RNA–Protein interactions for RNA: ENST00000488250.5

RAPGEF3-211, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-211ENST00000488250 NOS1P29475 1434 aa21.85■■□□□ 1.09
RAPGEF3-211ENST00000488250 FAM69CQ0P6D2 419 aa21.84■■□□□ 1.09
RAPGEF3-211ENST00000488250 YEATS2Q9ULM3 1422 aa21.83■■□□□ 1.09
RAPGEF3-211ENST00000488250 PER1O15534 1290 aaPredicted RBP21.83■■□□□ 1.09
RAPGEF3-211ENST00000488250 EIF3AQ14152 1382 aaKnown RBP21.83■■□□□ 1.08
RAPGEF3-211ENST00000488250 FAM9BQ8IZU0 186 aa21.82■■□□□ 1.08
RAPGEF3-211ENST00000488250 PIK3C2BO00750 1634 aa21.81■■□□□ 1.08
RAPGEF3-211ENST00000488250 ZBED9Q6R2W3 1325 aa21.81■■□□□ 1.08
RAPGEF3-211ENST00000488250 MYBBP1AQ9BQG0 1328 aaKnown RBP21.8■■□□□ 1.08
RAPGEF3-211ENST00000488250 BRD4O60885 1362 aaPredicted RBP21.8■■□□□ 1.08
RAPGEF3-211ENST00000488250 PARD3Q8TEW0 1356 aa21.8■■□□□ 1.08
RAPGEF3-211ENST00000488250 TSPOAP1O95153 1857 aa21.8■■□□□ 1.08
RAPGEF3-211ENST00000488250 RPGRIP1LQ68CZ1 1315 aa21.8■■□□□ 1.08
RAPGEF3-211ENST00000488250 ADGRF5Q8IZF2 1346 aa21.8■■□□□ 1.08
RAPGEF3-211ENST00000488250 PPLO60437 1756 aa21.79■■□□□ 1.08
RAPGEF3-211ENST00000488250 SIGLEC1Q9BZZ2 1709 aa21.79■■□□□ 1.08
RAPGEF3-211ENST00000488250 SETBP1Q9Y6X0 1596 aa21.78■■□□□ 1.08
RAPGEF3-211ENST00000488250 CDCA8Q53HL2 280 aa21.78■■□□□ 1.08
RAPGEF3-211ENST00000488250 REREQ9P2R6 1566 aa21.78■■□□□ 1.08
RAPGEF3-211ENST00000488250 SLC24A1O60721 1099 aa21.78■■□□□ 1.08
RAPGEF3-211ENST00000488250 SYNMO15061 1565 aa21.76■■□□□ 1.07
RAPGEF3-211ENST00000488250 PNISRQ8TF01 805 aaKnown RBP21.76■■□□□ 1.07
RAPGEF3-211ENST00000488250 CFAP70Q5T0N1 1121 aa21.75■■□□□ 1.07
RAPGEF3-211ENST00000488250 PIK3C2GO75747 1445 aa21.75■■□□□ 1.07
RAPGEF3-211ENST00000488250 MYO3AQ8NEV4 1616 aa21.74■■□□□ 1.07
RAPGEF3-211ENST00000488250 TMC1Q8TDI8 760 aa21.73■■□□□ 1.07
RAPGEF3-211ENST00000488250 PANK3Q9H999 370 aa21.73■■□□□ 1.07
RAPGEF3-211ENST00000488250 LRPPRCP42704 1394 aaKnown RBP21.73■■□□□ 1.07
RAPGEF3-211ENST00000488250 AGLP35573 1532 aa21.72■■□□□ 1.07
RAPGEF3-211ENST00000488250 CFAP65Q6ZU64 1925 aaKnown RBP21.72■■□□□ 1.07
RAPGEF3-211ENST00000488250 NEFLP07196 543 aa21.72■■□□□ 1.07
RAPGEF3-211ENST00000488250 SBNO2Q9Y2G9 1366 aa21.71■■□□□ 1.07
RAPGEF3-211ENST00000488250 NLRP13Q86W25 1043 aa21.7■■□□□ 1.07
RAPGEF3-211ENST00000488250 FKBP8Q14318 412 aa21.7■■□□□ 1.06
RAPGEF3-211ENST00000488250 CNGB1Q14028 1251 aaPredicted RBP21.69■■□□□ 1.06
RAPGEF3-211ENST00000488250 C14orf93Q9H972 538 aaKnown RBP21.69■■□□□ 1.06
RAPGEF3-211ENST00000488250 CHGAP10645 457 aaKnown RBP21.68■■□□□ 1.06
RAPGEF3-211ENST00000488250 SLC52A1Q9NWF4 448 aa21.68■■□□□ 1.06
RAPGEF3-211ENST00000488250 PPP6R1Q9UPN7 881 aa21.68■■□□□ 1.06
RAPGEF3-211ENST00000488250 ADGRB1O14514 1584 aa21.68■■□□□ 1.06
RAPGEF3-211ENST00000488250 KDM5AP29375 1690 aaKnown RBP21.67■■□□□ 1.06
RAPGEF3-211ENST00000488250 NEXMIFQ5QGS0 1516 aa21.67■■□□□ 1.06
RAPGEF3-211ENST00000488250 MYOM1P52179 1685 aa21.66■■□□□ 1.06
RAPGEF3-211ENST00000488250 PREX1Q8TCU6 1659 aa21.66■■□□□ 1.06
RAPGEF3-211ENST00000488250 ZFYVE9O95405 1425 aa21.65■■□□□ 1.06
RAPGEF3-211ENST00000488250 ERVK-7P63135 1459 aa21.65■■□□□ 1.06
RAPGEF3-211ENST00000488250 TRHP20396 242 aaPredicted RBP21.65■■□□□ 1.06
RAPGEF3-211ENST00000488250 INSRP06213 1382 aa21.64■■□□□ 1.05
RAPGEF3-211ENST00000488250 VGFO15240 615 aaPredicted RBP21.63■■□□□ 1.05
RAPGEF3-211ENST00000488250 NPC1L1Q9UHC9 1359 aa21.62■■□□□ 1.05
RAPGEF3-211ENST00000488250 PELP1Q8IZL8 1130 aaKnown RBP21.62■■□□□ 1.05
RAPGEF3-211ENST00000488250 IDI1Q13907 227 aa21.61■■□□□ 1.05
RAPGEF3-211ENST00000488250 SMG6Q86US8 1419 aaKnown RBP21.6■■□□□ 1.05
RAPGEF3-211ENST00000488250 TMEM131LA2VDJ0 1609 aa21.6■■□□□ 1.05
RAPGEF3-211ENST00000488250 KNSTRNQ9Y448 316 aa21.59■■□□□ 1.05
RAPGEF3-211ENST00000488250 ASXL1Q8IXJ9 1541 aa21.59■■□□□ 1.05
RAPGEF3-211ENST00000488250 CENPJQ9HC77 1338 aaPredicted RBP21.59■■□□□ 1.05
RAPGEF3-211ENST00000488250 AMER1Q5JTC6 1135 aaPredicted RBP21.59■■□□□ 1.05
RAPGEF3-211ENST00000488250 CC2D1BQ5T0F9 858 aaKnown RBP21.59■■□□□ 1.05
RAPGEF3-211ENST00000488250 ARHGEF40Q8TER5 1519 aa21.59■■□□□ 1.05
RAPGEF3-211ENST00000488250 ERICH6BQ5W0A0 696 aa21.56■■□□□ 1.04
RAPGEF3-211ENST00000488250 QRICH2Q9H0J4 1663 aa21.55■■□□□ 1.04
RAPGEF3-211ENST00000488250 MYO5BQ9ULV0 1848 aa21.52■■□□□ 1.04
RAPGEF3-211ENST00000488250 SPATA31D1Q6ZQQ2 1576 aa21.52■■□□□ 1.04
RAPGEF3-211ENST00000488250 PUS7Q96PZ0 661 aaKnown RBP21.51■■□□□ 1.03
RAPGEF3-211ENST00000488250 TRAK1Q9UPV9 953 aa21.51■■□□□ 1.03
RAPGEF3-211ENST00000488250 NUDCQ9Y266 331 aa21.51■■□□□ 1.03
RAPGEF3-211ENST00000488250 CLTCQ00610 1675 aaKnown RBP21.51■■□□□ 1.03
RAPGEF3-211ENST00000488250 BLMP54132 1417 aaPredicted RBP21.51■■□□□ 1.03
RAPGEF3-211ENST00000488250 ARHGEF28Q8N1W1 1705 aaKnown RBP21.5■■□□□ 1.03
RAPGEF3-211ENST00000488250 TMEM132EQ6IEE7 984 aa21.5■■□□□ 1.03
RAPGEF3-211ENST00000488250 BCANQ96GW7 911 aa21.5■■□□□ 1.03
RAPGEF3-211ENST00000488250 PPP2R1AP30153 589 aa21.49■■□□□ 1.03
RAPGEF3-211ENST00000488250 FBXO31Q5XUX0 539 aaPredicted RBP21.49■■□□□ 1.03
RAPGEF3-211ENST00000488250 CARD14Q9BXL6 1004 aa21.44■■□□□ 1.02
RAPGEF3-211ENST00000488250 RNF123Q5XPI4 1314 aa21.43■■□□□ 1.02
RAPGEF3-211ENST00000488250 PDE3BQ13370 1112 aa21.43■■□□□ 1.02
RAPGEF3-211ENST00000488250 NUTM2DQ5VT03 806 aaPredicted RBP21.43■■□□□ 1.02
RAPGEF3-211ENST00000488250 A2ML1A8K2U0 1454 aa21.41■■□□□ 1.02
RAPGEF3-211ENST00000488250 TULP4Q9NRJ4 1543 aa21.41■■□□□ 1.02
RAPGEF3-211ENST00000488250 USP32Q8NFA0 1604 aa21.41■■□□□ 1.02
RAPGEF3-211ENST00000488250 EVC2Q86UK5 1308 aa21.4■■□□□ 1.02
RAPGEF3-211ENST00000488250 ALKQ9UM73 1620 aa21.38■■□□□ 1.01
RAPGEF3-211ENST00000488250 PTPRMP28827 1452 aa21.38■■□□□ 1.01
RAPGEF3-211ENST00000488250 YTHDC2Q9H6S0 1430 aaKnown RBP21.36■■□□□ 1.01
RAPGEF3-211ENST00000488250 IRX6P78412 446 aaPredicted RBP21.36■■□□□ 1.01
RAPGEF3-211ENST00000488250 STAG3Q9UJ98 1225 aa21.36■■□□□ 1.01
RAPGEF3-211ENST00000488250 PPP4R2Q9NY27 417 aa21.35■■□□□ 1.01
RAPGEF3-211ENST00000488250 ZMYM3Q14202 1370 aa21.35■■□□□ 1.01
RAPGEF3-211ENST00000488250 NINLQ9Y2I6 1382 aa21.35■■□□□ 1.01
RAPGEF3-211ENST00000488250 ADAMTS8Q9UP79 889 aa21.35■■□□□ 1.01
RAPGEF3-211ENST00000488250 NSD3Q9BZ95 1437 aa21.35■■□□□ 1.01
RAPGEF3-211ENST00000488250 MLECQ14165 292 aa21.34■■□□□ 1.01
RAPGEF3-211ENST00000488250 SLC12A5Q9H2X9 1139 aa21.34■■□□□ 1.01
RAPGEF3-211ENST00000488250 RIMS2Q9UQ26 1411 aa21.33■■□□□ 1.01
RAPGEF3-211ENST00000488250 WDR43Q15061 677 aaKnown RBP eCLIP21.33■■□□□ 1
RAPGEF3-211ENST00000488250 ANKRD36BQ8N2N9 1353 aa21.32■■□□□ 1
RAPGEF3-211ENST00000488250 DLC1Q96QB1 1528 aa21.31■■□□□ 1
RAPGEF3-211ENST00000488250 ESF1Q9H501 851 aaKnown RBP21.31■■□□□ 1
RAPGEF3-211ENST00000488250 SETD1AO15047 1707 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms