RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 TET3O43151 1660 aa17.59■□□□□ 0.41
GGPS1-207ENST00000489692 UNC13BO14795 1591 aa17.59■□□□□ 0.41
GGPS1-207ENST00000489692 RIMS2Q9UQ26 1411 aa17.59■□□□□ 0.41
GGPS1-207ENST00000489692 KCNA6P17658 529 aa17.59■□□□□ 0.41
GGPS1-207ENST00000489692 PROSER2Q86WR7 435 aaPredicted RBP17.59■□□□□ 0.41
GGPS1-207ENST00000489692 ZNF326Q5BKZ1 582 aaKnown RBP17.57■□□□□ 0.4
GGPS1-207ENST00000489692 RBM33Q96EV2 1170 aaKnown RBP17.57■□□□□ 0.4
GGPS1-207ENST00000489692 TMEM94Q12767 1356 aa17.54■□□□□ 0.4
GGPS1-207ENST00000489692 PLEKHG1Q9ULL1 1385 aa17.54■□□□□ 0.4
GGPS1-207ENST00000489692 C14orf37Q86TY3 774 aa17.53■□□□□ 0.4
GGPS1-207ENST00000489692 IQGAP3Q86VI3 1631 aa17.53■□□□□ 0.4
GGPS1-207ENST00000489692 NAIPQ13075 1403 aa17.53■□□□□ 0.4
GGPS1-207ENST00000489692 ZEB1P37275 1124 aaPredicted RBP17.52■□□□□ 0.4
GGPS1-207ENST00000489692 ZFYVE9O95405 1425 aa17.51■□□□□ 0.39
GGPS1-207ENST00000489692 KDM5AP29375 1690 aaKnown RBP17.51■□□□□ 0.39
GGPS1-207ENST00000489692 GCC2Q8IWJ2 1684 aa17.51■□□□□ 0.39
GGPS1-207ENST00000489692 SLC4A1APQ9BWU0 796 aaKnown RBP17.5■□□□□ 0.39
GGPS1-207ENST00000489692 TBX22Q9Y458 520 aa17.5■□□□□ 0.39
GGPS1-207ENST00000489692 E9PCH4 1651 aa17.49■□□□□ 0.39
GGPS1-207ENST00000489692 ILDR2Q71H61 639 aa17.48■□□□□ 0.39
GGPS1-207ENST00000489692 STRCP1A6NGW2 1772 aa17.48■□□□□ 0.39
GGPS1-207ENST00000489692 HFM1A2PYH4 1435 aa17.47■□□□□ 0.39
GGPS1-207ENST00000489692 TMEM131LA2VDJ0 1609 aa17.47■□□□□ 0.39
GGPS1-207ENST00000489692 MSH6P52701 1360 aa17.47■□□□□ 0.39
GGPS1-207ENST00000489692 PHF23Q9BUL5 403 aaPredicted RBP17.46■□□□□ 0.39
GGPS1-207ENST00000489692 NKTRP30414 1462 aaKnown RBP17.44■□□□□ 0.38
GGPS1-207ENST00000489692 AMOTL2Q9Y2J4 779 aa17.42■□□□□ 0.38
GGPS1-207ENST00000489692 ALKQ9UM73 1620 aa17.41■□□□□ 0.38
GGPS1-207ENST00000489692 FOXD1Q16676 465 aa17.41■□□□□ 0.38
GGPS1-207ENST00000489692 ADAMTS13Q76LX8 1427 aa17.4■□□□□ 0.38
GGPS1-207ENST00000489692 SLAIN2Q9P270 581 aa17.4■□□□□ 0.38
GGPS1-207ENST00000489692 ATF3P18847 181 aa17.39■□□□□ 0.37
GGPS1-207ENST00000489692 FAM135BQ49AJ0 1406 aa17.38■□□□□ 0.37
GGPS1-207ENST00000489692 PIK3R4Q99570 1358 aa17.38■□□□□ 0.37
GGPS1-207ENST00000489692 TRPM2O94759 1503 aa17.37■□□□□ 0.37
GGPS1-207ENST00000489692 NWD1Q149M9 1564 aa17.36■□□□□ 0.37
GGPS1-207ENST00000489692 MYO5BQ9ULV0 1848 aa17.36■□□□□ 0.37
GGPS1-207ENST00000489692 VGFO15240 615 aaPredicted RBP17.36■□□□□ 0.37
GGPS1-207ENST00000489692 CADPS2Q86UW7 1296 aa17.36■□□□□ 0.37
GGPS1-207ENST00000489692 MPHOSPH9Q99550 1183 aa17.35■□□□□ 0.37
GGPS1-207ENST00000489692 C19orf44Q9H6X5 657 aa17.35■□□□□ 0.37
GGPS1-207ENST00000489692 DIP2AQ14689 1571 aa17.35■□□□□ 0.37
GGPS1-207ENST00000489692 SPHKAPQ2M3C7 1700 aa17.35■□□□□ 0.37
GGPS1-207ENST00000489692 SOCS7O14512 581 aa17.34■□□□□ 0.37
GGPS1-207ENST00000489692 MED1Q15648 1581 aaPredicted RBP17.33■□□□□ 0.37
GGPS1-207ENST00000489692 RGL3Q3MIN7 710 aa17.33■□□□□ 0.36
GGPS1-207ENST00000489692 CLTCL1P53675 1640 aa17.32■□□□□ 0.36
GGPS1-207ENST00000489692 PTPRUQ92729 1446 aa17.32■□□□□ 0.36
GGPS1-207ENST00000489692 NCOA3Q9Y6Q9 1424 aa17.32■□□□□ 0.36
GGPS1-207ENST00000489692 METP08581 1390 aa17.32■□□□□ 0.36
GGPS1-207ENST00000489692 RPGRIP1LQ68CZ1 1315 aa17.31■□□□□ 0.36
GGPS1-207ENST00000489692 CCDC144AA2RUR9 1427 aa17.3■□□□□ 0.36
GGPS1-207ENST00000489692 SETD5Q9C0A6 1442 aa17.29■□□□□ 0.36
GGPS1-207ENST00000489692 XIRP1Q702N8 1843 aaKnown RBP17.28■□□□□ 0.36
GGPS1-207ENST00000489692 ACIN1Q9UKV3 1341 aaKnown RBP17.28■□□□□ 0.36
GGPS1-207ENST00000489692 NEXMIFQ5QGS0 1516 aa17.27■□□□□ 0.36
GGPS1-207ENST00000489692 SETBP1Q9Y6X0 1596 aa17.27■□□□□ 0.35
GGPS1-207ENST00000489692 CHD2O14647 1828 aaKnown RBP17.26■□□□□ 0.35
GGPS1-207ENST00000489692 ROBO1Q9Y6N7 1651 aa17.26■□□□□ 0.35
GGPS1-207ENST00000489692 STK26Q9P289 416 aa17.23■□□□□ 0.35
GGPS1-207ENST00000489692 RAB3GAP2Q9H2M9 1393 aa17.23■□□□□ 0.35
GGPS1-207ENST00000489692 JCADQ9P266 1359 aa17.23■□□□□ 0.35
GGPS1-207ENST00000489692 MEX3CQ5U5Q3 659 aaKnown RBP17.22■□□□□ 0.35
GGPS1-207ENST00000489692 BRINP3Q76B58 766 aa17.22■□□□□ 0.35
GGPS1-207ENST00000489692 ADGRF5Q8IZF2 1346 aa17.21■□□□□ 0.35
GGPS1-207ENST00000489692 NRXN3Q9Y4C0 1643 aa17.21■□□□□ 0.35
GGPS1-207ENST00000489692 KIF1BO60333 1816 aa17.21■□□□□ 0.35
GGPS1-207ENST00000489692 ANKRD30BQ9BXX2 1392 aa17.19■□□□□ 0.34
GGPS1-207ENST00000489692 DCCP43146 1447 aa17.19■□□□□ 0.34
GGPS1-207ENST00000489692 ROBO2Q9HCK4 1378 aa17.18■□□□□ 0.34
GGPS1-207ENST00000489692 ADGRL3Q9HAR2 1447 aa17.18■□□□□ 0.34
GGPS1-207ENST00000489692 NUTM2BA6NNL0 878 aaPredicted RBP17.17■□□□□ 0.34
GGPS1-207ENST00000489692 NUTM2EB1AL46 878 aaPredicted RBP17.17■□□□□ 0.34
GGPS1-207ENST00000489692 NUTM2AQ8IVF1 878 aaPredicted RBP17.17■□□□□ 0.34
GGPS1-207ENST00000489692 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.17■□□□□ 0.34
GGPS1-207ENST00000489692 XRN1Q8IZH2 1706 aaKnown RBP17.16■□□□□ 0.34
GGPS1-207ENST00000489692 TMEM132EQ6IEE7 984 aa17.16■□□□□ 0.34
GGPS1-207ENST00000489692 PHLPP1O60346 1717 aa17.16■□□□□ 0.34
GGPS1-207ENST00000489692 MST1RQ04912 1400 aa17.15■□□□□ 0.34
GGPS1-207ENST00000489692 PTCH1Q13635 1447 aa17.15■□□□□ 0.34
GGPS1-207ENST00000489692 SPATA31E1Q6ZUB1 1445 aa17.15■□□□□ 0.34
GGPS1-207ENST00000489692 DDX17Q92841 729 aaKnown RBP17.15■□□□□ 0.34
GGPS1-207ENST00000489692 RGS17Q9UGC6 210 aaPredicted RBP17.15■□□□□ 0.34
GGPS1-207ENST00000489692 CCER1Q8TC90 406 aaPredicted RBP17.14■□□□□ 0.33
GGPS1-207ENST00000489692 SPATA31A6Q5VVP1 1343 aa17.14■□□□□ 0.33
GGPS1-207ENST00000489692 WAPLQ7Z5K2 1190 aa17.12■□□□□ 0.33
GGPS1-207ENST00000489692 LRRC59Q96AG4 307 aaKnown RBP17.12■□□□□ 0.33
GGPS1-207ENST00000489692 ASXL1Q8IXJ9 1541 aa17.11■□□□□ 0.33
GGPS1-207ENST00000489692 NUTM2FA1L443 756 aa17.11■□□□□ 0.33
GGPS1-207ENST00000489692 POTEAQ6S8J7 498 aa17.11■□□□□ 0.33
GGPS1-207ENST00000489692 ORAI2Q96SN7 254 aa17.11■□□□□ 0.33
GGPS1-207ENST00000489692 KDM2AQ9Y2K7 1162 aa17.11■□□□□ 0.33
GGPS1-207ENST00000489692 ESCO1Q5FWF5 840 aa17.1■□□□□ 0.33
GGPS1-207ENST00000489692 C1orf167Q5SNV9 1468 aa17.1■□□□□ 0.33
GGPS1-207ENST00000489692 CFAP70Q5T0N1 1121 aa17.09■□□□□ 0.33
GGPS1-207ENST00000489692 LRPPRCP42704 1394 aaKnown RBP17.09■□□□□ 0.33
GGPS1-207ENST00000489692 COL16A1Q07092 1604 aaPredicted RBP17.09■□□□□ 0.33
GGPS1-207ENST00000489692 AHDC1Q5TGY3 1603 aaPredicted RBP17.09■□□□□ 0.33
GGPS1-207ENST00000489692 PIK3C2GO75747 1445 aa17.07■□□□□ 0.32
GGPS1-207ENST00000489692 SAFB2Q14151 953 aaKnown RBP eCLIP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms