RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 TSPY10P0CW01 314 aa13.39□□□□□ -0.27
RAB3GAP1-205ENST00000489858 IFNLR1Q8IU57 520 aaPredicted RBP13.39□□□□□ -0.27
RAB3GAP1-205ENST00000489858 SPOCK2Q92563 424 aa13.39□□□□□ -0.27
RAB3GAP1-205ENST00000489858 UNC13BO14795 1591 aa13.38□□□□□ -0.27
RAB3GAP1-205ENST00000489858 ARHGEF12Q9NZN5 1544 aa13.38□□□□□ -0.27
RAB3GAP1-205ENST00000489858 GOLGA2Q08379 1002 aa13.37□□□□□ -0.27
RAB3GAP1-205ENST00000489858 RSPH4AQ5TD94 716 aa13.37□□□□□ -0.27
RAB3GAP1-205ENST00000489858 CNTLNQ9NXG0 1405 aa13.37□□□□□ -0.27
RAB3GAP1-205ENST00000489858 PSEN1P49768 467 aa13.36□□□□□ -0.27
RAB3GAP1-205ENST00000489858 NUP155O75694 1391 aa13.35□□□□□ -0.27
RAB3GAP1-205ENST00000489858 MKRN3Q13064 507 aaKnown RBP13.35□□□□□ -0.27
RAB3GAP1-205ENST00000489858 PDCD7Q8N8D1 485 aaKnown RBP13.35□□□□□ -0.27
RAB3GAP1-205ENST00000489858 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.35□□□□□ -0.27
RAB3GAP1-205ENST00000489858 ST18O60284 1047 aa13.34□□□□□ -0.27
RAB3GAP1-205ENST00000489858 PKD2Q13563 968 aa13.34□□□□□ -0.27
RAB3GAP1-205ENST00000489858 CCDC7Q96M83 1385 aa13.33□□□□□ -0.27
RAB3GAP1-205ENST00000489858 HNRNPMP52272 730 aaKnown RBP eCLIP13.33□□□□□ -0.28
RAB3GAP1-205ENST00000489858 KCNH8Q96L42 1107 aa13.33□□□□□ -0.28
RAB3GAP1-205ENST00000489858 WASHC2AQ641Q2 1341 aa13.33□□□□□ -0.28
RAB3GAP1-205ENST00000489858 FAM135AQ9P2D6 1515 aa13.33□□□□□ -0.28
RAB3GAP1-205ENST00000489858 RALGAPBQ86X10 1494 aa13.32□□□□□ -0.28
RAB3GAP1-205ENST00000489858 NBPF8Q3BBV2 869 aa13.32□□□□□ -0.28
RAB3GAP1-205ENST00000489858 ABCC1P33527 1531 aa13.32□□□□□ -0.28
RAB3GAP1-205ENST00000489858 IQGAP3Q86VI3 1631 aa13.31□□□□□ -0.28
RAB3GAP1-205ENST00000489858 UHRF1BP1Q6BDS2 1440 aa13.31□□□□□ -0.28
RAB3GAP1-205ENST00000489858 ARAP3Q8WWN8 1544 aa13.31□□□□□ -0.28
RAB3GAP1-205ENST00000489858 DUOX2Q9NRD8 1548 aa13.31□□□□□ -0.28
RAB3GAP1-205ENST00000489858 PDAP1Q13442 181 aaKnown RBP13.31□□□□□ -0.28
RAB3GAP1-205ENST00000489858 SPATA31E1Q6ZUB1 1445 aa13.3□□□□□ -0.28
RAB3GAP1-205ENST00000489858 CIZ1Q9ULV3 898 aaPredicted RBP13.3□□□□□ -0.28
RAB3GAP1-205ENST00000489858 KDM5CP41229 1560 aa13.29□□□□□ -0.28
RAB3GAP1-205ENST00000489858 SNPHO15079 494 aa13.29□□□□□ -0.28
RAB3GAP1-205ENST00000489858 L3MBTL3Q96JM7 780 aaPredicted RBP13.29□□□□□ -0.28
RAB3GAP1-205ENST00000489858 PLCH2O75038 1416 aa13.29□□□□□ -0.28
RAB3GAP1-205ENST00000489858 MAGI2Q86UL8 1455 aa13.28□□□□□ -0.28
RAB3GAP1-205ENST00000489858 CDAN1Q8IWY9 1227 aa13.27□□□□□ -0.29
RAB3GAP1-205ENST00000489858 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.27□□□□□ -0.292e-7■□□□□ 9.3
RAB3GAP1-205ENST00000489858 ERBINQ96RT1 1412 aa13.27□□□□□ -0.29
RAB3GAP1-205ENST00000489858 ILDR1Q86SU0 546 aaPredicted RBP13.26□□□□□ -0.29
RAB3GAP1-205ENST00000489858 USP47Q96K76 1375 aa13.26□□□□□ -0.29
RAB3GAP1-205ENST00000489858 TMEM121BQ9BXQ6 578 aaPredicted RBP13.26□□□□□ -0.29
RAB3GAP1-205ENST00000489858 EFCAB2Q5VUJ9 269 aa13.24□□□□□ -0.29
RAB3GAP1-205ENST00000489858 C3orf67Q6ZVT6 689 aa13.24□□□□□ -0.29
RAB3GAP1-205ENST00000489858 SUPT16HQ9Y5B9 1047 aaKnown RBP13.24□□□□□ -0.29
RAB3GAP1-205ENST00000489858 KIF7Q2M1P5 1343 aa13.23□□□□□ -0.29
RAB3GAP1-205ENST00000489858 BCORL1Q5H9F3 1711 aa13.23□□□□□ -0.29
RAB3GAP1-205ENST00000489858 WDR7Q9Y4E6 1490 aa13.23□□□□□ -0.29
RAB3GAP1-205ENST00000489858 CCDC144AA2RUR9 1427 aa13.22□□□□□ -0.29
RAB3GAP1-205ENST00000489858 ARID4BQ4LE39 1312 aaPredicted RBP13.22□□□□□ -0.29
RAB3GAP1-205ENST00000489858 ABCA9Q8IUA7 1624 aa13.22□□□□□ -0.29
RAB3GAP1-205ENST00000489858 LAMC1P11047 1609 aa13.21□□□□□ -0.29
RAB3GAP1-205ENST00000489858 EIF2AK4Q9P2K8 1649 aaKnown RBP13.21□□□□□ -0.29
RAB3GAP1-205ENST00000489858 ZNF326Q5BKZ1 582 aaKnown RBP13.21□□□□□ -0.29
RAB3GAP1-205ENST00000489858 ZFYVE16Q7Z3T8 1539 aa13.21□□□□□ -0.29
RAB3GAP1-205ENST00000489858 TRPM1Q7Z4N2 1603 aa13.21□□□□□ -0.3
RAB3GAP1-205ENST00000489858 ROCK2O75116 1388 aaKnown RBP13.2□□□□□ -0.3
RAB3GAP1-205ENST00000489858 C11orf95C9JLR9 678 aaPredicted RBP13.19□□□□□ -0.3
RAB3GAP1-205ENST00000489858 RTEL1-TNFRSF6BF6WH68 1400 aa13.19□□□□□ -0.3
RAB3GAP1-205ENST00000489858 INO80Q9ULG1 1556 aaPredicted RBP13.19□□□□□ -0.3
RAB3GAP1-205ENST00000489858 ATP10AO60312 1499 aa13.18□□□□□ -0.3
RAB3GAP1-205ENST00000489858 CABP2Q9NPB3 220 aa13.18□□□□□ -0.3
RAB3GAP1-205ENST00000489858 DEPDC5O75140 1603 aa13.17□□□□□ -0.3
RAB3GAP1-205ENST00000489858 TRAPPC8Q9Y2L5 1435 aa13.17□□□□□ -0.3
RAB3GAP1-205ENST00000489858 NEFLP07196 543 aa13.17□□□□□ -0.3
RAB3GAP1-205ENST00000489858 PRKRIP1Q9H875 184 aaPredicted RBP13.17□□□□□ -0.3
RAB3GAP1-205ENST00000489858 PRAG1Q86YV5 1406 aa13.16□□□□□ -0.3
RAB3GAP1-205ENST00000489858 E9PCH4 1651 aa13.16□□□□□ -0.3
RAB3GAP1-205ENST00000489858 PLA2R1Q13018 1463 aa13.16□□□□□ -0.3
RAB3GAP1-205ENST00000489858 ATP7AQ04656 1500 aa13.15□□□□□ -0.3
RAB3GAP1-205ENST00000489858 CARD11Q9BXL7 1154 aa13.15□□□□□ -0.3
RAB3GAP1-205ENST00000489858 A2MP01023 1474 aa13.15□□□□□ -0.3
RAB3GAP1-205ENST00000489858 SPAG9O60271 1321 aaKnown RBP13.14□□□□□ -0.31
RAB3GAP1-205ENST00000489858 RNF17Q9BXT8 1623 aaKnown RBP13.14□□□□□ -0.31
RAB3GAP1-205ENST00000489858 CFAP74Q9C0B2 1584 aa13.14□□□□□ -0.31
RAB3GAP1-205ENST00000489858 TET3O43151 1660 aa13.14□□□□□ -0.31
RAB3GAP1-205ENST00000489858 FANCAO15360 1455 aa13.13□□□□□ -0.31
RAB3GAP1-205ENST00000489858 DHX29Q7Z478 1369 aaKnown RBP13.13□□□□□ -0.31
RAB3GAP1-205ENST00000489858 HNRNPUQ00839 825 aaKnown RBP eCLIP13.13□□□□□ -0.31
RAB3GAP1-205ENST00000489858 DPY19L2Q6NUT2 758 aa13.13□□□□□ -0.31
RAB3GAP1-205ENST00000489858 DCAF11Q8TEB1 546 aa13.13□□□□□ -0.31
RAB3GAP1-205ENST00000489858 SPHKAPQ2M3C7 1700 aa13.13□□□□□ -0.31
RAB3GAP1-205ENST00000489858 TRPM2O94759 1503 aa13.13□□□□□ -0.31
RAB3GAP1-205ENST00000489858 PRDM15P57071 1507 aaPredicted RBP13.13□□□□□ -0.31
RAB3GAP1-205ENST00000489858 CEP152O94986 1710 aa13.12□□□□□ -0.31
RAB3GAP1-205ENST00000489858 GPRASP1Q5JY77 1395 aa13.11□□□□□ -0.31
RAB3GAP1-205ENST00000489858 MRS2Q9HD23 443 aa13.11□□□□□ -0.31
RAB3GAP1-205ENST00000489858 ADGRL1O94910 1474 aa13.1□□□□□ -0.31
RAB3GAP1-205ENST00000489858 KDM2AQ9Y2K7 1162 aa13.1□□□□□ -0.31
RAB3GAP1-205ENST00000489858 ASXL2Q76L83 1435 aa13.1□□□□□ -0.31
RAB3GAP1-205ENST00000489858 VWDEQ8N2E2 1590 aa13.09□□□□□ -0.31
RAB3GAP1-205ENST00000489858 MARVELD3Q96A59 401 aa13.09□□□□□ -0.31
RAB3GAP1-205ENST00000489858 BOLA1Q9Y3E2 137 aa13.09□□□□□ -0.31
RAB3GAP1-205ENST00000489858 KANK1Q14678 1352 aa13.08□□□□□ -0.31
RAB3GAP1-205ENST00000489858 G3V3G9 751 aa13.08□□□□□ -0.32
RAB3GAP1-205ENST00000489858 POLR3GLQ9BT43 218 aa13.08□□□□□ -0.32
RAB3GAP1-205ENST00000489858 MADDQ8WXG6 1647 aa13.08□□□□□ -0.32
RAB3GAP1-205ENST00000489858 KTN1Q86UP2 1357 aaKnown RBP13.07□□□□□ -0.32
RAB3GAP1-205ENST00000489858 COL17A1Q9UMD9 1497 aaPredicted RBP13.07□□□□□ -0.32
RAB3GAP1-205ENST00000489858 NEURL4Q96JN8 1562 aa13.06□□□□□ -0.32
RAB3GAP1-205ENST00000489858 CLTCL1P53675 1640 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms