RNA–Protein interactions for RNA: ENST00000491062.5

FXR1-220, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-220ENST00000491062 COL17A1Q9UMD9 1497 aaPredicted RBP16.51■□□□□ 0.23
FXR1-220ENST00000491062 TTC37Q6PGP7 1564 aa16.51■□□□□ 0.23
FXR1-220ENST00000491062 INSRP06213 1382 aa16.5■□□□□ 0.23
FXR1-220ENST00000491062 CCDC144AA2RUR9 1427 aa16.5■□□□□ 0.23
FXR1-220ENST00000491062 MAGI2Q86UL8 1455 aa16.5■□□□□ 0.23
FXR1-220ENST00000491062 SHROOM2Q13796 1616 aa16.5■□□□□ 0.23
FXR1-220ENST00000491062 HNRNPMP52272 730 aaKnown RBP eCLIP16.49■□□□□ 0.236e-6■■■■□ 20.3
FXR1-220ENST00000491062 A2MP01023 1474 aa16.49■□□□□ 0.23
FXR1-220ENST00000491062 RNF17Q9BXT8 1623 aaKnown RBP16.49■□□□□ 0.23
FXR1-220ENST00000491062 PLA2R1Q13018 1463 aa16.49■□□□□ 0.23
FXR1-220ENST00000491062 DCAF11Q8TEB1 546 aa16.49■□□□□ 0.23
FXR1-220ENST00000491062 FAM212AQ96EL1 285 aa16.49■□□□□ 0.23
FXR1-220ENST00000491062 ATP10AO60312 1499 aa16.48■□□□□ 0.23
FXR1-220ENST00000491062 PLEKHH2Q8IVE3 1493 aa16.48■□□□□ 0.23
FXR1-220ENST00000491062 GSE1Q14687 1217 aa16.47■□□□□ 0.23
FXR1-220ENST00000491062 MYT1LQ9UL68 1186 aa16.47■□□□□ 0.23
FXR1-220ENST00000491062 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.47■□□□□ 0.23
FXR1-220ENST00000491062 CCDC136Q96JN2 1154 aa16.46■□□□□ 0.22
FXR1-220ENST00000491062 KDM2AQ9Y2K7 1162 aa16.46■□□□□ 0.22
FXR1-220ENST00000491062 ARHGAP5Q13017 1502 aa16.46■□□□□ 0.22
FXR1-220ENST00000491062 NLRP13Q86W25 1043 aa16.45■□□□□ 0.22
FXR1-220ENST00000491062 TSPYL2Q9H2G4 693 aaPredicted RBP16.45■□□□□ 0.22
FXR1-220ENST00000491062 DUOX2Q9NRD8 1548 aa16.45■□□□□ 0.22
FXR1-220ENST00000491062 CHD1O14646 1710 aa16.44■□□□□ 0.22
FXR1-220ENST00000491062 WASHC2CQ9Y4E1 1318 aa16.43■□□□□ 0.22
FXR1-220ENST00000491062 BCL11AQ9H165 835 aa16.43■□□□□ 0.22
FXR1-220ENST00000491062 BLMP54132 1417 aaPredicted RBP16.42■□□□□ 0.22
FXR1-220ENST00000491062 ERBINQ96RT1 1412 aa16.42■□□□□ 0.22
FXR1-220ENST00000491062 RGL2O15211 777 aa16.42■□□□□ 0.22
FXR1-220ENST00000491062 CNGB1Q14028 1251 aaPredicted RBP16.42■□□□□ 0.22
FXR1-220ENST00000491062 PDE3BQ13370 1112 aa16.41■□□□□ 0.22
FXR1-220ENST00000491062 ABCC2Q92887 1545 aa16.41■□□□□ 0.22
FXR1-220ENST00000491062 RRP1P56182 461 aaKnown RBP16.41■□□□□ 0.22
FXR1-220ENST00000491062 NOP58Q9Y2X3 529 aaKnown RBP16.4■□□□□ 0.22
FXR1-220ENST00000491062 PER1O15534 1290 aaPredicted RBP16.39■□□□□ 0.21
FXR1-220ENST00000491062 IQGAP1P46940 1657 aa16.38■□□□□ 0.21
FXR1-220ENST00000491062 DISP3Q9P2K9 1392 aa16.37■□□□□ 0.21
FXR1-220ENST00000491062 TESK2Q96S53 571 aa16.37■□□□□ 0.21
FXR1-220ENST00000491062 MADDQ8WXG6 1647 aa16.36■□□□□ 0.21
FXR1-220ENST00000491062 ABCC1P33527 1531 aa16.36■□□□□ 0.21
FXR1-220ENST00000491062 RCAN3Q9UKA8 241 aa16.36■□□□□ 0.21
FXR1-220ENST00000491062 PYGBP11216 843 aa16.35■□□□□ 0.21
FXR1-220ENST00000491062 NBPF1Q3BBV0 1214 aa16.35■□□□□ 0.21
FXR1-220ENST00000491062 SPHKAPQ2M3C7 1700 aa16.34■□□□□ 0.21
FXR1-220ENST00000491062 ANP32AP39687 249 aaKnown RBP16.33■□□□□ 0.2
FXR1-220ENST00000491062 CEP152O94986 1710 aa16.33■□□□□ 0.2
FXR1-220ENST00000491062 IPO9Q96P70 1041 aaKnown RBP16.31■□□□□ 0.2
FXR1-220ENST00000491062 PLCH2O75038 1416 aa16.31■□□□□ 0.2
FXR1-220ENST00000491062 TRPM2O94759 1503 aa16.31■□□□□ 0.2
FXR1-220ENST00000491062 SYNMO15061 1565 aa16.31■□□□□ 0.2
FXR1-220ENST00000491062 ZCCHC11Q5TAX3 1644 aaKnown RBP16.31■□□□□ 0.2
FXR1-220ENST00000491062 DEPDC5O75140 1603 aa16.3■□□□□ 0.2
FXR1-220ENST00000491062 ARAP3Q8WWN8 1544 aa16.29■□□□□ 0.2
FXR1-220ENST00000491062 WDR7Q9Y4E6 1490 aa16.29■□□□□ 0.2
FXR1-220ENST00000491062 SENP3-EIF4A1A0A087X0R7 540 aa16.29■□□□□ 0.2
FXR1-220ENST00000491062 TCERG1O14776 1098 aaKnown RBP16.29■□□□□ 0.2
FXR1-220ENST00000491062 TMF1P82094 1093 aa16.29■□□□□ 0.2
FXR1-220ENST00000491062 RGL3Q3MIN7 710 aa16.29■□□□□ 0.2
FXR1-220ENST00000491062 EXOC6Q8TAG9 804 aa16.29■□□□□ 0.2
FXR1-220ENST00000491062 ERCC6L2Q5T890 1561 aa16.29■□□□□ 0.2
FXR1-220ENST00000491062 CLASP1Q7Z460 1538 aa16.29■□□□□ 0.2
FXR1-220ENST00000491062 UHRF1BP1LA0JNW5 1464 aa16.29■□□□□ 0.2
FXR1-220ENST00000491062 PAK3O75914 559 aaPredicted RBP16.28■□□□□ 0.2
FXR1-220ENST00000491062 RNF25Q96BH1 459 aaPredicted RBP16.28■□□□□ 0.2
FXR1-220ENST00000491062 KIAA1210Q9ULL0 1709 aa16.27■□□□□ 0.2
FXR1-220ENST00000491062 NEURL4Q96JN8 1562 aa16.27■□□□□ 0.2
FXR1-220ENST00000491062 SCAPERQ9BY12 1400 aa16.27■□□□□ 0.19
FXR1-220ENST00000491062 MS4A1P11836 297 aa16.26■□□□□ 0.19
FXR1-220ENST00000491062 PANK3Q9H999 370 aa16.26■□□□□ 0.19
FXR1-220ENST00000491062 MYOM1P52179 1685 aa16.26■□□□□ 0.19
FXR1-220ENST00000491062 ZFYVE16Q7Z3T8 1539 aa16.26■□□□□ 0.19
FXR1-220ENST00000491062 TET3O43151 1660 aa16.26■□□□□ 0.19
FXR1-220ENST00000491062 CLTCL1P53675 1640 aa16.25■□□□□ 0.19
FXR1-220ENST00000491062 RTEL1-TNFRSF6BF6WH68 1400 aa16.25■□□□□ 0.19
FXR1-220ENST00000491062 PTPRTO14522 1441 aa16.25■□□□□ 0.19
FXR1-220ENST00000491062 CD44P16070 742 aaKnown RBP16.23■□□□□ 0.19
FXR1-220ENST00000491062 CC2D1BQ5T0F9 858 aaKnown RBP16.23■□□□□ 0.19
FXR1-220ENST00000491062 SCAF11Q99590 1463 aaKnown RBP16.23■□□□□ 0.19
FXR1-220ENST00000491062 VWDEQ8N2E2 1590 aa16.23■□□□□ 0.19
FXR1-220ENST00000491062 STAC3Q96MF2 364 aa16.23■□□□□ 0.19
FXR1-220ENST00000491062 CCDC61Q9Y6R9 512 aa16.23■□□□□ 0.19
FXR1-220ENST00000491062 TRAPPC8Q9Y2L5 1435 aa16.22■□□□□ 0.19
FXR1-220ENST00000491062 CDCA7LQ96GN5 454 aa16.22■□□□□ 0.19
FXR1-220ENST00000491062 ASXL1Q8IXJ9 1541 aa16.21■□□□□ 0.19
FXR1-220ENST00000491062 PIK3C2GO75747 1445 aa16.21■□□□□ 0.19
FXR1-220ENST00000491062 INO80Q9ULG1 1556 aaPredicted RBP16.21■□□□□ 0.18
FXR1-220ENST00000491062 NPC1L1Q9UHC9 1359 aa16.21■□□□□ 0.18
FXR1-220ENST00000491062 DEKP35659 375 aaKnown RBP16.21■□□□□ 0.18
FXR1-220ENST00000491062 EFCAB2Q5VUJ9 269 aa16.21■□□□□ 0.18
FXR1-220ENST00000491062 ZRANB1Q9UGI0 708 aa16.2■□□□□ 0.18
FXR1-220ENST00000491062 KDM5AP29375 1690 aaKnown RBP16.2■□□□□ 0.18
FXR1-220ENST00000491062 SALL2Q9Y467 1007 aaPredicted RBP16.19■□□□□ 0.18
FXR1-220ENST00000491062 PDE4AP27815 886 aa16.18■□□□□ 0.18
FXR1-220ENST00000491062 BACH2Q9BYV9 841 aa16.18■□□□□ 0.18
FXR1-220ENST00000491062 ABCA9Q8IUA7 1624 aa16.17■□□□□ 0.18
FXR1-220ENST00000491062 CHRM1P11229 460 aaPredicted RBP16.17■□□□□ 0.18
FXR1-220ENST00000491062 CDCA8Q53HL2 280 aa16.17■□□□□ 0.18
FXR1-220ENST00000491062 ZNF521Q96K83 1311 aa16.16■□□□□ 0.18
FXR1-220ENST00000491062 MYOM2P54296 1465 aa16.16■□□□□ 0.18
FXR1-220ENST00000491062 RIOK3O14730 519 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms