RNA–Protein interactions for RNA: ENST00000491328.1

BCKDHB-206, Transcript of branched chain keto acid dehydrogenase E1 subunit beta, humanhuman

TSL 2

Gene BCKDHB, Length 522 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHB-206ENST00000491328 ATP1B4Q9UN42 357 aaPredicted RBP11.13□□□□□ -0.63
BCKDHB-206ENST00000491328 MDM2Q00987 491 aaPredicted RBP11.12□□□□□ -0.63
BCKDHB-206ENST00000491328 GPCPD1Q9NPB8 672 aa11.12□□□□□ -0.63
BCKDHB-206ENST00000491328 NPDC1Q9NQX5 325 aaPredicted RBP11.12□□□□□ -0.63
BCKDHB-206ENST00000491328 LAPTM4BQ86VI4 370 aa11.11□□□□□ -0.63
BCKDHB-206ENST00000491328 TSKSQ9UJT2 592 aa11.11□□□□□ -0.63
BCKDHB-206ENST00000491328 APBB1O00213 710 aa11.1□□□□□ -0.63
BCKDHB-206ENST00000491328 SH3D19Q5HYK7 790 aa11.1□□□□□ -0.63
BCKDHB-206ENST00000491328 PACS2Q86VP3 889 aa11.1□□□□□ -0.63
BCKDHB-206ENST00000491328 ANKK1Q8NFD2 765 aa11.1□□□□□ -0.63
BCKDHB-206ENST00000491328 CDCA7LQ96GN5 454 aa11.1□□□□□ -0.63
BCKDHB-206ENST00000491328 ARID3CA6NKF2 412 aa11.09□□□□□ -0.63
BCKDHB-206ENST00000491328 PRSS12P56730 875 aa11.09□□□□□ -0.63
BCKDHB-206ENST00000491328 ZFRQ96KR1 1074 aaKnown RBP11.09□□□□□ -0.63
BCKDHB-206ENST00000491328 SSTR3P32745 418 aaPredicted RBP11.08□□□□□ -0.64
BCKDHB-206ENST00000491328 CERKQ8TCT0 537 aa11.08□□□□□ -0.64
BCKDHB-206ENST00000491328 BCAMP50895 628 aa11.07□□□□□ -0.64
BCKDHB-206ENST00000491328 FAM98CQ17RN3 349 aaKnown RBP11.07□□□□□ -0.64
BCKDHB-206ENST00000491328 C1orf115Q9H7X2 142 aa11.07□□□□□ -0.64
BCKDHB-206ENST00000491328 FAM198AQ9UFP1 575 aa11.07□□□□□ -0.64
BCKDHB-206ENST00000491328 TMUB1Q9BVT8 246 aa11.06□□□□□ -0.64
BCKDHB-206ENST00000491328 SMAPO00193 183 aa11.05□□□□□ -0.64
BCKDHB-206ENST00000491328 SKIV2LQ15477 1246 aaKnown RBP11.05□□□□□ -0.64
BCKDHB-206ENST00000491328 PHOX2BQ99453 314 aa11.05□□□□□ -0.64
BCKDHB-206ENST00000491328 BEGAINQ9BUH8 593 aa11.05□□□□□ -0.64
BCKDHB-206ENST00000491328 SOWAHBA6NEL2 793 aa11.04□□□□□ -0.64
BCKDHB-206ENST00000491328 OATP04181 439 aa11.04□□□□□ -0.64
BCKDHB-206ENST00000491328 A6NJR5 290 aa11.03□□□□□ -0.64
BCKDHB-206ENST00000491328 C3orf80F5H4A9 247 aa11.03□□□□□ -0.64
BCKDHB-206ENST00000491328 CLUAP1Q96AJ1 413 aa11.03□□□□□ -0.64
BCKDHB-206ENST00000491328 FAM161AQ3B820 660 aa11.02□□□□□ -0.65
BCKDHB-206ENST00000491328 METTL3Q86U44 580 aaKnown RBP11.02□□□□□ -0.65
BCKDHB-206ENST00000491328 PODXL2Q9NZ53 605 aa11.02□□□□□ -0.65
BCKDHB-206ENST00000491328 MCM6Q14566 821 aa11.01□□□□□ -0.65
BCKDHB-206ENST00000491328 FAM217BQ9NTX9 383 aaPredicted RBP11.01□□□□□ -0.65
BCKDHB-206ENST00000491328 TATDN2Q93075 761 aa11□□□□□ -0.65
BCKDHB-206ENST00000491328 PNMA3Q9UL41 463 aa11□□□□□ -0.65
BCKDHB-206ENST00000491328 NBPF26B4DH59 902 aa10.99□□□□□ -0.65
BCKDHB-206ENST00000491328 TRAK2O60296 914 aa10.99□□□□□ -0.65
BCKDHB-206ENST00000491328 PADI6Q6TGC4 694 aa10.99□□□□□ -0.65
BCKDHB-206ENST00000491328 LRCH3Q96II8 777 aa10.99□□□□□ -0.65
BCKDHB-206ENST00000491328 POLR3EQ9NVU0 708 aa10.99□□□□□ -0.65
BCKDHB-206ENST00000491328 WBP1LQ9NX94 342 aa10.99□□□□□ -0.65
BCKDHB-206ENST00000491328 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.99□□□□□ -0.65
BCKDHB-206ENST00000491328 NUDT18Q6ZVK8 323 aa10.98□□□□□ -0.65
BCKDHB-206ENST00000491328 NLRP7Q8WX94 980 aa10.98□□□□□ -0.65
BCKDHB-206ENST00000491328 RBM27Q9P2N5 1060 aaKnown RBP10.98□□□□□ -0.65
BCKDHB-206ENST00000491328 TTC13Q8NBP0 860 aa10.97□□□□□ -0.65
BCKDHB-206ENST00000491328 PROCA1Q8NCQ7 364 aaPredicted RBP10.97□□□□□ -0.65
BCKDHB-206ENST00000491328 RAD21O60216 631 aa10.96□□□□□ -0.65
BCKDHB-206ENST00000491328 PXYLP1Q8TE99 480 aa10.96□□□□□ -0.65
BCKDHB-206ENST00000491328 HPS5Q9UPZ3 1129 aa10.96□□□□□ -0.65
BCKDHB-206ENST00000491328 ADGRG1Q9Y653 693 aa10.96□□□□□ -0.65
BCKDHB-206ENST00000491328 SAMD7Q7Z3H4 446 aa10.95□□□□□ -0.66
BCKDHB-206ENST00000491328 TSR3Q9UJK0 312 aaKnown RBP10.95□□□□□ -0.66
BCKDHB-206ENST00000491328 MYSM1Q5VVJ2 828 aa10.93□□□□□ -0.66
BCKDHB-206ENST00000491328 PROSER2Q86WR7 435 aaPredicted RBP10.93□□□□□ -0.66
BCKDHB-206ENST00000491328 CCDC82Q8N4S0 544 aa10.93□□□□□ -0.66
BCKDHB-206ENST00000491328 CLK2P49760 499 aaKnown RBP10.92□□□□□ -0.66
BCKDHB-206ENST00000491328 DIXDC1Q155Q3 683 aa10.92□□□□□ -0.66
BCKDHB-206ENST00000491328 NYAP1Q6ZVC0 841 aa10.92□□□□□ -0.66
BCKDHB-206ENST00000491328 RBM46Q8TBY0 533 aaKnown RBP10.92□□□□□ -0.66
BCKDHB-206ENST00000491328 PPP4CP60510 307 aa10.91□□□□□ -0.66
BCKDHB-206ENST00000491328 TRIM26Q12899 539 aaPredicted RBP10.9□□□□□ -0.66
BCKDHB-206ENST00000491328 TBC1D2Q9BYX2 928 aa10.9□□□□□ -0.66
BCKDHB-206ENST00000491328 IFFO2Q5TF58 517 aa10.89□□□□□ -0.67
BCKDHB-206ENST00000491328 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.89□□□□□ -0.67
BCKDHB-206ENST00000491328 ZNF777Q9ULD5 760 aaPredicted RBP10.89□□□□□ -0.67
BCKDHB-206ENST00000491328 SPDYE5A6NIY4 337 aa10.88□□□□□ -0.67
BCKDHB-206ENST00000491328 HDGFP51858 240 aaKnown RBP10.88□□□□□ -0.67
BCKDHB-206ENST00000491328 EYA1Q99502 592 aa10.88□□□□□ -0.67
BCKDHB-206ENST00000491328 RNF40O75150 1001 aa10.87□□□□□ -0.67
BCKDHB-206ENST00000491328 POM121Q96HA1 1249 aa10.87□□□□□ -0.67
BCKDHB-206ENST00000491328 ITGBL1O95965 494 aaPredicted RBP10.86□□□□□ -0.67
BCKDHB-206ENST00000491328 PDIA4P13667 645 aaKnown RBP10.86□□□□□ -0.67
BCKDHB-206ENST00000491328 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.85□□□□□ -0.67
BCKDHB-206ENST00000491328 RFC5P40937 340 aa10.85□□□□□ -0.67
BCKDHB-206ENST00000491328 SWT1Q5T5J6 900 aaKnown RBP10.85□□□□□ -0.67
BCKDHB-206ENST00000491328 CCDC97Q96F63 343 aaPredicted RBP10.85□□□□□ -0.67
BCKDHB-206ENST00000491328 BANK1Q8NDB2 785 aa10.84□□□□□ -0.67
BCKDHB-206ENST00000491328 A0A0G2JS52 829 aa10.83□□□□□ -0.68
BCKDHB-206ENST00000491328 TMEM259Q4ZIN3 620 aa10.83□□□□□ -0.68
BCKDHB-206ENST00000491328 KCNC4Q03721 635 aa10.82□□□□□ -0.68
BCKDHB-206ENST00000491328 RIC3Q7Z5B4 369 aa10.82□□□□□ -0.68
BCKDHB-206ENST00000491328 FNBP4Q8N3X1 1017 aaPredicted RBP10.82□□□□□ -0.68
BCKDHB-206ENST00000491328 SERPINA10Q9UK55 444 aa10.82□□□□□ -0.68
BCKDHB-206ENST00000491328 RCCD1A6NED2 376 aa10.81□□□□□ -0.68
BCKDHB-206ENST00000491328 NUTM1Q86Y26 1132 aa10.81□□□□□ -0.68
BCKDHB-206ENST00000491328 SULF1Q8IWU6 871 aa10.81□□□□□ -0.68
BCKDHB-206ENST00000491328 SPIRE2Q8WWL2 714 aa10.81□□□□□ -0.68
BCKDHB-206ENST00000491328 SNRKQ9NRH2 765 aa10.81□□□□□ -0.68
BCKDHB-206ENST00000491328 LIMD1Q9UGP4 676 aa10.81□□□□□ -0.68
BCKDHB-206ENST00000491328 COG6Q9Y2V7 657 aa10.81□□□□□ -0.68
BCKDHB-206ENST00000491328 HRCP23327 699 aa10.8□□□□□ -0.68
BCKDHB-206ENST00000491328 SLF2Q8IX21 1173 aa10.79□□□□□ -0.68
BCKDHB-206ENST00000491328 APLP1P51693 650 aa10.78□□□□□ -0.68
BCKDHB-206ENST00000491328 ZNF330Q9Y3S2 320 aaPredicted RBP10.78□□□□□ -0.68
BCKDHB-206ENST00000491328 ZBTB7CA1YPR0 619 aa10.77□□□□□ -0.69
BCKDHB-206ENST00000491328 DDX11L8A8MPP1 907 aa10.77□□□□□ -0.69
BCKDHB-206ENST00000491328 CD46P15529 392 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms