RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 NBPF26B4DH59 902 aa7.73□□□□□ -1.17
HFM1-208ENST00000488023 TNFRSF10AO00220 468 aa7.73□□□□□ -1.17
HFM1-208ENST00000488023 NFX1Q12986 1120 aaKnown RBP7.73□□□□□ -1.17
HFM1-208ENST00000488023 ZNF697Q5TEC3 545 aa7.73□□□□□ -1.17
HFM1-208ENST00000488023 LIAT1Q6ZQX7 453 aa7.73□□□□□ -1.17
HFM1-208ENST00000488023 HDGFP51858 240 aaKnown RBP7.72□□□□□ -1.17
HFM1-208ENST00000488023 SPRYD3Q8NCJ5 442 aa7.72□□□□□ -1.17
HFM1-208ENST00000488023 DACH1Q9UI36 760 aa7.71□□□□□ -1.18
HFM1-208ENST00000488023 PRIM1P49642 420 aaKnown RBP7.7□□□□□ -1.18
HFM1-208ENST00000488023 PLCB2Q00722 1185 aa7.7□□□□□ -1.18
HFM1-208ENST00000488023 ANKLE1Q8NAG6 615 aa7.7□□□□□ -1.18
HFM1-208ENST00000488023 NECTIN2Q92692 538 aa7.7□□□□□ -1.18
HFM1-208ENST00000488023 PPEF1O14829 653 aaPredicted RBP7.69□□□□□ -1.18
HFM1-208ENST00000488023 NUDT18Q6ZVK8 323 aa7.69□□□□□ -1.18
HFM1-208ENST00000488023 CERKQ8TCT0 537 aa7.69□□□□□ -1.18
HFM1-208ENST00000488023 CRIPAKQ8N1N5 446 aa7.68□□□□□ -1.18
HFM1-208ENST00000488023 GMPR2Q9P2T1 348 aaKnown RBP7.68□□□□□ -1.18
HFM1-208ENST00000488023 E2F4Q16254 413 aa7.67□□□□□ -1.18
HFM1-208ENST00000488023 LCE2CQ5TA81 110 aa7.67□□□□□ -1.18
HFM1-208ENST00000488023 GRXCR2A6NFK2 248 aa7.67□□□□□ -1.18
HFM1-208ENST00000488023 SWT1Q5T5J6 900 aaKnown RBP7.67□□□□□ -1.18
HFM1-208ENST00000488023 PAXIP1Q6ZW49 1069 aaPredicted RBP7.67□□□□□ -1.18
HFM1-208ENST00000488023 SLF2Q8IX21 1173 aa7.67□□□□□ -1.18
HFM1-208ENST00000488023 ARIH1Q9Y4X5 557 aaPredicted RBP7.67□□□□□ -1.18
HFM1-208ENST00000488023 C11orf95C9JLR9 678 aaPredicted RBP7.66□□□□□ -1.18
HFM1-208ENST00000488023 TLL1O43897 1013 aa7.65□□□□□ -1.18
HFM1-208ENST00000488023 BLOC1S3Q6QNY0 202 aa7.65□□□□□ -1.18
HFM1-208ENST00000488023 CFAP44Q96MT7 982 aa7.65□□□□□ -1.18
HFM1-208ENST00000488023 PCDHB3Q9Y5E6 796 aa7.65□□□□□ -1.18
HFM1-208ENST00000488023 S1PR4O95977 384 aa7.64□□□□□ -1.19
HFM1-208ENST00000488023 OSBPP22059 807 aa7.63□□□□□ -1.19
HFM1-208ENST00000488023 CDHR5Q9HBB8 845 aa7.63□□□□□ -1.19
HFM1-208ENST00000488023 PKD2L1Q9P0L9 805 aa7.63□□□□□ -1.19
HFM1-208ENST00000488023 AVPP01185 164 aa7.63□□□□□ -1.19
HFM1-208ENST00000488023 RBM27Q9P2N5 1060 aaKnown RBP7.62□□□□□ -1.19
HFM1-208ENST00000488023 WDR70Q9NW82 654 aa7.61□□□□□ -1.19
HFM1-208ENST00000488023 PLA2G2CQ5R387 149 aa7.6□□□□□ -1.19
HFM1-208ENST00000488023 PRR14Q9BWN1 585 aa7.6□□□□□ -1.19
HFM1-208ENST00000488023 AXIN1O15169 862 aa7.6□□□□□ -1.19
HFM1-208ENST00000488023 FOXC1Q12948 553 aa7.6□□□□□ -1.19
HFM1-208ENST00000488023 LMOD2Q6P5Q4 547 aa7.6□□□□□ -1.19
HFM1-208ENST00000488023 TTC13Q8NBP0 860 aa7.6□□□□□ -1.19
HFM1-208ENST00000488023 TERTO14746 1132 aaKnown RBP7.58□□□□□ -1.2
HFM1-208ENST00000488023 SUZ12Q15022 739 aaKnown RBP7.57□□□□□ -1.2
HFM1-208ENST00000488023 NPDC1Q9NQX5 325 aaPredicted RBP7.57□□□□□ -1.2
HFM1-208ENST00000488023 TOR4AQ9NXH8 423 aa7.57□□□□□ -1.2
HFM1-208ENST00000488023 PRKCSHP14314 528 aaPredicted RBP7.57□□□□□ -1.2
HFM1-208ENST00000488023 SMCPP49901 116 aaPredicted RBP7.57□□□□□ -1.2
HFM1-208ENST00000488023 CTC1Q2NKJ3 1217 aa7.57□□□□□ -1.2
HFM1-208ENST00000488023 PADI6Q6TGC4 694 aa7.57□□□□□ -1.2
HFM1-208ENST00000488023 SLC4A3P48751 1232 aa7.56□□□□□ -1.2
HFM1-208ENST00000488023 ADH1BP00325 375 aa7.54□□□□□ -1.2
HFM1-208ENST00000488023 FAM181BA6NEQ2 426 aa7.54□□□□□ -1.2
HFM1-208ENST00000488023 SNRPBP14678 240 aaKnown RBP7.54□□□□□ -1.2
HFM1-208ENST00000488023 EYA1Q99502 592 aa7.54□□□□□ -1.2
HFM1-208ENST00000488023 LORP23490 312 aaPredicted RBP7.52□□□□□ -1.21
HFM1-208ENST00000488023 ACTN4O43707 911 aaKnown RBP7.51□□□□□ -1.21
HFM1-208ENST00000488023 HAP1P54257 671 aaPredicted RBP7.51□□□□□ -1.21
HFM1-208ENST00000488023 CYP4X1Q8N118 509 aa7.51□□□□□ -1.21
HFM1-208ENST00000488023 SLC6A16Q9GZN6 736 aa7.51□□□□□ -1.21
HFM1-208ENST00000488023 TSHZ2Q9NRE2 1034 aa7.51□□□□□ -1.21
HFM1-208ENST00000488023 ATP13A2Q9NQ11 1180 aa7.49□□□□□ -1.21
HFM1-208ENST00000488023 KDM2AQ9Y2K7 1162 aa7.49□□□□□ -1.21
HFM1-208ENST00000488023 RPIAP49247 311 aa7.48□□□□□ -1.21
HFM1-208ENST00000488023 VSIG10Q8N0Z9 540 aa7.47□□□□□ -1.21
HFM1-208ENST00000488023 TRIM47Q96LD4 638 aa7.47□□□□□ -1.21
HFM1-208ENST00000488023 MLLT3P42568 568 aaPredicted RBP7.47□□□□□ -1.21
HFM1-208ENST00000488023 KMT5BQ4FZB7 885 aa7.47□□□□□ -1.21
HFM1-208ENST00000488023 ZSCAN1Q8NBB4 408 aa7.47□□□□□ -1.21
HFM1-208ENST00000488023 NR1I2O75469 434 aa7.45□□□□□ -1.22
HFM1-208ENST00000488023 SENP2Q9HC62 589 aa7.45□□□□□ -1.22
HFM1-208ENST00000488023 DNAJB2P25686 324 aa7.44□□□□□ -1.22
HFM1-208ENST00000488023 GMPRP36959 345 aa7.44□□□□□ -1.22
HFM1-208ENST00000488023 CD2BP2O95400 341 aaKnown RBP7.44□□□□□ -1.22
HFM1-208ENST00000488023 CFHP08603 1231 aa7.44□□□□□ -1.22
HFM1-208ENST00000488023 PTGDRQ13258 359 aa7.44□□□□□ -1.22
HFM1-208ENST00000488023 ARHGEF1Q92888 912 aaKnown RBP7.44□□□□□ -1.22
HFM1-208ENST00000488023 BCANQ96GW7 911 aa7.44□□□□□ -1.22
HFM1-208ENST00000488023 RBM46Q8TBY0 533 aaKnown RBP7.43□□□□□ -1.22
HFM1-208ENST00000488023 TMEM134Q9H6X4 195 aa7.43□□□□□ -1.22
HFM1-208ENST00000488023 TTC24A2A3L6 582 aaPredicted RBP7.42□□□□□ -1.22
HFM1-208ENST00000488023 SMPD1P17405 629 aa7.42□□□□□ -1.22
HFM1-208ENST00000488023 ADGRG1Q9Y653 693 aa7.42□□□□□ -1.22
HFM1-208ENST00000488023 SCUBE3Q8IX30 993 aa7.41□□□□□ -1.22
HFM1-208ENST00000488023 SLC16A10Q8TF71 515 aa7.41□□□□□ -1.22
HFM1-208ENST00000488023 RCCD1A6NED2 376 aa7.4□□□□□ -1.23
HFM1-208ENST00000488023 KIFC2Q96AC6 838 aa7.4□□□□□ -1.23
HFM1-208ENST00000488023 SPSB2Q99619 263 aa7.4□□□□□ -1.23
HFM1-208ENST00000488023 KRTAP4-8Q9BYQ9 185 aa7.4□□□□□ -1.23
HFM1-208ENST00000488023 SLC10A3P09131 477 aa7.39□□□□□ -1.23
HFM1-208ENST00000488023 FAM161AQ3B820 660 aa7.39□□□□□ -1.23
HFM1-208ENST00000488023 KCNV2Q8TDN2 545 aa7.39□□□□□ -1.23
HFM1-208ENST00000488023 FCF1Q9Y324 198 aaKnown RBP7.38□□□□□ -1.23
HFM1-208ENST00000488023 NUTM2FA1L443 756 aa7.38□□□□□ -1.23
HFM1-208ENST00000488023 SNIP1Q8TAD8 396 aaKnown RBP7.37□□□□□ -1.23
HFM1-208ENST00000488023 NXF1Q9UBU9 619 aaKnown RBP7.37□□□□□ -1.23
HFM1-208ENST00000488023 PUS10Q3MIT2 529 aaKnown RBP7.35□□□□□ -1.23
HFM1-208ENST00000488023 IRF7Q92985 503 aa7.35□□□□□ -1.23
HFM1-208ENST00000488023 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.35□□□□□ -1.23
HFM1-208ENST00000488023 J3QL48 77 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms