RNA–Protein interactions for RNA: ENST00000489678.1

ABCD4-214, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 3,008 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-214ENST00000489678 ERVK-7P63135 1459 aa14.34□□□□□ -0.11
ABCD4-214ENST00000489678 ERICH6Q7L0X2 663 aa14.34□□□□□ -0.11
ABCD4-214ENST00000489678 SLC52A1Q9NWF4 448 aa14.34□□□□□ -0.11
ABCD4-214ENST00000489678 DEPDC5O75140 1603 aa14.33□□□□□ -0.12
ABCD4-214ENST00000489678 RNF17Q9BXT8 1623 aaKnown RBP14.33□□□□□ -0.12
ABCD4-214ENST00000489678 TET3O43151 1660 aa14.33□□□□□ -0.12
ABCD4-214ENST00000489678 SPATA31E1Q6ZUB1 1445 aa14.32□□□□□ -0.12
ABCD4-214ENST00000489678 USP47Q96K76 1375 aa14.32□□□□□ -0.12
ABCD4-214ENST00000489678 TMC1Q8TDI8 760 aa14.31□□□□□ -0.12
ABCD4-214ENST00000489678 MYO5BQ9ULV0 1848 aa14.31□□□□□ -0.12
ABCD4-214ENST00000489678 PTPRTO14522 1441 aa14.3□□□□□ -0.12
ABCD4-214ENST00000489678 VWDEQ8N2E2 1590 aa14.3□□□□□ -0.12
ABCD4-214ENST00000489678 MROH2AA6NES4 1674 aa14.3□□□□□ -0.12
ABCD4-214ENST00000489678 SPHKAPQ2M3C7 1700 aa14.3□□□□□ -0.12
ABCD4-214ENST00000489678 PRAM1Q96QH2 718 aa14.3□□□□□ -0.12
ABCD4-214ENST00000489678 POGKQ9P215 609 aa14.3□□□□□ -0.12
ABCD4-214ENST00000489678 C14orf37Q86TY3 774 aa14.29□□□□□ -0.12
ABCD4-214ENST00000489678 VGFO15240 615 aaPredicted RBP14.29□□□□□ -0.12
ABCD4-214ENST00000489678 EIF2AK4Q9P2K8 1649 aaKnown RBP14.29□□□□□ -0.12
ABCD4-214ENST00000489678 CABP2Q9NPB3 220 aa14.28□□□□□ -0.12
ABCD4-214ENST00000489678 FER1L4A9Z1Z3 1794 aa14.28□□□□□ -0.12
ABCD4-214ENST00000489678 PTPRMP28827 1452 aa14.28□□□□□ -0.12
ABCD4-214ENST00000489678 WASHC2AQ641Q2 1341 aa14.28□□□□□ -0.12
ABCD4-214ENST00000489678 EID1Q9Y6B2 187 aa14.28□□□□□ -0.12
ABCD4-214ENST00000489678 TRPM2O94759 1503 aa14.28□□□□□ -0.12
ABCD4-214ENST00000489678 TNNT2P45379 298 aaPredicted RBP14.27□□□□□ -0.12
ABCD4-214ENST00000489678 PRAG1Q86YV5 1406 aa14.27□□□□□ -0.13
ABCD4-214ENST00000489678 RIMS2Q9UQ26 1411 aa14.27□□□□□ -0.13
ABCD4-214ENST00000489678 SRCAPQ6ZRS2 3230 aa14.27□□□□□ -0.13
ABCD4-214ENST00000489678 METP08581 1390 aa14.27□□□□□ -0.13
ABCD4-214ENST00000489678 CNTLNQ9NXG0 1405 aa14.26□□□□□ -0.13
ABCD4-214ENST00000489678 PIK3C2BO00750 1634 aa14.26□□□□□ -0.13
ABCD4-214ENST00000489678 PREX1Q8TCU6 1659 aa14.26□□□□□ -0.13
ABCD4-214ENST00000489678 AGLP35573 1532 aa14.26□□□□□ -0.13
ABCD4-214ENST00000489678 PLEKHH1Q9ULM0 1364 aa14.26□□□□□ -0.13
ABCD4-214ENST00000489678 SOX12O15370 315 aa14.25□□□□□ -0.13
ABCD4-214ENST00000489678 THEMISQ8N1K5 641 aaPredicted RBP14.25□□□□□ -0.13
ABCD4-214ENST00000489678 ANP32CO43423 234 aa14.24□□□□□ -0.13
ABCD4-214ENST00000489678 AEBP2Q6ZN18 517 aaPredicted RBP14.24□□□□□ -0.13
ABCD4-214ENST00000489678 A2ML1A8K2U0 1454 aa14.24□□□□□ -0.13
ABCD4-214ENST00000489678 C3P01024 1663 aa14.24□□□□□ -0.13
ABCD4-214ENST00000489678 BCORL1Q5H9F3 1711 aa14.24□□□□□ -0.13
ABCD4-214ENST00000489678 SRPK2P78362 688 aaKnown RBP14.24□□□□□ -0.13
ABCD4-214ENST00000489678 CCER2I3L3R5 266 aa14.23□□□□□ -0.13
ABCD4-214ENST00000489678 KCNA6P17658 529 aa14.23□□□□□ -0.13
ABCD4-214ENST00000489678 XPCQ01831 940 aaPredicted RBP14.23□□□□□ -0.13
ABCD4-214ENST00000489678 KIF7Q2M1P5 1343 aa14.23□□□□□ -0.13
ABCD4-214ENST00000489678 UHRF1BP1Q6BDS2 1440 aa14.23□□□□□ -0.13
ABCD4-214ENST00000489678 TMEM2Q9UHN6 1383 aa14.22□□□□□ -0.13
ABCD4-214ENST00000489678 CC2D1BQ5T0F9 858 aaKnown RBP14.22□□□□□ -0.13
ABCD4-214ENST00000489678 ANKLE2Q86XL3 938 aa14.22□□□□□ -0.13
ABCD4-214ENST00000489678 DISP3Q9P2K9 1392 aa14.21□□□□□ -0.13
ABCD4-214ENST00000489678 FBLN1P23142 703 aa14.21□□□□□ -0.13
ABCD4-214ENST00000489678 AMOTL2Q9Y2J4 779 aa14.21□□□□□ -0.13
ABCD4-214ENST00000489678 PPP6R1Q9UPN7 881 aa14.21□□□□□ -0.13
ABCD4-214ENST00000489678 LMTK2Q8IWU2 1503 aa14.2□□□□□ -0.14
ABCD4-214ENST00000489678 C14orf93Q9H972 538 aaKnown RBP14.2□□□□□ -0.14
ABCD4-214ENST00000489678 SLC12A5Q9H2X9 1139 aa14.2□□□□□ -0.14
ABCD4-214ENST00000489678 PMFBP1Q8TBY8 1022 aa14.2□□□□□ -0.14
ABCD4-214ENST00000489678 DDX17Q92841 729 aaKnown RBP14.2□□□□□ -0.14
ABCD4-214ENST00000489678 ARHGAP31Q2M1Z3 1444 aa14.19□□□□□ -0.14
ABCD4-214ENST00000489678 SUPT16HQ9Y5B9 1047 aaKnown RBP14.19□□□□□ -0.14
ABCD4-214ENST00000489678 NUTM2GQ5VZR2 741 aa14.18□□□□□ -0.14
ABCD4-214ENST00000489678 KIF1BO60333 1816 aa14.18□□□□□ -0.14
ABCD4-214ENST00000489678 ZNF335Q9H4Z2 1342 aaPredicted RBP14.17□□□□□ -0.14
ABCD4-214ENST00000489678 TESK2Q96S53 571 aa14.17□□□□□ -0.14
ABCD4-214ENST00000489678 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.15□□□□□ -0.14
ABCD4-214ENST00000489678 ADGRB3O60242 1522 aa14.15□□□□□ -0.14
ABCD4-214ENST00000489678 TMEM131LA2VDJ0 1609 aa14.15□□□□□ -0.14
ABCD4-214ENST00000489678 CENPJQ9HC77 1338 aaPredicted RBP14.15□□□□□ -0.14
ABCD4-214ENST00000489678 CCDC184Q52MB2 194 aa14.15□□□□□ -0.14
ABCD4-214ENST00000489678 LMOD2Q6P5Q4 547 aa14.15□□□□□ -0.14
ABCD4-214ENST00000489678 REREQ9P2R6 1566 aa14.14□□□□□ -0.15
ABCD4-214ENST00000489678 NEXMIFQ5QGS0 1516 aa14.14□□□□□ -0.15
ABCD4-214ENST00000489678 PANK3Q9H999 370 aa14.14□□□□□ -0.15
ABCD4-214ENST00000489678 CCDC7Q96M83 1385 aa14.14□□□□□ -0.15
ABCD4-214ENST00000489678 SPATA31D1Q6ZQQ2 1576 aa14.14□□□□□ -0.15
ABCD4-214ENST00000489678 PIK3C2GO75747 1445 aa14.13□□□□□ -0.15
ABCD4-214ENST00000489678 ZBTB7CA1YPR0 619 aa14.12□□□□□ -0.15
ABCD4-214ENST00000489678 ROBO2Q9HCK4 1378 aa14.12□□□□□ -0.15
ABCD4-214ENST00000489678 PROSER2Q86WR7 435 aaPredicted RBP14.11□□□□□ -0.15
ABCD4-214ENST00000489678 CDK19Q9BWU1 502 aa14.11□□□□□ -0.15
ABCD4-214ENST00000489678 SALL2Q9Y467 1007 aaPredicted RBP14.11□□□□□ -0.15
ABCD4-214ENST00000489678 ADAMTSL3P82987 1691 aa14.11□□□□□ -0.15
ABCD4-214ENST00000489678 TMF1P82094 1093 aa14.11□□□□□ -0.15
ABCD4-214ENST00000489678 CABP1Q9NZU7 370 aa14.11□□□□□ -0.15
ABCD4-214ENST00000489678 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.1□□□□□ -0.15
ABCD4-214ENST00000489678 ZRANB1Q9UGI0 708 aa14.1□□□□□ -0.15
ABCD4-214ENST00000489678 HDGFP51858 240 aaKnown RBP14.09□□□□□ -0.15
ABCD4-214ENST00000489678 RALGAPBQ86X10 1494 aa14.09□□□□□ -0.15
ABCD4-214ENST00000489678 ZC3H13Q5T200 1668 aaKnown RBP14.09□□□□□ -0.15
ABCD4-214ENST00000489678 RPGRIP1LQ68CZ1 1315 aa14.09□□□□□ -0.15
ABCD4-214ENST00000489678 ZFYVE9O95405 1425 aa14.09□□□□□ -0.15
ABCD4-214ENST00000489678 PPM1GO15355 546 aaPredicted RBP14.09□□□□□ -0.15
ABCD4-214ENST00000489678 PTPRUQ92729 1446 aa14.09□□□□□ -0.15
ABCD4-214ENST00000489678 CEP170BQ9Y4F5 1589 aaPredicted RBP14.08□□□□□ -0.15
ABCD4-214ENST00000489678 YTHDC2Q9H6S0 1430 aaKnown RBP14.08□□□□□ -0.16
ABCD4-214ENST00000489678 GOLGB1Q14789 3259 aaKnown RBP14.08□□□□□ -0.16
ABCD4-214ENST00000489678 PAK3O75914 559 aaPredicted RBP14.08□□□□□ -0.16
ABCD4-214ENST00000489678 MYO3AQ8NEV4 1616 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms