RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 ATAD2Q6PL18 1390 aa24.53■■□□□ 1.52
UFD1-209ENST00000489406 C14orf37Q86TY3 774 aa24.51■■□□□ 1.51
UFD1-209ENST00000489406 EFCAB6Q5THR3 1501 aa24.51■■□□□ 1.51
UFD1-209ENST00000489406 C8orf37Q96NL8 207 aa24.5■■□□□ 1.51
UFD1-209ENST00000489406 DIP2AQ14689 1571 aa24.48■■□□□ 1.51
UFD1-209ENST00000489406 EIF2AK4Q9P2K8 1649 aaKnown RBP24.47■■□□□ 1.51
UFD1-209ENST00000489406 EHBP1L1Q8N3D4 1523 aa24.47■■□□□ 1.51
UFD1-209ENST00000489406 ARHGAP31Q2M1Z3 1444 aa24.47■■□□□ 1.51
UFD1-209ENST00000489406 CEP162Q5TB80 1403 aa24.47■■□□□ 1.51
UFD1-209ENST00000489406 IDI1Q13907 227 aa24.46■■□□□ 1.51
UFD1-209ENST00000489406 ARHGEF5Q12774 1597 aa24.46■■□□□ 1.51
UFD1-209ENST00000489406 CADPS2Q86UW7 1296 aa24.45■■□□□ 1.5
UFD1-209ENST00000489406 NGLY1Q96IV0 654 aa24.45■■□□□ 1.5
UFD1-209ENST00000489406 ATF3P18847 181 aa24.44■■□□□ 1.5
UFD1-209ENST00000489406 BRINP3Q76B58 766 aa24.42■■□□□ 1.5
UFD1-209ENST00000489406 CHD2O14647 1828 aaKnown RBP24.41■■□□□ 1.5
UFD1-209ENST00000489406 C19orf44Q9H6X5 657 aa24.4■■□□□ 1.5
UFD1-209ENST00000489406 NCOA3Q9Y6Q9 1424 aa24.4■■□□□ 1.5
UFD1-209ENST00000489406 MAST1Q9Y2H9 1570 aa24.39■■□□□ 1.5
UFD1-209ENST00000489406 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.38■■□□□ 1.49
UFD1-209ENST00000489406 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.37■■□□□ 1.496e-6■□□□□ 11
UFD1-209ENST00000489406 SETD5Q9C0A6 1442 aa24.35■■□□□ 1.49
UFD1-209ENST00000489406 ADAMTS2O95450 1211 aa24.33■■□□□ 1.49
UFD1-209ENST00000489406 CCDC125Q86Z20 511 aa24.33■■□□□ 1.49
UFD1-209ENST00000489406 LRRC59Q96AG4 307 aaKnown RBP24.33■■□□□ 1.49
UFD1-209ENST00000489406 ADGRB3O60242 1522 aa24.3■■□□□ 1.48
UFD1-209ENST00000489406 PLEKHG1Q9ULL1 1385 aa24.3■■□□□ 1.48
UFD1-209ENST00000489406 EP400Q96L91 3159 aa24.3■■□□□ 1.48
UFD1-209ENST00000489406 DUOX2Q9NRD8 1548 aa24.3■■□□□ 1.48
UFD1-209ENST00000489406 PPP1R15AO75807 674 aaPredicted RBP24.29■■□□□ 1.48
UFD1-209ENST00000489406 USP21Q9UK80 565 aa24.28■■□□□ 1.48
UFD1-209ENST00000489406 TBX22Q9Y458 520 aa24.28■■□□□ 1.48
UFD1-209ENST00000489406 ASXL1Q8IXJ9 1541 aa24.28■■□□□ 1.48
UFD1-209ENST00000489406 PNPLA6Q8IY17 1366 aa24.28■■□□□ 1.48
UFD1-209ENST00000489406 TRPC5Q9UL62 973 aaPredicted RBP24.26■■□□□ 1.47
UFD1-209ENST00000489406 DDX17Q92841 729 aaKnown RBP24.25■■□□□ 1.47
UFD1-209ENST00000489406 KANK1Q14678 1352 aa24.24■■□□□ 1.47
UFD1-209ENST00000489406 ZFYVE9O95405 1425 aa24.23■■□□□ 1.47
UFD1-209ENST00000489406 LRP5O75197 1615 aa24.22■■□□□ 1.47
UFD1-209ENST00000489406 NHSL1Q5SYE7 1610 aa24.22■■□□□ 1.47
UFD1-209ENST00000489406 RIMS2Q9UQ26 1411 aa24.21■■□□□ 1.47
UFD1-209ENST00000489406 SLC52A1Q9NWF4 448 aa24.21■■□□□ 1.47
UFD1-209ENST00000489406 NOS1P29475 1434 aa24.2■■□□□ 1.46
UFD1-209ENST00000489406 HDGFP51858 240 aaKnown RBP24.2■■□□□ 1.46
UFD1-209ENST00000489406 KIF15Q9NS87 1388 aa24.19■■□□□ 1.46
UFD1-209ENST00000489406 RRP7BPQ9NSQ0 103 aa24.19■■□□□ 1.46
UFD1-209ENST00000489406 ERBINQ96RT1 1412 aa24.18■■□□□ 1.46
UFD1-209ENST00000489406 DEFB132Q7Z7B7 95 aa24.17■■□□□ 1.46
UFD1-209ENST00000489406 ATRNO75882 1429 aa24.17■■□□□ 1.46
UFD1-209ENST00000489406 FNBP4Q8N3X1 1017 aaPredicted RBP24.16■■□□□ 1.46
UFD1-209ENST00000489406 MST1RQ04912 1400 aa24.16■■□□□ 1.46
UFD1-209ENST00000489406 ADAMTS13Q76LX8 1427 aa24.16■■□□□ 1.46
UFD1-209ENST00000489406 AMOTL2Q9Y2J4 779 aa24.15■■□□□ 1.46
UFD1-209ENST00000489406 DCCP43146 1447 aa24.15■■□□□ 1.46
UFD1-209ENST00000489406 LMTK2Q8IWU2 1503 aa24.14■■□□□ 1.45
UFD1-209ENST00000489406 MYO5BQ9ULV0 1848 aa24.13■■□□□ 1.45
UFD1-209ENST00000489406 PIK3R4Q99570 1358 aa24.13■■□□□ 1.45
UFD1-209ENST00000489406 BLMP54132 1417 aaPredicted RBP24.12■■□□□ 1.45
UFD1-209ENST00000489406 PSDA5PKW4 1024 aaPredicted RBP24.1■■□□□ 1.45
UFD1-209ENST00000489406 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.09■■□□□ 1.45
UFD1-209ENST00000489406 PTPRUQ92729 1446 aa24.09■■□□□ 1.45
UFD1-209ENST00000489406 MYOM3Q5VTT5 1437 aa24.07■■□□□ 1.44
UFD1-209ENST00000489406 GCC2Q8IWJ2 1684 aa24.06■■□□□ 1.44
UFD1-209ENST00000489406 CHGAP10645 457 aaKnown RBP24.06■■□□□ 1.44
UFD1-209ENST00000489406 SF3B2Q13435 895 aaKnown RBP24.06■■□□□ 1.44
UFD1-209ENST00000489406 PTCH1Q13635 1447 aa24.06■■□□□ 1.44
UFD1-209ENST00000489406 HRCP23327 699 aa24.05■■□□□ 1.44
UFD1-209ENST00000489406 TMEM131LA2VDJ0 1609 aa24.04■■□□□ 1.44
UFD1-209ENST00000489406 GJD4Q96KN9 370 aaPredicted RBP24.04■■□□□ 1.44
UFD1-209ENST00000489406 YY1P25490 414 aa24.03■■□□□ 1.44
UFD1-209ENST00000489406 TRPM2O94759 1503 aa24.03■■□□□ 1.44
UFD1-209ENST00000489406 BCL9LQ86UU0 1499 aa24.01■■□□□ 1.43
UFD1-209ENST00000489406 ABCC5O15440 1437 aa23.98■■□□□ 1.43
UFD1-209ENST00000489406 SOS2Q07890 1332 aaPredicted RBP23.97■■□□□ 1.43
UFD1-209ENST00000489406 RPRD2Q5VT52 1461 aaKnown RBP23.94■■□□□ 1.42
UFD1-209ENST00000489406 XRN1Q8IZH2 1706 aaKnown RBP23.93■■□□□ 1.42
UFD1-209ENST00000489406 ADGRL3Q9HAR2 1447 aa23.93■■□□□ 1.42
UFD1-209ENST00000489406 CROCC2H7BZ55 1655 aa23.92■■□□□ 1.42
UFD1-209ENST00000489406 ORAI2Q96SN7 254 aa23.92■■□□□ 1.42
UFD1-209ENST00000489406 C1orf167Q5SNV9 1468 aa23.92■■□□□ 1.42
UFD1-209ENST00000489406 CHIC2Q9UKJ5 165 aa23.91■■□□□ 1.42
UFD1-209ENST00000489406 UNC13BO14795 1591 aa23.91■■□□□ 1.42
UFD1-209ENST00000489406 RALGAPBQ86X10 1494 aa23.89■■□□□ 1.42
UFD1-209ENST00000489406 LAMC1P11047 1609 aa23.89■■□□□ 1.42
UFD1-209ENST00000489406 BRWD3Q6RI45 1802 aa23.89■■□□□ 1.41
UFD1-209ENST00000489406 GLI3P10071 1580 aa23.88■■□□□ 1.41
UFD1-209ENST00000489406 IFFO2Q5TF58 517 aa23.88■■□□□ 1.41
UFD1-209ENST00000489406 COL22A1Q8NFW1 1626 aaPredicted RBP23.88■■□□□ 1.41
UFD1-209ENST00000489406 MYOM2P54296 1465 aa23.87■■□□□ 1.41
UFD1-209ENST00000489406 BAG6P46379 1132 aa23.86■■□□□ 1.41
UFD1-209ENST00000489406 SEPT12Q8IYM1 358 aa23.86■■□□□ 1.41
UFD1-209ENST00000489406 NALCNQ8IZF0 1738 aa23.86■■□□□ 1.41
UFD1-209ENST00000489406 ANKRD30AQ9BXX3 1397 aa23.86■■□□□ 1.41
UFD1-209ENST00000489406 DAPK1P53355 1430 aa23.85■■□□□ 1.41
UFD1-209ENST00000489406 R3HDM1Q15032 1099 aaKnown RBP23.85■■□□□ 1.41
UFD1-209ENST00000489406 UNC5CLQ8IV45 518 aa23.85■■□□□ 1.41
UFD1-209ENST00000489406 KANK4Q5T7N3 995 aaPredicted RBP23.84■■□□□ 1.41
UFD1-209ENST00000489406 METP08581 1390 aa23.83■■□□□ 1.41
UFD1-209ENST00000489406 SPHKAPQ2M3C7 1700 aa23.82■■□□□ 1.4
UFD1-209ENST00000489406 MARF1Q9Y4F3 1742 aaKnown RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms