
TRO-223	ENST00000492142	ROCK2	O75116	1388 aa	Known RBP	13.83	□□□□□ -0.2
TRO-223	ENST00000492142	CARD11	Q9BXL7	1154 aa		13.82	□□□□□ -0.2
TRO-223	ENST00000492142	RALGAPB	Q86X10	1494 aa		13.8	□□□□□ -0.2
TRO-223	ENST00000492142	TRPM1	Q7Z4N2	1603 aa		13.8	□□□□□ -0.2
TRO-223	ENST00000492142	NPHP4	O75161	1426 aa	Predicted RBP	13.8	□□□□□ -0.2
TRO-223	ENST00000492142	ALK	Q9UM73	1620 aa		13.79	□□□□□ -0.2
TRO-223	ENST00000492142	C1QBP	Q07021	282 aa	Known RBP	13.79	□□□□□ -0.2
TRO-223	ENST00000492142	STK26	Q9P289	416 aa		13.79	□□□□□ -0.2
TRO-223	ENST00000492142	TBX22	Q9Y458	520 aa		13.79	□□□□□ -0.2
TRO-223	ENST00000492142	ADAMTS13	Q76LX8	1427 aa		13.79	□□□□□ -0.2
TRO-223	ENST00000492142	IQGAP1	P46940	1657 aa		13.79	□□□□□ -0.2
TRO-223	ENST00000492142	SETBP1	Q9Y6X0	1596 aa		13.78	□□□□□ -0.2
TRO-223	ENST00000492142	NRXN3	Q9Y4C0	1643 aa		13.78	□□□□□ -0.2
TRO-223	ENST00000492142	POLR1A	O95602	1720 aa	Predicted RBP	13.78	□□□□□ -0.2
TRO-223	ENST00000492142	KIAA1210	Q9ULL0	1709 aa		13.78	□□□□□ -0.2
TRO-223	ENST00000492142	MET	P08581	1390 aa		13.77	□□□□□ -0.21
TRO-223	ENST00000492142	MED14	O60244	1454 aa		13.76	□□□□□ -0.21
TRO-223	ENST00000492142	GPRASP1	Q5JY77	1395 aa		13.76	□□□□□ -0.21
TRO-223	ENST00000492142	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.76	□□□□□ -0.21
TRO-223	ENST00000492142	TRAK1	Q9UPV9	953 aa		13.76	□□□□□ -0.21
TRO-223	ENST00000492142	HSPA5	P11021	654 aa	Known RBP	13.75	□□□□□ -0.21
TRO-223	ENST00000492142	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
TRO-223	ENST00000492142	LAMC1	P11047	1609 aa		13.75	□□□□□ -0.21
TRO-223	ENST00000492142	STRC	Q7RTU9	1775 aa		13.74	□□□□□ -0.21
TRO-223	ENST00000492142	ADGRB1	O14514	1584 aa		13.74	□□□□□ -0.21
TRO-223	ENST00000492142	ASXL1	Q8IXJ9	1541 aa		13.74	□□□□□ -0.21
TRO-223	ENST00000492142	USP47	Q96K76	1375 aa		13.73	□□□□□ -0.21
TRO-223	ENST00000492142	AMOTL2	Q9Y2J4	779 aa		13.73	□□□□□ -0.21
TRO-223	ENST00000492142	SETD1A	O15047	1707 aa	Known RBP	13.73	□□□□□ -0.21
TRO-223	ENST00000492142	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.73	□□□□□ -0.21
TRO-223	ENST00000492142	LRPPRC	P42704	1394 aa	Known RBP	13.71	□□□□□ -0.21
TRO-223	ENST00000492142	ST20-MTHFS	A0A0A6YYL1	179 aa		13.71	□□□□□ -0.21
TRO-223	ENST00000492142	PTPRU	Q92729	1446 aa		13.71	□□□□□ -0.22
TRO-223	ENST00000492142	DIP2A	Q14689	1571 aa		13.71	□□□□□ -0.22
TRO-223	ENST00000492142	POGK	Q9P215	609 aa		13.7	□□□□□ -0.22
TRO-223	ENST00000492142	ABCC11	Q96J66	1382 aa		13.7	□□□□□ -0.22
TRO-223	ENST00000492142	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
TRO-223	ENST00000492142	WAPL	Q7Z5K2	1190 aa		13.69	□□□□□ -0.22
TRO-223	ENST00000492142	PRAM1	Q96QH2	718 aa		13.69	□□□□□ -0.22
TRO-223	ENST00000492142	PIK3R4	Q99570	1358 aa		13.69	□□□□□ -0.22
TRO-223	ENST00000492142	KCNA6	P17658	529 aa		13.68	□□□□□ -0.22
TRO-223	ENST00000492142	EIF3A	Q14152	1382 aa	Known RBP	13.68	□□□□□ -0.22
TRO-223	ENST00000492142	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.67	□□□□□ -0.22
TRO-223	ENST00000492142	ZNF316	A6NFI3	1004 aa	Predicted RBP	13.66	□□□□□ -0.22
TRO-223	ENST00000492142	SIRT1	Q96EB6	747 aa		13.66	□□□□□ -0.22
TRO-223	ENST00000492142	ROBO2	Q9HCK4	1378 aa		13.66	□□□□□ -0.22
TRO-223	ENST00000492142	CHD2	O14647	1828 aa	Known RBP	13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms