RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 HDGFP51858 240 aaKnown RBP12.14□□□□□ -0.47
VPS26A-206ENST00000489794 FAM98CQ17RN3 349 aaKnown RBP12.14□□□□□ -0.47
VPS26A-206ENST00000489794 SULF1Q8IWU6 871 aa12.14□□□□□ -0.47
VPS26A-206ENST00000489794 TMEM134Q9H6X4 195 aa12.14□□□□□ -0.47
VPS26A-206ENST00000489794 SLC4A3P48751 1232 aa12.13□□□□□ -0.47
VPS26A-206ENST00000489794 BHMG1C9JSJ3 638 aaPredicted RBP12.11□□□□□ -0.47
VPS26A-206ENST00000489794 C3orf80F5H4A9 247 aa12.11□□□□□ -0.47
VPS26A-206ENST00000489794 RSPH4AQ5TD94 716 aa12.11□□□□□ -0.47
VPS26A-206ENST00000489794 FAM217BQ9NTX9 383 aaPredicted RBP12.11□□□□□ -0.47
VPS26A-206ENST00000489794 HCSTQ9UBK5 93 aa12.11□□□□□ -0.47
VPS26A-206ENST00000489794 SMAPO00193 183 aa12.1□□□□□ -0.47
VPS26A-206ENST00000489794 SSTR3P32745 418 aaPredicted RBP12.1□□□□□ -0.47
VPS26A-206ENST00000489794 MRPL50Q8N5N7 158 aaKnown RBP12.1□□□□□ -0.47
VPS26A-206ENST00000489794 REPIN1Q9BWE0 567 aaKnown RBP12.09□□□□□ -0.47
VPS26A-206ENST00000489794 SEPT9Q9UHD8 586 aaPredicted RBP12.08□□□□□ -0.48
VPS26A-206ENST00000489794 MS4A1P11836 297 aa12.06□□□□□ -0.48
VPS26A-206ENST00000489794 NLRP7Q8WX94 980 aa12.06□□□□□ -0.48
VPS26A-206ENST00000489794 FAM117AQ9C073 453 aa12.06□□□□□ -0.48
VPS26A-206ENST00000489794 DIXDC1Q155Q3 683 aa12.05□□□□□ -0.48
VPS26A-206ENST00000489794 IL27Q8NEV9 243 aa12.05□□□□□ -0.48
VPS26A-206ENST00000489794 NECTIN2Q92692 538 aa12.05□□□□□ -0.48
VPS26A-206ENST00000489794 SLF2Q8IX21 1173 aa12.04□□□□□ -0.48
VPS26A-206ENST00000489794 GOLGA8CPA6NN73 597 aa12.03□□□□□ -0.48
VPS26A-206ENST00000489794 ZFRQ96KR1 1074 aaKnown RBP12.03□□□□□ -0.48
VPS26A-206ENST00000489794 SWT1Q5T5J6 900 aaKnown RBP12.02□□□□□ -0.49
VPS26A-206ENST00000489794 KCTD12Q96CX2 325 aaKnown RBP12.02□□□□□ -0.49
VPS26A-206ENST00000489794 BEGAINQ9BUH8 593 aa12.02□□□□□ -0.49
VPS26A-206ENST00000489794 RSPH6AQ9H0K4 717 aa12.02□□□□□ -0.49
VPS26A-206ENST00000489794 GOPCQ9HD26 462 aa12.02□□□□□ -0.49
VPS26A-206ENST00000489794 DDX11L8A8MPP1 907 aa12.01□□□□□ -0.49
VPS26A-206ENST00000489794 CD46P15529 392 aa12□□□□□ -0.49
VPS26A-206ENST00000489794 PLEKHG3A1L390 1219 aa11.99□□□□□ -0.49
VPS26A-206ENST00000489794 SAMD7Q7Z3H4 446 aa11.99□□□□□ -0.49
VPS26A-206ENST00000489794 RDH13Q8NBN7 331 aa11.98□□□□□ -0.49
VPS26A-206ENST00000489794 ANKK1Q8NFD2 765 aa11.98□□□□□ -0.49
VPS26A-206ENST00000489794 LRCH3Q96II8 777 aa11.98□□□□□ -0.49
VPS26A-206ENST00000489794 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.97□□□□□ -0.49
VPS26A-206ENST00000489794 NUTM1Q86Y26 1132 aa11.95□□□□□ -0.5
VPS26A-206ENST00000489794 PLA2G2EQ9NZK7 142 aa11.95□□□□□ -0.5
VPS26A-206ENST00000489794 SH3D19Q5HYK7 790 aa11.94□□□□□ -0.5
VPS26A-206ENST00000489794 USP46P62068 366 aa11.93□□□□□ -0.5
VPS26A-206ENST00000489794 SOWAHBA6NEL2 793 aa11.92□□□□□ -0.5
VPS26A-206ENST00000489794 GCGRP47871 477 aa11.92□□□□□ -0.5
VPS26A-206ENST00000489794 WNT2BQ93097 391 aa11.92□□□□□ -0.5
VPS26A-206ENST00000489794 PRR14Q9BWN1 585 aa11.92□□□□□ -0.5
VPS26A-206ENST00000489794 RNF40O75150 1001 aa11.91□□□□□ -0.5
VPS26A-206ENST00000489794 SKIV2LQ15477 1246 aaKnown RBP11.91□□□□□ -0.5
VPS26A-206ENST00000489794 KDM4AO75164 1064 aa11.9□□□□□ -0.5
VPS26A-206ENST00000489794 SLC10A3P09131 477 aa11.9□□□□□ -0.5
VPS26A-206ENST00000489794 PTPN5P54829 565 aa11.9□□□□□ -0.5
VPS26A-206ENST00000489794 KMT5BQ4FZB7 885 aa11.9□□□□□ -0.5
VPS26A-206ENST00000489794 GRIPAP1Q4V328 841 aa11.9□□□□□ -0.5
VPS26A-206ENST00000489794 PCMTD1Q96MG8 357 aaPredicted RBP11.9□□□□□ -0.5
VPS26A-206ENST00000489794 TBC1D2Q9BYX2 928 aa11.9□□□□□ -0.5
VPS26A-206ENST00000489794 GJA5P36382 358 aa11.89□□□□□ -0.51
VPS26A-206ENST00000489794 PPP4CP60510 307 aa11.88□□□□□ -0.51
VPS26A-206ENST00000489794 THSD4Q6ZMP0 1018 aa11.88□□□□□ -0.51
VPS26A-206ENST00000489794 SPIRE2Q8WWL2 714 aa11.88□□□□□ -0.51
VPS26A-206ENST00000489794 CFHP08603 1231 aa11.87□□□□□ -0.51
VPS26A-206ENST00000489794 MYSM1Q5VVJ2 828 aa11.87□□□□□ -0.51
VPS26A-206ENST00000489794 TSR3Q9UJK0 312 aaKnown RBP11.87□□□□□ -0.51
VPS26A-206ENST00000489794 GTF3C3Q9Y5Q9 886 aa11.86□□□□□ -0.51
VPS26A-206ENST00000489794 TUSC1Q2TAM9 212 aa11.85□□□□□ -0.51
VPS26A-206ENST00000489794 HPS5Q9UPZ3 1129 aa11.85□□□□□ -0.51
VPS26A-206ENST00000489794 CLK2P49760 499 aaKnown RBP11.84□□□□□ -0.51
VPS26A-206ENST00000489794 BCAMP50895 628 aa11.83□□□□□ -0.52
VPS26A-206ENST00000489794 NYAP1Q6ZVC0 841 aa11.83□□□□□ -0.52
VPS26A-206ENST00000489794 SPTLC1O15269 473 aa11.82□□□□□ -0.52
VPS26A-206ENST00000489794 RIC3Q7Z5B4 369 aa11.82□□□□□ -0.52
VPS26A-206ENST00000489794 HOXA2O43364 376 aa11.81□□□□□ -0.52
VPS26A-206ENST00000489794 ACTN4O43707 911 aaKnown RBP11.81□□□□□ -0.52
VPS26A-206ENST00000489794 ATP6V1AP38606 617 aa11.81□□□□□ -0.52
VPS26A-206ENST00000489794 ERICH6Q7L0X2 663 aa11.81□□□□□ -0.52
VPS26A-206ENST00000489794 ATP1B4Q9UN42 357 aaPredicted RBP11.81□□□□□ -0.52
VPS26A-206ENST00000489794 RSBN1LQ6PCB5 846 aaPredicted RBP11.8□□□□□ -0.52
VPS26A-206ENST00000489794 POLR3EQ9NVU0 708 aa11.8□□□□□ -0.52
VPS26A-206ENST00000489794 MOXD2PA6NHM9 499 aa11.79□□□□□ -0.52
VPS26A-206ENST00000489794 FUT2Q10981 343 aa11.78□□□□□ -0.52
VPS26A-206ENST00000489794 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.77□□□□□ -0.53
VPS26A-206ENST00000489794 PRPF38BQ5VTL8 546 aaKnown RBP11.76□□□□□ -0.53
VPS26A-206ENST00000489794 FDX1P10109 184 aa11.75□□□□□ -0.53
VPS26A-206ENST00000489794 IFFO2Q5TF58 517 aa11.75□□□□□ -0.53
VPS26A-206ENST00000489794 WBP1LQ9NX94 342 aa11.75□□□□□ -0.53
VPS26A-206ENST00000489794 NDUFV2P19404 249 aa11.74□□□□□ -0.53
VPS26A-206ENST00000489794 PROCA1Q8NCQ7 364 aaPredicted RBP11.74□□□□□ -0.53
VPS26A-206ENST00000489794 LIMD1Q9UGP4 676 aa11.74□□□□□ -0.53
VPS26A-206ENST00000489794 APLP1P51693 650 aa11.73□□□□□ -0.53
VPS26A-206ENST00000489794 Q3C1V9 767 aa11.73□□□□□ -0.53
VPS26A-206ENST00000489794 SPDYE5A6NIY4 337 aa11.72□□□□□ -0.53
VPS26A-206ENST00000489794 MORN1Q5T089 497 aa11.72□□□□□ -0.53
VPS26A-206ENST00000489794 PPP2R2DQ66LE6 453 aa11.72□□□□□ -0.53
VPS26A-206ENST00000489794 ZBTB3Q9H5J0 574 aa11.72□□□□□ -0.53
VPS26A-206ENST00000489794 PCDHB3Q9Y5E6 796 aa11.72□□□□□ -0.53
VPS26A-206ENST00000489794 NR1I2O75469 434 aa11.71□□□□□ -0.53
VPS26A-206ENST00000489794 NUTM2BA6NNL0 878 aaPredicted RBP11.69□□□□□ -0.54
VPS26A-206ENST00000489794 NUTM2EB1AL46 878 aaPredicted RBP11.69□□□□□ -0.54
VPS26A-206ENST00000489794 LILRB3O75022 631 aa11.69□□□□□ -0.54
VPS26A-206ENST00000489794 NUTM2DQ5VT03 806 aaPredicted RBP11.69□□□□□ -0.54
VPS26A-206ENST00000489794 NUTM2AQ8IVF1 878 aaPredicted RBP11.69□□□□□ -0.54
VPS26A-206ENST00000489794 SALL2Q9Y467 1007 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms