RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 NBPF26B4DH59 902 aa7.73□□□□□ -1.17
HFM1-208ENST00000488023 TNFRSF10AO00220 468 aa7.73□□□□□ -1.17
HFM1-208ENST00000488023 NFX1Q12986 1120 aaKnown RBP7.73□□□□□ -1.17
HFM1-208ENST00000488023 ZNF697Q5TEC3 545 aa7.73□□□□□ -1.17
HFM1-208ENST00000488023 LIAT1Q6ZQX7 453 aa7.73□□□□□ -1.17
HFM1-208ENST00000488023 HDGFP51858 240 aaKnown RBP7.72□□□□□ -1.17
HFM1-208ENST00000488023 SPRYD3Q8NCJ5 442 aa7.72□□□□□ -1.17
HFM1-208ENST00000488023 DACH1Q9UI36 760 aa7.71□□□□□ -1.18
HFM1-208ENST00000488023 PRIM1P49642 420 aaKnown RBP7.7□□□□□ -1.18
HFM1-208ENST00000488023 PLCB2Q00722 1185 aa7.7□□□□□ -1.18
HFM1-208ENST00000488023 ANKLE1Q8NAG6 615 aa7.7□□□□□ -1.18
HFM1-208ENST00000488023 NECTIN2Q92692 538 aa7.7□□□□□ -1.18
HFM1-208ENST00000488023 PPEF1O14829 653 aaPredicted RBP7.69□□□□□ -1.18
HFM1-208ENST00000488023 NUDT18Q6ZVK8 323 aa7.69□□□□□ -1.18
HFM1-208ENST00000488023 CERKQ8TCT0 537 aa7.69□□□□□ -1.18
HFM1-208ENST00000488023 CRIPAKQ8N1N5 446 aa7.68□□□□□ -1.18
HFM1-208ENST00000488023 GMPR2Q9P2T1 348 aaKnown RBP7.68□□□□□ -1.18
HFM1-208ENST00000488023 E2F4Q16254 413 aa7.67□□□□□ -1.18
HFM1-208ENST00000488023 LCE2CQ5TA81 110 aa7.67□□□□□ -1.18
HFM1-208ENST00000488023 GRXCR2A6NFK2 248 aa7.67□□□□□ -1.18
HFM1-208ENST00000488023 SWT1Q5T5J6 900 aaKnown RBP7.67□□□□□ -1.18
HFM1-208ENST00000488023 PAXIP1Q6ZW49 1069 aaPredicted RBP7.67□□□□□ -1.18
HFM1-208ENST00000488023 SLF2Q8IX21 1173 aa7.67□□□□□ -1.18
HFM1-208ENST00000488023 ARIH1Q9Y4X5 557 aaPredicted RBP7.67□□□□□ -1.18
HFM1-208ENST00000488023 C11orf95C9JLR9 678 aaPredicted RBP7.66□□□□□ -1.18
HFM1-208ENST00000488023 TLL1O43897 1013 aa7.65□□□□□ -1.18
HFM1-208ENST00000488023 BLOC1S3Q6QNY0 202 aa7.65□□□□□ -1.18
HFM1-208ENST00000488023 CFAP44Q96MT7 982 aa7.65□□□□□ -1.18
HFM1-208ENST00000488023 PCDHB3Q9Y5E6 796 aa7.65□□□□□ -1.18
HFM1-208ENST00000488023 S1PR4O95977 384 aa7.64□□□□□ -1.19
HFM1-208ENST00000488023 OSBPP22059 807 aa7.63□□□□□ -1.19
HFM1-208ENST00000488023 CDHR5Q9HBB8 845 aa7.63□□□□□ -1.19
HFM1-208ENST00000488023 PKD2L1Q9P0L9 805 aa7.63□□□□□ -1.19
HFM1-208ENST00000488023 AVPP01185 164 aa7.63□□□□□ -1.19
HFM1-208ENST00000488023 RBM27Q9P2N5 1060 aaKnown RBP7.62□□□□□ -1.19
HFM1-208ENST00000488023 WDR70Q9NW82 654 aa7.61□□□□□ -1.19
HFM1-208ENST00000488023 PLA2G2CQ5R387 149 aa7.6□□□□□ -1.19
HFM1-208ENST00000488023 PRR14Q9BWN1 585 aa7.6□□□□□ -1.19
HFM1-208ENST00000488023 AXIN1O15169 862 aa7.6□□□□□ -1.19
HFM1-208ENST00000488023 FOXC1Q12948 553 aa7.6□□□□□ -1.19
HFM1-208ENST00000488023 LMOD2Q6P5Q4 547 aa7.6□□□□□ -1.19
HFM1-208ENST00000488023 TTC13Q8NBP0 860 aa7.6□□□□□ -1.19
HFM1-208ENST00000488023 TERTO14746 1132 aaKnown RBP7.58□□□□□ -1.2
HFM1-208ENST00000488023 SUZ12Q15022 739 aaKnown RBP7.57□□□□□ -1.2
HFM1-208ENST00000488023 NPDC1Q9NQX5 325 aaPredicted RBP7.57□□□□□ -1.2
HFM1-208ENST00000488023 TOR4AQ9NXH8 423 aa7.57□□□□□ -1.2
HFM1-208ENST00000488023 PRKCSHP14314 528 aaPredicted RBP7.57□□□□□ -1.2
HFM1-208ENST00000488023 SMCPP49901 116 aaPredicted RBP7.57□□□□□ -1.2
HFM1-208ENST00000488023 CTC1Q2NKJ3 1217 aa7.57□□□□□ -1.2
HFM1-208ENST00000488023 PADI6Q6TGC4 694 aa7.57□□□□□ -1.2
HFM1-208ENST00000488023 SLC4A3P48751 1232 aa7.56□□□□□ -1.2
HFM1-208ENST00000488023 ADH1BP00325 375 aa7.54□□□□□ -1.2
HFM1-208ENST00000488023 FAM181BA6NEQ2 426 aa7.54□□□□□ -1.2
HFM1-208ENST00000488023 SNRPBP14678 240 aaKnown RBP7.54□□□□□ -1.2
HFM1-208ENST00000488023 EYA1Q99502 592 aa7.54□□□□□ -1.2
HFM1-208ENST00000488023 LORP23490 312 aaPredicted RBP7.52□□□□□ -1.21
HFM1-208ENST00000488023 ACTN4O43707 911 aaKnown RBP7.51□□□□□ -1.21
HFM1-208ENST00000488023 HAP1P54257 671 aaPredicted RBP7.51□□□□□ -1.21
HFM1-208ENST00000488023 CYP4X1Q8N118 509 aa7.51□□□□□ -1.21
HFM1-208ENST00000488023 SLC6A16Q9GZN6 736 aa7.51□□□□□ -1.21
HFM1-208ENST00000488023 TSHZ2Q9NRE2 1034 aa7.51□□□□□ -1.21
HFM1-208ENST00000488023 ATP13A2Q9NQ11 1180 aa7.49□□□□□ -1.21
HFM1-208ENST00000488023 KDM2AQ9Y2K7 1162 aa7.49□□□□□ -1.21
HFM1-208ENST00000488023 RPIAP49247 311 aa7.48□□□□□ -1.21
HFM1-208ENST00000488023 VSIG10Q8N0Z9 540 aa7.47□□□□□ -1.21
HFM1-208ENST00000488023 TRIM47Q96LD4 638 aa7.47□□□□□ -1.21
HFM1-208ENST00000488023 MLLT3P42568 568 aaPredicted RBP7.47□□□□□ -1.21
HFM1-208ENST00000488023 KMT5BQ4FZB7 885 aa7.47□□□□□ -1.21
HFM1-208ENST00000488023 ZSCAN1Q8NBB4 408 aa7.47□□□□□ -1.21
HFM1-208ENST00000488023 NR1I2O75469 434 aa7.45□□□□□ -1.22
HFM1-208ENST00000488023 SENP2Q9HC62 589 aa7.45□□□□□ -1.22
HFM1-208ENST00000488023 DNAJB2P25686 324 aa7.44□□□□□ -1.22
HFM1-208ENST00000488023 GMPRP36959 345 aa7.44□□□□□ -1.22
HFM1-208ENST00000488023 CD2BP2O95400 341 aaKnown RBP7.44□□□□□ -1.22
HFM1-208ENST00000488023 CFHP08603 1231 aa7.44□□□□□ -1.22
HFM1-208ENST00000488023 PTGDRQ13258 359 aa7.44□□□□□ -1.22
HFM1-208ENST00000488023 ARHGEF1Q92888 912 aaKnown RBP7.44□□□□□ -1.22
HFM1-208ENST00000488023 BCANQ96GW7 911 aa7.44□□□□□ -1.22
HFM1-208ENST00000488023 RBM46Q8TBY0 533 aaKnown RBP7.43□□□□□ -1.22
HFM1-208ENST00000488023 TMEM134Q9H6X4 195 aa7.43□□□□□ -1.22
HFM1-208ENST00000488023 TTC24A2A3L6 582 aaPredicted RBP7.42□□□□□ -1.22
HFM1-208ENST00000488023 SMPD1P17405 629 aa7.42□□□□□ -1.22
HFM1-208ENST00000488023 ADGRG1Q9Y653 693 aa7.42□□□□□ -1.22
HFM1-208ENST00000488023 SCUBE3Q8IX30 993 aa7.41□□□□□ -1.22
HFM1-208ENST00000488023 SLC16A10Q8TF71 515 aa7.41□□□□□ -1.22
HFM1-208ENST00000488023 RCCD1A6NED2 376 aa7.4□□□□□ -1.23
HFM1-208ENST00000488023 KIFC2Q96AC6 838 aa7.4□□□□□ -1.23
HFM1-208ENST00000488023 SPSB2Q99619 263 aa7.4□□□□□ -1.23
HFM1-208ENST00000488023 KRTAP4-8Q9BYQ9 185 aa7.4□□□□□ -1.23
HFM1-208ENST00000488023 SLC10A3P09131 477 aa7.39□□□□□ -1.23
HFM1-208ENST00000488023 FAM161AQ3B820 660 aa7.39□□□□□ -1.23
HFM1-208ENST00000488023 KCNV2Q8TDN2 545 aa7.39□□□□□ -1.23
HFM1-208ENST00000488023 FCF1Q9Y324 198 aaKnown RBP7.38□□□□□ -1.23
HFM1-208ENST00000488023 NUTM2FA1L443 756 aa7.38□□□□□ -1.23
HFM1-208ENST00000488023 SNIP1Q8TAD8 396 aaKnown RBP7.37□□□□□ -1.23
HFM1-208ENST00000488023 NXF1Q9UBU9 619 aaKnown RBP7.37□□□□□ -1.23
HFM1-208ENST00000488023 PUS10Q3MIT2 529 aaKnown RBP7.35□□□□□ -1.23
HFM1-208ENST00000488023 IRF7Q92985 503 aa7.35□□□□□ -1.23
HFM1-208ENST00000488023 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.35□□□□□ -1.23
HFM1-208ENST00000488023 J3QL48 77 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms