RNA–Protein interactions for RNA: ENST00000491490.5

RHBDD1-213, Transcript of rhomboid domain containing 1, humanhuman

TSL 1 (best)

Gene RHBDD1, Length 801 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD1-213ENST00000491490 KIF1BO60333 1816 aa11.17□□□□□ -0.62
RHBDD1-213ENST00000491490 ZEB1P37275 1124 aaPredicted RBP11.17□□□□□ -0.62
RHBDD1-213ENST00000491490 ZNF326Q5BKZ1 582 aaKnown RBP11.17□□□□□ -0.62
RHBDD1-213ENST00000491490 NOS1P29475 1434 aa11.17□□□□□ -0.62
RHBDD1-213ENST00000491490 PIK3C2BO00750 1634 aa11.16□□□□□ -0.62
RHBDD1-213ENST00000491490 POLA2Q14181 598 aa11.15□□□□□ -0.62
RHBDD1-213ENST00000491490 MYO3AQ8NEV4 1616 aa11.15□□□□□ -0.62
RHBDD1-213ENST00000491490 TNRQ92752 1358 aa11.15□□□□□ -0.63
RHBDD1-213ENST00000491490 MYO5BQ9ULV0 1848 aa11.14□□□□□ -0.63
RHBDD1-213ENST00000491490 STAG3Q9UJ98 1225 aa11.14□□□□□ -0.63
RHBDD1-213ENST00000491490 KDM2AQ9Y2K7 1162 aa11.14□□□□□ -0.63
RHBDD1-213ENST00000491490 ADGRB3O60242 1522 aa11.14□□□□□ -0.63
RHBDD1-213ENST00000491490 L3MBTL2Q969R5 705 aa11.13□□□□□ -0.63
RHBDD1-213ENST00000491490 PTPRMP28827 1452 aa11.12□□□□□ -0.63
RHBDD1-213ENST00000491490 SPATA31E1Q6ZUB1 1445 aa11.11□□□□□ -0.63
RHBDD1-213ENST00000491490 IDI1Q13907 227 aa11.11□□□□□ -0.63
RHBDD1-213ENST00000491490 NUTM2DQ5VT03 806 aaPredicted RBP11.11□□□□□ -0.63
RHBDD1-213ENST00000491490 DCAF11Q8TEB1 546 aa11.11□□□□□ -0.63
RHBDD1-213ENST00000491490 TMEM131LA2VDJ0 1609 aa11.1□□□□□ -0.63
RHBDD1-213ENST00000491490 UBR1Q8IWV7 1749 aa11.09□□□□□ -0.63
RHBDD1-213ENST00000491490 IFT172Q9UG01 1749 aa11.09□□□□□ -0.63
RHBDD1-213ENST00000491490 CEP170BQ9Y4F5 1589 aaPredicted RBP11.08□□□□□ -0.64
RHBDD1-213ENST00000491490 SLC52A1Q9NWF4 448 aa11.08□□□□□ -0.64
RHBDD1-213ENST00000491490 PPLO60437 1756 aa11.08□□□□□ -0.64
RHBDD1-213ENST00000491490 KDM4FA0A1W2PPD8 638 aa11.07□□□□□ -0.64
RHBDD1-213ENST00000491490 NEXMIFQ5QGS0 1516 aa11.07□□□□□ -0.64
RHBDD1-213ENST00000491490 A2ML1A8K2U0 1454 aa11.06□□□□□ -0.64
RHBDD1-213ENST00000491490 NLRP1Q9C000 1473 aa11.06□□□□□ -0.64
RHBDD1-213ENST00000491490 PPP1R15AO75807 674 aaPredicted RBP11.05□□□□□ -0.64
RHBDD1-213ENST00000491490 ZNF142P52746 1687 aaPredicted RBP11.04□□□□□ -0.64
RHBDD1-213ENST00000491490 NEURL4Q96JN8 1562 aa11.04□□□□□ -0.64
RHBDD1-213ENST00000491490 UHRF1BP1Q6BDS2 1440 aa11.04□□□□□ -0.64
RHBDD1-213ENST00000491490 PRAG1Q86YV5 1406 aa11.04□□□□□ -0.64
RHBDD1-213ENST00000491490 RIMS2Q9UQ26 1411 aa11.04□□□□□ -0.64
RHBDD1-213ENST00000491490 NBPF8Q3BBV2 869 aa11.04□□□□□ -0.64
RHBDD1-213ENST00000491490 TIMELESSQ9UNS1 1208 aa11.04□□□□□ -0.64
RHBDD1-213ENST00000491490 TRPM1Q7Z4N2 1603 aa11.03□□□□□ -0.64
RHBDD1-213ENST00000491490 BCANQ96GW7 911 aa11.03□□□□□ -0.64
RHBDD1-213ENST00000491490 MYOM2P54296 1465 aa11.03□□□□□ -0.64
RHBDD1-213ENST00000491490 ADGRF5Q8IZF2 1346 aa11.03□□□□□ -0.64
RHBDD1-213ENST00000491490 KDM5AP29375 1690 aaKnown RBP11.01□□□□□ -0.65
RHBDD1-213ENST00000491490 IQGAP1P46940 1657 aa11.01□□□□□ -0.65
RHBDD1-213ENST00000491490 ROCK2O75116 1388 aaKnown RBP11.01□□□□□ -0.65
RHBDD1-213ENST00000491490 RALGAPBQ86X10 1494 aa11□□□□□ -0.65
RHBDD1-213ENST00000491490 HIRIP3Q9BW71 556 aaPredicted RBP11□□□□□ -0.65
RHBDD1-213ENST00000491490 TMEM2Q9UHN6 1383 aa11□□□□□ -0.65
RHBDD1-213ENST00000491490 ATXN8OSP0DMR3 200 aa10.99□□□□□ -0.65
RHBDD1-213ENST00000491490 PIK3C2GO75747 1445 aa10.99□□□□□ -0.65
RHBDD1-213ENST00000491490 ZFYVE9O95405 1425 aa10.99□□□□□ -0.65
RHBDD1-213ENST00000491490 RPGRIP1LQ68CZ1 1315 aa10.98□□□□□ -0.65
RHBDD1-213ENST00000491490 VGFO15240 615 aaPredicted RBP10.97□□□□□ -0.65
RHBDD1-213ENST00000491490 HSPA2P54652 639 aa10.97□□□□□ -0.65
RHBDD1-213ENST00000491490 NBPF1Q3BBV0 1214 aa10.97□□□□□ -0.65
RHBDD1-213ENST00000491490 CFAP70Q5T0N1 1121 aa10.97□□□□□ -0.65
RHBDD1-213ENST00000491490 THEMISQ8N1K5 641 aaPredicted RBP10.97□□□□□ -0.65
RHBDD1-213ENST00000491490 POLR1AO95602 1720 aaPredicted RBP10.96□□□□□ -0.65
RHBDD1-213ENST00000491490 LAMC1P11047 1609 aa10.96□□□□□ -0.65
RHBDD1-213ENST00000491490 NRXN3Q9Y4C0 1643 aa10.96□□□□□ -0.65
RHBDD1-213ENST00000491490 SLIT1O75093 1534 aa10.96□□□□□ -0.65
RHBDD1-213ENST00000491490 SCAF11Q99590 1463 aaKnown RBP10.96□□□□□ -0.65
RHBDD1-213ENST00000491490 NRXN1Q9ULB1 1477 aa10.96□□□□□ -0.65
RHBDD1-213ENST00000491490 TXNDC2Q86VQ3 553 aa10.96□□□□□ -0.65
RHBDD1-213ENST00000491490 CARD11Q9BXL7 1154 aa10.96□□□□□ -0.65
RHBDD1-213ENST00000491490 EID1Q9Y6B2 187 aa10.96□□□□□ -0.65
RHBDD1-213ENST00000491490 ARHGAP23Q9P227 1491 aa10.95□□□□□ -0.66
RHBDD1-213ENST00000491490 LTKP29376 864 aa10.95□□□□□ -0.66
RHBDD1-213ENST00000491490 TMEM132EQ6IEE7 984 aa10.95□□□□□ -0.66
RHBDD1-213ENST00000491490 KIAA1210Q9ULL0 1709 aa10.95□□□□□ -0.66
RHBDD1-213ENST00000491490 ASXL1Q8IXJ9 1541 aa10.94□□□□□ -0.66
RHBDD1-213ENST00000491490 LMTK3Q96Q04 1460 aa10.94□□□□□ -0.66
RHBDD1-213ENST00000491490 USP47Q96K76 1375 aa10.94□□□□□ -0.66
RHBDD1-213ENST00000491490 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.94□□□□□ -0.66
RHBDD1-213ENST00000491490 ALKQ9UM73 1620 aa10.94□□□□□ -0.66
RHBDD1-213ENST00000491490 SLC26A8Q96RN1 970 aa10.93□□□□□ -0.66
RHBDD1-213ENST00000491490 STK26Q9P289 416 aa10.93□□□□□ -0.66
RHBDD1-213ENST00000491490 SETD1AO15047 1707 aaKnown RBP10.92□□□□□ -0.66
RHBDD1-213ENST00000491490 NCKAP5LQ9HCH0 1330 aa10.92□□□□□ -0.66
RHBDD1-213ENST00000491490 SETBP1Q9Y6X0 1596 aa10.92□□□□□ -0.66
RHBDD1-213ENST00000491490 HSPA5P11021 654 aaKnown RBP10.92□□□□□ -0.66
RHBDD1-213ENST00000491490 HDGFP51858 240 aaKnown RBP10.92□□□□□ -0.66
RHBDD1-213ENST00000491490 SETD1BQ9UPS6 1966 aaKnown RBP10.92□□□□□ -0.66
RHBDD1-213ENST00000491490 PLEKHG1Q9ULL1 1385 aa10.91□□□□□ -0.66
RHBDD1-213ENST00000491490 ADGRB1O14514 1584 aa10.91□□□□□ -0.66
RHBDD1-213ENST00000491490 EIF4G2P78344 907 aaKnown RBP eCLIP10.91□□□□□ -0.66
RHBDD1-213ENST00000491490 ANKLE2Q86XL3 938 aa10.91□□□□□ -0.66
RHBDD1-213ENST00000491490 TRAK1Q9UPV9 953 aa10.91□□□□□ -0.66
RHBDD1-213ENST00000491490 POLR3GLQ9BT43 218 aa10.9□□□□□ -0.66
RHBDD1-213ENST00000491490 SAFB2Q14151 953 aaKnown RBP eCLIP10.89□□□□□ -0.67
RHBDD1-213ENST00000491490 STAC3Q96MF2 364 aa10.89□□□□□ -0.67
RHBDD1-213ENST00000491490 C14orf93Q9H972 538 aaKnown RBP10.89□□□□□ -0.67
RHBDD1-213ENST00000491490 NPHP4O75161 1426 aaPredicted RBP10.89□□□□□ -0.67
RHBDD1-213ENST00000491490 ADAMTS13Q76LX8 1427 aa10.89□□□□□ -0.67
RHBDD1-213ENST00000491490 ARHGEF28Q8N1W1 1705 aaKnown RBP10.89□□□□□ -0.67
RHBDD1-213ENST00000491490 METP08581 1390 aa10.89□□□□□ -0.67
RHBDD1-213ENST00000491490 GPRASP1Q5JY77 1395 aa10.89□□□□□ -0.67
RHBDD1-213ENST00000491490 QRICH2Q9H0J4 1663 aa10.88□□□□□ -0.67
RHBDD1-213ENST00000491490 DIP2AQ14689 1571 aa10.87□□□□□ -0.67
RHBDD1-213ENST00000491490 YTHDC2Q9H6S0 1430 aaKnown RBP10.87□□□□□ -0.67
RHBDD1-213ENST00000491490 ST20-MTHFSA0A0A6YYL1 179 aa10.87□□□□□ -0.67
RHBDD1-213ENST00000491490 ZNF316A6NFI3 1004 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms