RNA–Protein interactions for RNA: ENST00000489852.1

SDHAF3-204, Transcript of succinate dehydrogenase complex assembly factor 3, humanhuman

TSL 3

Gene SDHAF3, Length 360 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3-204ENST00000489852 MROH1Q8NDA8 1641 aa23.79■■□□□ 1.4
SDHAF3-204ENST00000489852 EIF2AK4Q9P2K8 1649 aaKnown RBP23.77■■□□□ 1.4
SDHAF3-204ENST00000489852 EFCAB6Q5THR3 1501 aa23.77■■□□□ 1.4
SDHAF3-204ENST00000489852 ARHGAP31Q2M1Z3 1444 aa23.76■■□□□ 1.39
SDHAF3-204ENST00000489852 C14orf37Q86TY3 774 aa23.75■■□□□ 1.39
SDHAF3-204ENST00000489852 CEP162Q5TB80 1403 aa23.75■■□□□ 1.39
SDHAF3-204ENST00000489852 EHBP1L1Q8N3D4 1523 aa23.74■■□□□ 1.39
SDHAF3-204ENST00000489852 ARHGEF5Q12774 1597 aa23.74■■□□□ 1.39
SDHAF3-204ENST00000489852 C8orf37Q96NL8 207 aa23.74■■□□□ 1.39
SDHAF3-204ENST00000489852 CADPS2Q86UW7 1296 aa23.72■■□□□ 1.39
SDHAF3-204ENST00000489852 NGLY1Q96IV0 654 aa23.72■■□□□ 1.39
SDHAF3-204ENST00000489852 DIP2AQ14689 1571 aa23.72■■□□□ 1.39
SDHAF3-204ENST00000489852 NCOA3Q9Y6Q9 1424 aa23.7■■□□□ 1.38
SDHAF3-204ENST00000489852 ATF3P18847 181 aa23.7■■□□□ 1.38
SDHAF3-204ENST00000489852 IDI1Q13907 227 aa23.7■■□□□ 1.38
SDHAF3-204ENST00000489852 CHD2O14647 1828 aaKnown RBP23.68■■□□□ 1.38
SDHAF3-204ENST00000489852 C19orf44Q9H6X5 657 aa23.67■■□□□ 1.38
SDHAF3-204ENST00000489852 BRINP3Q76B58 766 aa23.66■■□□□ 1.38
SDHAF3-204ENST00000489852 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.65■■□□□ 1.38
SDHAF3-204ENST00000489852 MAST1Q9Y2H9 1570 aa23.64■■□□□ 1.37
SDHAF3-204ENST00000489852 SETD5Q9C0A6 1442 aa23.62■■□□□ 1.37
SDHAF3-204ENST00000489852 CCDC125Q86Z20 511 aa23.62■■□□□ 1.37
SDHAF3-204ENST00000489852 LRRC59Q96AG4 307 aaKnown RBP23.6■■□□□ 1.37
SDHAF3-204ENST00000489852 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.59■■□□□ 1.37
SDHAF3-204ENST00000489852 EP400Q96L91 3159 aa23.59■■□□□ 1.37
SDHAF3-204ENST00000489852 DUOX2Q9NRD8 1548 aa23.59■■□□□ 1.37
SDHAF3-204ENST00000489852 ADGRB3O60242 1522 aa23.58■■□□□ 1.36
SDHAF3-204ENST00000489852 PLEKHG1Q9ULL1 1385 aa23.57■■□□□ 1.36
SDHAF3-204ENST00000489852 PPP1R15AO75807 674 aaPredicted RBP23.55■■□□□ 1.36
SDHAF3-204ENST00000489852 ADAMTS2O95450 1211 aa23.55■■□□□ 1.36
SDHAF3-204ENST00000489852 TBX22Q9Y458 520 aa23.55■■□□□ 1.36
SDHAF3-204ENST00000489852 ASXL1Q8IXJ9 1541 aa23.54■■□□□ 1.36
SDHAF3-204ENST00000489852 USP21Q9UK80 565 aa23.53■■□□□ 1.36
SDHAF3-204ENST00000489852 TRPC5Q9UL62 973 aaPredicted RBP23.53■■□□□ 1.36
SDHAF3-204ENST00000489852 PNPLA6Q8IY17 1366 aa23.52■■□□□ 1.36
SDHAF3-204ENST00000489852 KANK1Q14678 1352 aa23.52■■□□□ 1.36
SDHAF3-204ENST00000489852 LRP5O75197 1615 aa23.51■■□□□ 1.35
SDHAF3-204ENST00000489852 HDGFP51858 240 aaKnown RBP23.51■■□□□ 1.35
SDHAF3-204ENST00000489852 SLC52A1Q9NWF4 448 aa23.51■■□□□ 1.35
SDHAF3-204ENST00000489852 NHSL1Q5SYE7 1610 aa23.5■■□□□ 1.35
SDHAF3-204ENST00000489852 ZFYVE9O95405 1425 aa23.5■■□□□ 1.35
SDHAF3-204ENST00000489852 NOS1P29475 1434 aa23.47■■□□□ 1.35
SDHAF3-204ENST00000489852 ERBINQ96RT1 1412 aa23.47■■□□□ 1.35
SDHAF3-204ENST00000489852 KIF15Q9NS87 1388 aa23.46■■□□□ 1.35
SDHAF3-204ENST00000489852 RIMS2Q9UQ26 1411 aa23.46■■□□□ 1.35
SDHAF3-204ENST00000489852 DDX17Q92841 729 aaKnown RBP23.45■■□□□ 1.34
SDHAF3-204ENST00000489852 DCCP43146 1447 aa23.44■■□□□ 1.34
SDHAF3-204ENST00000489852 RRP7BPQ9NSQ0 103 aa23.43■■□□□ 1.34
SDHAF3-204ENST00000489852 LMTK2Q8IWU2 1503 aa23.43■■□□□ 1.34
SDHAF3-204ENST00000489852 ATRNO75882 1429 aa23.42■■□□□ 1.34
SDHAF3-204ENST00000489852 PIK3R4Q99570 1358 aa23.42■■□□□ 1.34
SDHAF3-204ENST00000489852 FNBP4Q8N3X1 1017 aaPredicted RBP23.42■■□□□ 1.34
SDHAF3-204ENST00000489852 MST1RQ04912 1400 aa23.42■■□□□ 1.34
SDHAF3-204ENST00000489852 ADAMTS13Q76LX8 1427 aa23.41■■□□□ 1.34
SDHAF3-204ENST00000489852 AMOTL2Q9Y2J4 779 aa23.4■■□□□ 1.34
SDHAF3-204ENST00000489852 BLMP54132 1417 aaPredicted RBP23.4■■□□□ 1.34
SDHAF3-204ENST00000489852 MYO5BQ9ULV0 1848 aa23.4■■□□□ 1.34
SDHAF3-204ENST00000489852 DEFB132Q7Z7B7 95 aa23.39■■□□□ 1.33
SDHAF3-204ENST00000489852 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.38■■□□□ 1.33
SDHAF3-204ENST00000489852 MYOM3Q5VTT5 1437 aa23.35■■□□□ 1.33
SDHAF3-204ENST00000489852 PTCH1Q13635 1447 aa23.34■■□□□ 1.33
SDHAF3-204ENST00000489852 SF3B2Q13435 895 aaKnown RBP23.34■■□□□ 1.33
SDHAF3-204ENST00000489852 GCC2Q8IWJ2 1684 aa23.34■■□□□ 1.33
SDHAF3-204ENST00000489852 PTPRUQ92729 1446 aa23.33■■□□□ 1.32
SDHAF3-204ENST00000489852 TMEM131LA2VDJ0 1609 aa23.32■■□□□ 1.32
SDHAF3-204ENST00000489852 TRPM2O94759 1503 aa23.32■■□□□ 1.32
SDHAF3-204ENST00000489852 PSDA5PKW4 1024 aaPredicted RBP23.3■■□□□ 1.32
SDHAF3-204ENST00000489852 HRCP23327 699 aa23.3■■□□□ 1.32
SDHAF3-204ENST00000489852 GJD4Q96KN9 370 aaPredicted RBP23.3■■□□□ 1.32
SDHAF3-204ENST00000489852 CHGAP10645 457 aaKnown RBP23.29■■□□□ 1.32
SDHAF3-204ENST00000489852 YY1P25490 414 aa23.29■■□□□ 1.32
SDHAF3-204ENST00000489852 BCL9LQ86UU0 1499 aa23.27■■□□□ 1.32
SDHAF3-204ENST00000489852 RPRD2Q5VT52 1461 aaKnown RBP23.25■■□□□ 1.31
SDHAF3-204ENST00000489852 SOS2Q07890 1332 aaPredicted RBP23.24■■□□□ 1.31
SDHAF3-204ENST00000489852 ABCC5O15440 1437 aa23.24■■□□□ 1.31
SDHAF3-204ENST00000489852 CROCC2H7BZ55 1655 aa23.23■■□□□ 1.31
SDHAF3-204ENST00000489852 UNC13BO14795 1591 aa23.21■■□□□ 1.31
SDHAF3-204ENST00000489852 XRN1Q8IZH2 1706 aaKnown RBP23.21■■□□□ 1.31
SDHAF3-204ENST00000489852 LAMC1P11047 1609 aa23.2■■□□□ 1.3
SDHAF3-204ENST00000489852 ADGRL3Q9HAR2 1447 aa23.2■■□□□ 1.3
SDHAF3-204ENST00000489852 C1orf167Q5SNV9 1468 aa23.19■■□□□ 1.3
SDHAF3-204ENST00000489852 COL22A1Q8NFW1 1626 aaPredicted RBP23.17■■□□□ 1.3
SDHAF3-204ENST00000489852 BRWD3Q6RI45 1802 aa23.15■■□□□ 1.3
SDHAF3-204ENST00000489852 ORAI2Q96SN7 254 aa23.15■■□□□ 1.3
SDHAF3-204ENST00000489852 MYOM2P54296 1465 aa23.15■■□□□ 1.3
SDHAF3-204ENST00000489852 RALGAPBQ86X10 1494 aa23.15■■□□□ 1.3
SDHAF3-204ENST00000489852 ANKRD30AQ9BXX3 1397 aa23.14■■□□□ 1.3
SDHAF3-204ENST00000489852 SPHKAPQ2M3C7 1700 aa23.14■■□□□ 1.3
SDHAF3-204ENST00000489852 CHIC2Q9UKJ5 165 aa23.14■■□□□ 1.29
SDHAF3-204ENST00000489852 GLI3P10071 1580 aa23.14■■□□□ 1.29
SDHAF3-204ENST00000489852 NALCNQ8IZF0 1738 aa23.13■■□□□ 1.29
SDHAF3-204ENST00000489852 BAG6P46379 1132 aa23.13■■□□□ 1.29
SDHAF3-204ENST00000489852 IFFO2Q5TF58 517 aa23.13■■□□□ 1.29
SDHAF3-204ENST00000489852 DAPK1P53355 1430 aa23.13■■□□□ 1.29
SDHAF3-204ENST00000489852 MARF1Q9Y4F3 1742 aaKnown RBP23.13■■□□□ 1.29
SDHAF3-204ENST00000489852 UNC5CLQ8IV45 518 aa23.12■■□□□ 1.29
SDHAF3-204ENST00000489852 SEPT12Q8IYM1 358 aa23.11■■□□□ 1.29
SDHAF3-204ENST00000489852 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.11■■□□□ 1.29
SDHAF3-204ENST00000489852 R3HDM1Q15032 1099 aaKnown RBP23.09■■□□□ 1.29
SDHAF3-204ENST00000489852 METP08581 1390 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms