RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 PPEF1O14829 653 aaPredicted RBP10.99□□□□□ -0.65
CBWD1-216ENST00000489272 NKX1-1Q15270 411 aaPredicted RBP10.99□□□□□ -0.65
CBWD1-216ENST00000489272 LMOD2Q6P5Q4 547 aa10.99□□□□□ -0.65
CBWD1-216ENST00000489272 LORP23490 312 aaPredicted RBP10.98□□□□□ -0.65
CBWD1-216ENST00000489272 CTC1Q2NKJ3 1217 aa10.98□□□□□ -0.65
CBWD1-216ENST00000489272 MAP3K7O43318 606 aa10.97□□□□□ -0.65
CBWD1-216ENST00000489272 DDX12PQ92771 950 aa10.97□□□□□ -0.65
CBWD1-216ENST00000489272 PKD2L1Q9P0L9 805 aa10.97□□□□□ -0.65
CBWD1-216ENST00000489272 DNAJC5Q9H3Z4 198 aa10.96□□□□□ -0.65
CBWD1-216ENST00000489272 SMCPP49901 116 aaPredicted RBP10.95□□□□□ -0.66
CBWD1-216ENST00000489272 SLF2Q8IX21 1173 aa10.94□□□□□ -0.66
CBWD1-216ENST00000489272 PCDHB3Q9Y5E6 796 aa10.94□□□□□ -0.66
CBWD1-216ENST00000489272 S1PR4O95977 384 aa10.93□□□□□ -0.66
CBWD1-216ENST00000489272 TLL1O43897 1013 aa10.92□□□□□ -0.66
CBWD1-216ENST00000489272 BLOC1S3Q6QNY0 202 aa10.92□□□□□ -0.66
CBWD1-216ENST00000489272 CERKQ8TCT0 537 aa10.92□□□□□ -0.66
CBWD1-216ENST00000489272 PRR14Q9BWN1 585 aa10.92□□□□□ -0.66
CBWD1-216ENST00000489272 FOXC1Q12948 553 aa10.91□□□□□ -0.66
CBWD1-216ENST00000489272 NBR1Q14596 966 aa10.91□□□□□ -0.66
CBWD1-216ENST00000489272 NUDT18Q6ZVK8 323 aa10.91□□□□□ -0.66
CBWD1-216ENST00000489272 ZSCAN1Q8NBB4 408 aa10.91□□□□□ -0.66
CBWD1-216ENST00000489272 TOR4AQ9NXH8 423 aa10.9□□□□□ -0.66
CBWD1-216ENST00000489272 DPYSL4O14531 572 aa10.89□□□□□ -0.67
CBWD1-216ENST00000489272 SNRPBP14678 240 aaKnown RBP10.89□□□□□ -0.67
CBWD1-216ENST00000489272 PLA2G2CQ5R387 149 aa10.89□□□□□ -0.67
CBWD1-216ENST00000489272 SWT1Q5T5J6 900 aaKnown RBP10.89□□□□□ -0.67
CBWD1-216ENST00000489272 CHGAP10645 457 aaKnown RBP10.87□□□□□ -0.67
CBWD1-216ENST00000489272 CAMK2BQ13554 666 aa10.85□□□□□ -0.67
CBWD1-216ENST00000489272 TRIM47Q96LD4 638 aa10.84□□□□□ -0.67
CBWD1-216ENST00000489272 SLC4A3P48751 1232 aa10.83□□□□□ -0.68
CBWD1-216ENST00000489272 ATP13A2Q9NQ11 1180 aa10.83□□□□□ -0.68
CBWD1-216ENST00000489272 CYP4X1Q8N118 509 aa10.82□□□□□ -0.68
CBWD1-216ENST00000489272 SLC16A10Q8TF71 515 aa10.81□□□□□ -0.68
CBWD1-216ENST00000489272 SENP2Q9HC62 589 aa10.81□□□□□ -0.68
CBWD1-216ENST00000489272 RBM27Q9P2N5 1060 aaKnown RBP10.81□□□□□ -0.68
CBWD1-216ENST00000489272 GMPRP36959 345 aa10.8□□□□□ -0.68
CBWD1-216ENST00000489272 ADH1BP00325 375 aa10.79□□□□□ -0.68
CBWD1-216ENST00000489272 SLC6A16Q9GZN6 736 aa10.76□□□□□ -0.69
CBWD1-216ENST00000489272 RPIAP49247 311 aa10.74□□□□□ -0.69
CBWD1-216ENST00000489272 PRIM1P49642 420 aaKnown RBP10.74□□□□□ -0.69
CBWD1-216ENST00000489272 KCTD17Q8N5Z5 321 aa10.74□□□□□ -0.69
CBWD1-216ENST00000489272 KIFC2Q96AC6 838 aa10.73□□□□□ -0.69
CBWD1-216ENST00000489272 TTC13Q8NBP0 860 aa10.71□□□□□ -0.69
CBWD1-216ENST00000489272 IRF7Q92985 503 aa10.71□□□□□ -0.69
CBWD1-216ENST00000489272 NXF1Q9UBU9 619 aaKnown RBP10.71□□□□□ -0.69
CBWD1-216ENST00000489272 ACTN4O43707 911 aaKnown RBP10.7□□□□□ -0.7
CBWD1-216ENST00000489272 GTPBP6O43824 516 aaPredicted RBP10.7□□□□□ -0.7
CBWD1-216ENST00000489272 CD2BP2O95400 341 aaKnown RBP10.69□□□□□ -0.7
CBWD1-216ENST00000489272 KCNMA1Q12791 1236 aa10.69□□□□□ -0.7
CBWD1-216ENST00000489272 PDIA6Q15084 440 aa10.69□□□□□ -0.7
CBWD1-216ENST00000489272 TTC24A2A3L6 582 aaPredicted RBP10.68□□□□□ -0.7
CBWD1-216ENST00000489272 GSK3AP49840 483 aa10.68□□□□□ -0.7
CBWD1-216ENST00000489272 NPAS3Q8IXF0 933 aa10.68□□□□□ -0.7
CBWD1-216ENST00000489272 CADPS2Q86UW7 1296 aa10.66□□□□□ -0.7
CBWD1-216ENST00000489272 CDHR5Q9HBB8 845 aa10.66□□□□□ -0.7
CBWD1-216ENST00000489272 NR1I2O75469 434 aa10.65□□□□□ -0.7
CBWD1-216ENST00000489272 SMPD1P17405 629 aa10.65□□□□□ -0.7
CBWD1-216ENST00000489272 KMT5BQ4FZB7 885 aa10.65□□□□□ -0.7
CBWD1-216ENST00000489272 EYA1Q99502 592 aa10.65□□□□□ -0.7
CBWD1-216ENST00000489272 SPDYE16A6NNV3 312 aaPredicted RBP10.62□□□□□ -0.71
CBWD1-216ENST00000489272 XP32Q5T750 250 aa10.62□□□□□ -0.71
CBWD1-216ENST00000489272 PADI6Q6TGC4 694 aa10.62□□□□□ -0.71
CBWD1-216ENST00000489272 KRTAP4-8Q9BYQ9 185 aa10.62□□□□□ -0.71
CBWD1-216ENST00000489272 VEGFBP49765 207 aa10.6□□□□□ -0.71
CBWD1-216ENST00000489272 H3BM21 787 aa10.59□□□□□ -0.71
CBWD1-216ENST00000489272 SNIP1Q8TAD8 396 aaKnown RBP10.59□□□□□ -0.71
CBWD1-216ENST00000489272 ERBB4Q15303 1308 aa10.58□□□□□ -0.71
CBWD1-216ENST00000489272 CFHP08603 1231 aa10.57□□□□□ -0.72
CBWD1-216ENST00000489272 TMEM151AQ8N4L1 468 aa10.57□□□□□ -0.72
CBWD1-216ENST00000489272 SCUBE3Q8IX30 993 aa10.56□□□□□ -0.72
CBWD1-216ENST00000489272 GRXCR2A6NFK2 248 aa10.55□□□□□ -0.72
CBWD1-216ENST00000489272 DCAF8L2P0C7V8 631 aa10.55□□□□□ -0.72
CBWD1-216ENST00000489272 SPSB2Q99619 263 aa10.55□□□□□ -0.72
CBWD1-216ENST00000489272 FCF1Q9Y324 198 aaKnown RBP10.55□□□□□ -0.72
CBWD1-216ENST00000489272 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.53□□□□□ -0.72
CBWD1-216ENST00000489272 WNT7AO00755 349 aa10.53□□□□□ -0.72
CBWD1-216ENST00000489272 NPDC1Q9NQX5 325 aaPredicted RBP10.53□□□□□ -0.72
CBWD1-216ENST00000489272 J3QL48 77 aa10.52□□□□□ -0.73
CBWD1-216ENST00000489272 OSBPP22059 807 aa10.52□□□□□ -0.73
CBWD1-216ENST00000489272 DNAJB2P25686 324 aa10.52□□□□□ -0.73
CBWD1-216ENST00000489272 HPS1Q92902 700 aa10.52□□□□□ -0.73
CBWD1-216ENST00000489272 GDF11O95390 407 aa10.51□□□□□ -0.73
CBWD1-216ENST00000489272 TMEM134Q9H6X4 195 aa10.5□□□□□ -0.73
CBWD1-216ENST00000489272 RASSF7Q02833 373 aa10.49□□□□□ -0.73
CBWD1-216ENST00000489272 KRTAP9-2Q9BYQ4 174 aa10.47□□□□□ -0.73
CBWD1-216ENST00000489272 MRGPRX2Q96LB1 330 aa10.45□□□□□ -0.74
CBWD1-216ENST00000489272 KRTAP9-6A0A140TA67 174 aa10.44□□□□□ -0.74
CBWD1-216ENST00000489272 ZBTB24O43167 697 aaPredicted RBP10.44□□□□□ -0.74
CBWD1-216ENST00000489272 SLC10A3P09131 477 aa10.44□□□□□ -0.74
CBWD1-216ENST00000489272 AMER1Q5JTC6 1135 aaPredicted RBP10.44□□□□□ -0.74
CBWD1-216ENST00000489272 PUS10Q3MIT2 529 aaKnown RBP10.41□□□□□ -0.74
CBWD1-216ENST00000489272 VSIG8P0DPA2 414 aa10.39□□□□□ -0.75
CBWD1-216ENST00000489272 RNF225M0QZC1 329 aaPredicted RBP10.38□□□□□ -0.75
CBWD1-216ENST00000489272 TRIM46Q7Z4K8 759 aa10.38□□□□□ -0.75
CBWD1-216ENST00000489272 RBM46Q8TBY0 533 aaKnown RBP10.38□□□□□ -0.75
CBWD1-216ENST00000489272 IGHA1P01876 353 aa10.37□□□□□ -0.75
CBWD1-216ENST00000489272 FAM160A2Q8N612 972 aaPredicted RBP10.37□□□□□ -0.75
CBWD1-216ENST00000489272 THAP11Q96EK4 314 aa10.37□□□□□ -0.75
CBWD1-216ENST00000489272 REPIN1Q9BWE0 567 aaKnown RBP10.37□□□□□ -0.75
CBWD1-216ENST00000489272 TRIM32Q13049 653 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms