RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 TSKSQ9UJT2 592 aa8.82□□□□□ -1
RTN4-215ENST00000491592 ADGRG1Q9Y653 693 aa8.82□□□□□ -1
RTN4-215ENST00000491592 NBPF26B4DH59 902 aa8.8□□□□□ -1
RTN4-215ENST00000491592 METTL3Q86U44 580 aaKnown RBP8.8□□□□□ -1
RTN4-215ENST00000491592 HPS5Q9UPZ3 1129 aa8.8□□□□□ -1
RTN4-215ENST00000491592 PXYLP1Q8TE99 480 aa8.79□□□□□ -1
RTN4-215ENST00000491592 GPBP1L1Q9HC44 474 aaPredicted RBP8.79□□□□□ -1
RTN4-215ENST00000491592 OATP04181 439 aa8.78□□□□□ -1
RTN4-215ENST00000491592 TTLL12Q14166 644 aaPredicted RBP8.78□□□□□ -1
RTN4-215ENST00000491592 PARP9Q8IXQ6 854 aa8.78□□□□□ -1
RTN4-215ENST00000491592 RBM46Q8TBY0 533 aaKnown RBP8.78□□□□□ -1
RTN4-215ENST00000491592 PHOX2BQ99453 314 aa8.78□□□□□ -1
RTN4-215ENST00000491592 C3orf80F5H4A9 247 aa8.76□□□□□ -1.01
RTN4-215ENST00000491592 PPP4CP60510 307 aa8.76□□□□□ -1.01
RTN4-215ENST00000491592 NUDT18Q6ZVK8 323 aa8.76□□□□□ -1.01
RTN4-215ENST00000491592 PNMA3Q9UL41 463 aa8.76□□□□□ -1.01
RTN4-215ENST00000491592 KDM4CQ9H3R0 1056 aa8.75□□□□□ -1.01
RTN4-215ENST00000491592 MDM2Q00987 491 aaPredicted RBP8.74□□□□□ -1.01
RTN4-215ENST00000491592 GIGYF2Q6Y7W6 1299 aaKnown RBP8.74□□□□□ -1.01
RTN4-215ENST00000491592 NLRP7Q8WX94 980 aa8.74□□□□□ -1.01
RTN4-215ENST00000491592 TATDN2Q93075 761 aa8.74□□□□□ -1.01
RTN4-215ENST00000491592 EYA1Q99502 592 aa8.74□□□□□ -1.01
RTN4-215ENST00000491592 CLCN1P35523 988 aa8.73□□□□□ -1.01
RTN4-215ENST00000491592 GPCPD1Q9NPB8 672 aa8.73□□□□□ -1.01
RTN4-215ENST00000491592 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.72□□□□□ -1.01
RTN4-215ENST00000491592 SMAPO00193 183 aa8.72□□□□□ -1.01
RTN4-215ENST00000491592 RCCD1A6NED2 376 aa8.71□□□□□ -1.02
RTN4-215ENST00000491592 DNAJB2P25686 324 aa8.71□□□□□ -1.02
RTN4-215ENST00000491592 HDGFP51858 240 aaKnown RBP8.71□□□□□ -1.02
RTN4-215ENST00000491592 TMUB1Q9BVT8 246 aa8.71□□□□□ -1.02
RTN4-215ENST00000491592 REPIN1Q9BWE0 567 aaKnown RBP8.71□□□□□ -1.02
RTN4-215ENST00000491592 LAPTM4AQ15012 233 aa8.7□□□□□ -1.02
RTN4-215ENST00000491592 Q6ZNB5 142 aa8.7□□□□□ -1.02
RTN4-215ENST00000491592 SAMD7Q7Z3H4 446 aa8.7□□□□□ -1.02
RTN4-215ENST00000491592 MS4A1P11836 297 aa8.68□□□□□ -1.02
RTN4-215ENST00000491592 TMEM134Q9H6X4 195 aa8.68□□□□□ -1.02
RTN4-215ENST00000491592 TJAP1Q5JTD0 557 aa8.67□□□□□ -1.02
RTN4-215ENST00000491592 NECTIN2Q92692 538 aa8.67□□□□□ -1.02
RTN4-215ENST00000491592 FAM217BQ9NTX9 383 aaPredicted RBP8.67□□□□□ -1.02
RTN4-215ENST00000491592 TMEM132AQ24JP5 1023 aa8.66□□□□□ -1.02
RTN4-215ENST00000491592 DDRGK1Q96HY6 314 aa8.66□□□□□ -1.02
RTN4-215ENST00000491592 IL21Q9HBE4 155 aa8.66□□□□□ -1.02
RTN4-215ENST00000491592 FAM117AQ9C073 453 aa8.65□□□□□ -1.02
RTN4-215ENST00000491592 SSTR3P32745 418 aaPredicted RBP8.63□□□□□ -1.03
RTN4-215ENST00000491592 MTRQ99707 1265 aa8.63□□□□□ -1.03
RTN4-215ENST00000491592 PLEKHG3A1L390 1219 aa8.62□□□□□ -1.03
RTN4-215ENST00000491592 SWT1Q5T5J6 900 aaKnown RBP8.62□□□□□ -1.03
RTN4-215ENST00000491592 SULF1Q8IWU6 871 aa8.62□□□□□ -1.03
RTN4-215ENST00000491592 IL27Q8NEV9 243 aa8.62□□□□□ -1.03
RTN4-215ENST00000491592 DDX11L8A8MPP1 907 aa8.61□□□□□ -1.03
RTN4-215ENST00000491592 GFRA3O60609 400 aa8.61□□□□□ -1.03
RTN4-215ENST00000491592 RNF40O75150 1001 aa8.61□□□□□ -1.03
RTN4-215ENST00000491592 SLC4A3P48751 1232 aa8.61□□□□□ -1.03
RTN4-215ENST00000491592 CD46P15529 392 aa8.6□□□□□ -1.03
RTN4-215ENST00000491592 PPP1R18Q6NYC8 613 aa8.6□□□□□ -1.03
RTN4-215ENST00000491592 SLF2Q8IX21 1173 aa8.6□□□□□ -1.03
RTN4-215ENST00000491592 PRKD2Q9BZL6 878 aa8.6□□□□□ -1.03
RTN4-215ENST00000491592 V9GY48 417 aaPredicted RBP8.6□□□□□ -1.03
RTN4-215ENST00000491592 BEGAINQ9BUH8 593 aa8.59□□□□□ -1.03
RTN4-215ENST00000491592 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.59□□□□□ -1.03
RTN4-215ENST00000491592 RDH13Q8NBN7 331 aa8.58□□□□□ -1.04
RTN4-215ENST00000491592 GGCXP38435 758 aa8.57□□□□□ -1.04
RTN4-215ENST00000491592 APLP1P51693 650 aa8.57□□□□□ -1.04
RTN4-215ENST00000491592 TRAF7Q6Q0C0 670 aa8.57□□□□□ -1.04
RTN4-215ENST00000491592 NRG2O14511 850 aaPredicted RBP8.56□□□□□ -1.04
RTN4-215ENST00000491592 ZNF516Q92618 1163 aa8.56□□□□□ -1.04
RTN4-215ENST00000491592 SLC10A3P09131 477 aa8.55□□□□□ -1.04
RTN4-215ENST00000491592 PRR14Q9BWN1 585 aa8.55□□□□□ -1.04
RTN4-215ENST00000491592 SH3D19Q5HYK7 790 aa8.54□□□□□ -1.04
RTN4-215ENST00000491592 RSPH4AQ5TD94 716 aa8.54□□□□□ -1.04
RTN4-215ENST00000491592 ARXQ96QS3 562 aa8.54□□□□□ -1.04
RTN4-215ENST00000491592 CFHP08603 1231 aa8.53□□□□□ -1.04
RTN4-215ENST00000491592 TBC1D2Q9BYX2 928 aa8.52□□□□□ -1.05
RTN4-215ENST00000491592 GCGRP47871 477 aa8.51□□□□□ -1.05
RTN4-215ENST00000491592 COPS2P61201 443 aa8.51□□□□□ -1.05
RTN4-215ENST00000491592 MYSM1Q5VVJ2 828 aa8.51□□□□□ -1.05
RTN4-215ENST00000491592 NUTM1Q86Y26 1132 aa8.51□□□□□ -1.05
RTN4-215ENST00000491592 SPIRE2Q8WWL2 714 aa8.51□□□□□ -1.05
RTN4-215ENST00000491592 RSPH6AQ9H0K4 717 aa8.51□□□□□ -1.05
RTN4-215ENST00000491592 GOPCQ9HD26 462 aa8.51□□□□□ -1.05
RTN4-215ENST00000491592 DIXDC1Q155Q3 683 aa8.5□□□□□ -1.05
RTN4-215ENST00000491592 NKX2-3Q8TAU0 364 aa8.5□□□□□ -1.05
RTN4-215ENST00000491592 KDM4AO75164 1064 aa8.49□□□□□ -1.05
RTN4-215ENST00000491592 ZPR1O75312 459 aa8.49□□□□□ -1.05
RTN4-215ENST00000491592 CLK2P49760 499 aaKnown RBP8.48□□□□□ -1.05
RTN4-215ENST00000491592 USP46P62068 366 aa8.48□□□□□ -1.05
RTN4-215ENST00000491592 PDZRN3Q9UPQ7 1066 aa8.48□□□□□ -1.05
RTN4-215ENST00000491592 PCDHB3Q9Y5E6 796 aa8.48□□□□□ -1.05
RTN4-215ENST00000491592 LCE2BO14633 110 aa8.47□□□□□ -1.05
RTN4-215ENST00000491592 HOXA2O43364 376 aa8.47□□□□□ -1.05
RTN4-215ENST00000491592 SKIV2LQ15477 1246 aaKnown RBP8.47□□□□□ -1.05
RTN4-215ENST00000491592 KMT5BQ4FZB7 885 aa8.47□□□□□ -1.05
RTN4-215ENST00000491592 PCMTD1Q96MG8 357 aaPredicted RBP8.47□□□□□ -1.05
RTN4-215ENST00000491592 MOXD2PA6NHM9 499 aa8.45□□□□□ -1.06
RTN4-215ENST00000491592 FUT2Q10981 343 aa8.45□□□□□ -1.06
RTN4-215ENST00000491592 RSBN1LQ6PCB5 846 aaPredicted RBP8.45□□□□□ -1.06
RTN4-215ENST00000491592 POLR3EQ9NVU0 708 aa8.45□□□□□ -1.06
RTN4-215ENST00000491592 LIMD1Q9UGP4 676 aa8.45□□□□□ -1.06
RTN4-215ENST00000491592 ACTN4O43707 911 aaKnown RBP8.44□□□□□ -1.06
RTN4-215ENST00000491592 GTF3C3Q9Y5Q9 886 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms