RNA–Protein interactions for RNA: ENST00000488497.7

U2SURP-211, Transcript of U2 snRNP associated SURP domain containing, humanhuman

TSL 1 (best)

Gene U2SURP, Length 3,557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-211ENST00000488497 ADGRB3O60242 1522 aa9.9□□□□□ -0.83
U2SURP-211ENST00000488497 MROH1Q8NDA8 1641 aa9.89□□□□□ -0.83
U2SURP-211ENST00000488497 ALKQ9UM73 1620 aa9.89□□□□□ -0.83
U2SURP-211ENST00000488497 CHGAP10645 457 aaKnown RBP9.89□□□□□ -0.83
U2SURP-211ENST00000488497 PIK3C2BO00750 1634 aa9.89□□□□□ -0.83
U2SURP-211ENST00000488497 C19orf44Q9H6X5 657 aa9.89□□□□□ -0.83
U2SURP-211ENST00000488497 PTPN23Q9H3S7 1636 aa9.89□□□□□ -0.83
U2SURP-211ENST00000488497 NOS1P29475 1434 aa9.88□□□□□ -0.83
U2SURP-211ENST00000488497 KANK4Q5T7N3 995 aaPredicted RBP9.88□□□□□ -0.83
U2SURP-211ENST00000488497 CHIC2Q9UKJ5 165 aa9.88□□□□□ -0.83
U2SURP-211ENST00000488497 POTEAQ6S8J7 498 aa9.88□□□□□ -0.83
U2SURP-211ENST00000488497 RGS17Q9UGC6 210 aaPredicted RBP9.88□□□□□ -0.83
U2SURP-211ENST00000488497 STRCP1A6NGW2 1772 aa9.87□□□□□ -0.83
U2SURP-211ENST00000488497 FAM50AQ14320 339 aaKnown RBP9.87□□□□□ -0.83
U2SURP-211ENST00000488497 RIMS2Q9UQ26 1411 aa9.87□□□□□ -0.83
U2SURP-211ENST00000488497 CFAP65Q6ZU64 1925 aaKnown RBP9.87□□□□□ -0.83
U2SURP-211ENST00000488497 RXRBP28702 533 aa9.87□□□□□ -0.83
U2SURP-211ENST00000488497 NWD1Q149M9 1564 aa9.87□□□□□ -0.83
U2SURP-211ENST00000488497 ROBO1Q9Y6N7 1651 aa9.86□□□□□ -0.83
U2SURP-211ENST00000488497 ANKRD50Q9ULJ7 1429 aa9.86□□□□□ -0.83
U2SURP-211ENST00000488497 CROCC2H7BZ55 1655 aa9.85□□□□□ -0.83
U2SURP-211ENST00000488497 DIP2AQ14689 1571 aa9.85□□□□□ -0.83
U2SURP-211ENST00000488497 PHLPP1O60346 1717 aa9.84□□□□□ -0.83
U2SURP-211ENST00000488497 ADGRL2O95490 1459 aa9.84□□□□□ -0.83
U2SURP-211ENST00000488497 NGLY1Q96IV0 654 aa9.84□□□□□ -0.83
U2SURP-211ENST00000488497 TET3O43151 1660 aa9.84□□□□□ -0.83
U2SURP-211ENST00000488497 LRRC59Q96AG4 307 aaKnown RBP9.83□□□□□ -0.84
U2SURP-211ENST00000488497 DCCP43146 1447 aa9.83□□□□□ -0.84
U2SURP-211ENST00000488497 TRIM52Q96A61 297 aa9.82□□□□□ -0.84
U2SURP-211ENST00000488497 TRPM2O94759 1503 aa9.82□□□□□ -0.84
U2SURP-211ENST00000488497 CDK12Q9NYV4 1490 aaPredicted RBP9.82□□□□□ -0.84
U2SURP-211ENST00000488497 ZFYVE9O95405 1425 aa9.8□□□□□ -0.84
U2SURP-211ENST00000488497 ZNF326Q5BKZ1 582 aaKnown RBP9.8□□□□□ -0.84
U2SURP-211ENST00000488497 NUTM2BA6NNL0 878 aaPredicted RBP9.8□□□□□ -0.84
U2SURP-211ENST00000488497 NUTM2EB1AL46 878 aaPredicted RBP9.8□□□□□ -0.84
U2SURP-211ENST00000488497 NUTM2AQ8IVF1 878 aaPredicted RBP9.8□□□□□ -0.84
U2SURP-211ENST00000488497 RBM33Q96EV2 1170 aaKnown RBP9.8□□□□□ -0.84
U2SURP-211ENST00000488497 AMOTL2Q9Y2J4 779 aa9.8□□□□□ -0.84
U2SURP-211ENST00000488497 XIRP1Q702N8 1843 aaKnown RBP9.79□□□□□ -0.84
U2SURP-211ENST00000488497 UPF1Q92900 1129 aaKnown RBP eCLIP9.79□□□□□ -0.84
U2SURP-211ENST00000488497 RBM6P78332 1123 aaKnown RBP9.79□□□□□ -0.84
U2SURP-211ENST00000488497 AHDC1Q5TGY3 1603 aaPredicted RBP9.79□□□□□ -0.84
U2SURP-211ENST00000488497 ROCK1Q13464 1354 aa9.78□□□□□ -0.84
U2SURP-211ENST00000488497 LOC105371045A0A1W2PR82 267 aa9.78□□□□□ -0.84
U2SURP-211ENST00000488497 CHD2O14647 1828 aaKnown RBP9.77□□□□□ -0.85
U2SURP-211ENST00000488497 NUP155O75694 1391 aa9.77□□□□□ -0.85
U2SURP-211ENST00000488497 AFF2P51816 1311 aa9.76□□□□□ -0.85
U2SURP-211ENST00000488497 GCC2Q8IWJ2 1684 aa9.76□□□□□ -0.85
U2SURP-211ENST00000488497 NUTM2DQ5VT03 806 aaPredicted RBP9.76□□□□□ -0.85
U2SURP-211ENST00000488497 BRINP3Q76B58 766 aa9.76□□□□□ -0.85
U2SURP-211ENST00000488497 COL16A1Q07092 1604 aaPredicted RBP9.76□□□□□ -0.85
U2SURP-211ENST00000488497 ATAD2Q6PL18 1390 aa9.76□□□□□ -0.85
U2SURP-211ENST00000488497 SETD5Q9C0A6 1442 aa9.75□□□□□ -0.85
U2SURP-211ENST00000488497 SHPRHQ149N8 1683 aa9.75□□□□□ -0.85
U2SURP-211ENST00000488497 CCDC125Q86Z20 511 aa9.75□□□□□ -0.85
U2SURP-211ENST00000488497 QTRT2Q9H974 415 aaKnown RBP9.75□□□□□ -0.85
U2SURP-211ENST00000488497 TMEM131LA2VDJ0 1609 aa9.74□□□□□ -0.85
U2SURP-211ENST00000488497 C8orf37Q96NL8 207 aa9.74□□□□□ -0.85
U2SURP-211ENST00000488497 VGFO15240 615 aaPredicted RBP9.74□□□□□ -0.85
U2SURP-211ENST00000488497 ADAMTS13Q76LX8 1427 aa9.74□□□□□ -0.85
U2SURP-211ENST00000488497 ZRANB1Q9UGI0 708 aa9.74□□□□□ -0.85
U2SURP-211ENST00000488497 TRPC5Q9UL62 973 aaPredicted RBP9.74□□□□□ -0.85
U2SURP-211ENST00000488497 UNC13BO14795 1591 aa9.73□□□□□ -0.85
U2SURP-211ENST00000488497 LRPPRCP42704 1394 aaKnown RBP9.72□□□□□ -0.85
U2SURP-211ENST00000488497 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.72□□□□□ -0.85
U2SURP-211ENST00000488497 ADGRL3Q9HAR2 1447 aa9.72□□□□□ -0.85
U2SURP-211ENST00000488497 RPGRIP1LQ68CZ1 1315 aa9.71□□□□□ -0.85
U2SURP-211ENST00000488497 ASXL1Q8IXJ9 1541 aa9.71□□□□□ -0.85
U2SURP-211ENST00000488497 LRP6O75581 1613 aa9.71□□□□□ -0.86
U2SURP-211ENST00000488497 PTCH1Q13635 1447 aa9.7□□□□□ -0.86
U2SURP-211ENST00000488497 SETD1AO15047 1707 aaKnown RBP9.7□□□□□ -0.86
U2SURP-211ENST00000488497 SF3B2Q13435 895 aaKnown RBP9.7□□□□□ -0.86
U2SURP-211ENST00000488497 IQGAP3Q86VI3 1631 aa9.7□□□□□ -0.86
U2SURP-211ENST00000488497 ACIN1Q9UKV3 1341 aaKnown RBP9.7□□□□□ -0.86
U2SURP-211ENST00000488497 USP21Q9UK80 565 aa9.7□□□□□ -0.86
U2SURP-211ENST00000488497 NPHP3Q7Z494 1330 aa9.69□□□□□ -0.86
U2SURP-211ENST00000488497 MST1RQ04912 1400 aa9.69□□□□□ -0.86
U2SURP-211ENST00000488497 PNPLA6Q8IY17 1366 aa9.69□□□□□ -0.86
U2SURP-211ENST00000488497 SETBP1Q9Y6X0 1596 aa9.69□□□□□ -0.86
U2SURP-211ENST00000488497 ADAMTS2O95450 1211 aa9.68□□□□□ -0.86
U2SURP-211ENST00000488497 ITGAEP38570 1179 aa9.68□□□□□ -0.86
U2SURP-211ENST00000488497 HFM1A2PYH4 1435 aa9.67□□□□□ -0.86
U2SURP-211ENST00000488497 HAP1P54257 671 aaPredicted RBP9.66□□□□□ -0.86
U2SURP-211ENST00000488497 E9PCH4 1651 aa9.66□□□□□ -0.86
U2SURP-211ENST00000488497 PTPRUQ92729 1446 aa9.65□□□□□ -0.86
U2SURP-211ENST00000488497 MYO5BQ9ULV0 1848 aa9.65□□□□□ -0.86
U2SURP-211ENST00000488497 C1orf167Q5SNV9 1468 aa9.65□□□□□ -0.86
U2SURP-211ENST00000488497 SOS2Q07890 1332 aaPredicted RBP9.65□□□□□ -0.87
U2SURP-211ENST00000488497 NHSL1Q5SYE7 1610 aa9.65□□□□□ -0.87
U2SURP-211ENST00000488497 XRN1Q8IZH2 1706 aaKnown RBP9.64□□□□□ -0.87
U2SURP-211ENST00000488497 RGS12O14924 1447 aa9.64□□□□□ -0.87
U2SURP-211ENST00000488497 FNBP4Q8N3X1 1017 aaPredicted RBP9.64□□□□□ -0.87
U2SURP-211ENST00000488497 PSME1Q06323 249 aa9.64□□□□□ -0.87
U2SURP-211ENST00000488497 METP08581 1390 aa9.63□□□□□ -0.87
U2SURP-211ENST00000488497 ESCO1Q5FWF5 840 aa9.63□□□□□ -0.87
U2SURP-211ENST00000488497 SPHKAPQ2M3C7 1700 aa9.62□□□□□ -0.87
U2SURP-211ENST00000488497 PRAG1Q86YV5 1406 aa9.6□□□□□ -0.87
U2SURP-211ENST00000488497 SLC4A1APQ9BWU0 796 aaKnown RBP9.6□□□□□ -0.87
U2SURP-211ENST00000488497 GJD4Q96KN9 370 aaPredicted RBP9.6□□□□□ -0.87
U2SURP-211ENST00000488497 ATRNO75882 1429 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms