RNA–Protein interactions for RNA: ENST00000491734.6

EXD3-212, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 1 (best)

Gene EXD3, Length 2,176 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-212ENST00000491734 MADDQ8WXG6 1647 aa24.51■■□□□ 1.51
EXD3-212ENST00000491734 STAC3Q96MF2 364 aa24.5■■□□□ 1.51
EXD3-212ENST00000491734 TESK2Q96S53 571 aa24.5■■□□□ 1.51
EXD3-212ENST00000491734 WASHC2CQ9Y4E1 1318 aa24.49■■□□□ 1.51
EXD3-212ENST00000491734 FAM9BQ8IZU0 186 aa24.49■■□□□ 1.51
EXD3-212ENST00000491734 CFAP65Q6ZU64 1925 aaKnown RBP24.47■■□□□ 1.51
EXD3-212ENST00000491734 SIGLEC1Q9BZZ2 1709 aa24.46■■□□□ 1.51
EXD3-212ENST00000491734 COL17A1Q9UMD9 1497 aaPredicted RBP24.46■■□□□ 1.51
EXD3-212ENST00000491734 MROH2AA6NES4 1674 aa24.46■■□□□ 1.51
EXD3-212ENST00000491734 DISP3Q9P2K9 1392 aa24.46■■□□□ 1.51
EXD3-212ENST00000491734 IFT172Q9UG01 1749 aa24.45■■□□□ 1.51
EXD3-212ENST00000491734 ZBED9Q6R2W3 1325 aa24.45■■□□□ 1.51
EXD3-212ENST00000491734 ARHGAP31Q2M1Z3 1444 aa24.45■■□□□ 1.5
EXD3-212ENST00000491734 AGLP35573 1532 aa24.44■■□□□ 1.5
EXD3-212ENST00000491734 NOS1P29475 1434 aa24.43■■□□□ 1.5
EXD3-212ENST00000491734 ADGRB3O60242 1522 aa24.43■■□□□ 1.5
EXD3-212ENST00000491734 IRX6P78412 446 aaPredicted RBP24.42■■□□□ 1.5
EXD3-212ENST00000491734 ERICH6Q7L0X2 663 aa24.42■■□□□ 1.5
EXD3-212ENST00000491734 PIK3C2BO00750 1634 aa24.4■■□□□ 1.5
EXD3-212ENST00000491734 MYOM2P54296 1465 aa24.4■■□□□ 1.5
EXD3-212ENST00000491734 KIAA1210Q9ULL0 1709 aa24.4■■□□□ 1.5
EXD3-212ENST00000491734 ARHGEF40Q8TER5 1519 aa24.4■■□□□ 1.5
EXD3-212ENST00000491734 SYNMO15061 1565 aa24.39■■□□□ 1.49
EXD3-212ENST00000491734 ADGRF5Q8IZF2 1346 aa24.39■■□□□ 1.49
EXD3-212ENST00000491734 CHGAP10645 457 aaKnown RBP24.37■■□□□ 1.49
EXD3-212ENST00000491734 TRHP20396 242 aaPredicted RBP24.37■■□□□ 1.49
EXD3-212ENST00000491734 TMF1P82094 1093 aa24.37■■□□□ 1.49
EXD3-212ENST00000491734 CFAP70Q5T0N1 1121 aa24.36■■□□□ 1.49
EXD3-212ENST00000491734 IQGAP1P46940 1657 aa24.35■■□□□ 1.49
EXD3-212ENST00000491734 SCAF11Q99590 1463 aaKnown RBP24.34■■□□□ 1.49
EXD3-212ENST00000491734 PREX1Q8TCU6 1659 aa24.34■■□□□ 1.49
EXD3-212ENST00000491734 PPLO60437 1756 aa24.33■■□□□ 1.49
EXD3-212ENST00000491734 NRXN1Q9ULB1 1477 aa24.33■■□□□ 1.49
EXD3-212ENST00000491734 PER1O15534 1290 aaPredicted RBP24.32■■□□□ 1.48
EXD3-212ENST00000491734 PPP6R1Q9UPN7 881 aa24.32■■□□□ 1.48
EXD3-212ENST00000491734 PANK3Q9H999 370 aa24.3■■□□□ 1.48
EXD3-212ENST00000491734 RALBP1Q15311 655 aa24.29■■□□□ 1.48
EXD3-212ENST00000491734 MYBBP1AQ9BQG0 1328 aaKnown RBP24.27■■□□□ 1.48
EXD3-212ENST00000491734 TMC1Q8TDI8 760 aa24.27■■□□□ 1.48
EXD3-212ENST00000491734 SMG6Q86US8 1419 aaKnown RBP24.27■■□□□ 1.48
EXD3-212ENST00000491734 CLTCQ00610 1675 aaKnown RBP24.26■■□□□ 1.47
EXD3-212ENST00000491734 PNISRQ8TF01 805 aaKnown RBP24.25■■□□□ 1.47
EXD3-212ENST00000491734 RPGRIP1LQ68CZ1 1315 aa24.25■■□□□ 1.47
EXD3-212ENST00000491734 KTN1Q86UP2 1357 aaKnown RBP24.24■■□□□ 1.47
EXD3-212ENST00000491734 SLC52A1Q9NWF4 448 aa24.23■■□□□ 1.47
EXD3-212ENST00000491734 B4GALNT3Q6L9W6 998 aa24.23■■□□□ 1.47
EXD3-212ENST00000491734 PARD3Q8TEW0 1356 aa24.23■■□□□ 1.47
EXD3-212ENST00000491734 CC2D1BQ5T0F9 858 aaKnown RBP24.22■■□□□ 1.47
EXD3-212ENST00000491734 RNF123Q5XPI4 1314 aa24.22■■□□□ 1.47
EXD3-212ENST00000491734 ERVK-7P63135 1459 aa24.22■■□□□ 1.47
EXD3-212ENST00000491734 EIF3AQ14152 1382 aaKnown RBP24.22■■□□□ 1.47
EXD3-212ENST00000491734 PIK3C2GO75747 1445 aa24.21■■□□□ 1.47
EXD3-212ENST00000491734 NEXMIFQ5QGS0 1516 aa24.21■■□□□ 1.47
EXD3-212ENST00000491734 BRD4O60885 1362 aaPredicted RBP24.21■■□□□ 1.47
EXD3-212ENST00000491734 IDI1Q13907 227 aa24.2■■□□□ 1.47
EXD3-212ENST00000491734 SETBP1Q9Y6X0 1596 aa24.2■■□□□ 1.46
EXD3-212ENST00000491734 TMEM131LA2VDJ0 1609 aa24.2■■□□□ 1.46
EXD3-212ENST00000491734 MYO5BQ9ULV0 1848 aa24.2■■□□□ 1.46
EXD3-212ENST00000491734 SENP3-EIF4A1A0A087X0R7 540 aa24.19■■□□□ 1.46
EXD3-212ENST00000491734 NUTM2DQ5VT03 806 aaPredicted RBP24.18■■□□□ 1.46
EXD3-212ENST00000491734 SPATA31D1Q6ZQQ2 1576 aa24.17■■□□□ 1.46
EXD3-212ENST00000491734 CDCA8Q53HL2 280 aa24.16■■□□□ 1.46
EXD3-212ENST00000491734 FBXO31Q5XUX0 539 aaPredicted RBP24.15■■□□□ 1.46
EXD3-212ENST00000491734 NLRP13Q86W25 1043 aa24.15■■□□□ 1.46
EXD3-212ENST00000491734 C14orf93Q9H972 538 aaKnown RBP24.15■■□□□ 1.46
EXD3-212ENST00000491734 NOP58Q9Y2X3 529 aaKnown RBP24.15■■□□□ 1.46
EXD3-212ENST00000491734 LRPPRCP42704 1394 aaKnown RBP24.13■■□□□ 1.45
EXD3-212ENST00000491734 TMEM132EQ6IEE7 984 aa24.13■■□□□ 1.45
EXD3-212ENST00000491734 ZFYVE9O95405 1425 aa24.13■■□□□ 1.45
EXD3-212ENST00000491734 MYO3AQ8NEV4 1616 aa24.12■■□□□ 1.45
EXD3-212ENST00000491734 ADGRB1O14514 1584 aa24.12■■□□□ 1.45
EXD3-212ENST00000491734 TRAK1Q9UPV9 953 aa24.12■■□□□ 1.45
EXD3-212ENST00000491734 NUDCQ9Y266 331 aa24.12■■□□□ 1.45
EXD3-212ENST00000491734 MLECQ14165 292 aa24.11■■□□□ 1.45
EXD3-212ENST00000491734 VGFO15240 615 aaPredicted RBP24.1■■□□□ 1.45
EXD3-212ENST00000491734 DEKP35659 375 aaKnown RBP24.09■■□□□ 1.45
EXD3-212ENST00000491734 KNSTRNQ9Y448 316 aa24.09■■□□□ 1.45
EXD3-212ENST00000491734 CENPJQ9HC77 1338 aaPredicted RBP24.07■■□□□ 1.44
EXD3-212ENST00000491734 AMER1Q5JTC6 1135 aaPredicted RBP24.06■■□□□ 1.44
EXD3-212ENST00000491734 SENP3Q9H4L4 574 aaPredicted RBP24.06■■□□□ 1.44
EXD3-212ENST00000491734 ZMYM3Q14202 1370 aa24.05■■□□□ 1.44
EXD3-212ENST00000491734 MYOM1P52179 1685 aa24.05■■□□□ 1.44
EXD3-212ENST00000491734 SBNO2Q9Y2G9 1366 aa24.03■■□□□ 1.44
EXD3-212ENST00000491734 KDM5AP29375 1690 aaKnown RBP24.03■■□□□ 1.44
EXD3-212ENST00000491734 SLC24A1O60721 1099 aa24.03■■□□□ 1.44
EXD3-212ENST00000491734 ESF1Q9H501 851 aaKnown RBP24.01■■□□□ 1.43
EXD3-212ENST00000491734 A2ML1A8K2U0 1454 aa24■■□□□ 1.43
EXD3-212ENST00000491734 CCDC136Q96JN2 1154 aa23.99■■□□□ 1.43
EXD3-212ENST00000491734 IPO9Q96P70 1041 aaKnown RBP23.99■■□□□ 1.43
EXD3-212ENST00000491734 PPP2R1AP30153 589 aa23.98■■□□□ 1.43
EXD3-212ENST00000491734 ASXL1Q8IXJ9 1541 aa23.98■■□□□ 1.43
EXD3-212ENST00000491734 QRICH2Q9H0J4 1663 aa23.98■■□□□ 1.43
EXD3-212ENST00000491734 CARD14Q9BXL6 1004 aa23.98■■□□□ 1.43
EXD3-212ENST00000491734 ARHGEF28Q8N1W1 1705 aaKnown RBP23.97■■□□□ 1.43
EXD3-212ENST00000491734 PAK3O75914 559 aaPredicted RBP23.97■■□□□ 1.43
EXD3-212ENST00000491734 ANP32AP39687 249 aaKnown RBP23.96■■□□□ 1.43
EXD3-212ENST00000491734 SALL2Q9Y467 1007 aaPredicted RBP23.95■■□□□ 1.42
EXD3-212ENST00000491734 STAG3Q9UJ98 1225 aa23.94■■□□□ 1.42
EXD3-212ENST00000491734 STK26Q9P289 416 aa23.92■■□□□ 1.42
EXD3-212ENST00000491734 NPC1L1Q9UHC9 1359 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms