RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 KANK4Q5T7N3 995 aaPredicted RBP12.32□□□□□ -0.44
NECTIN3-209ENST00000488016 HS3ST6Q96QI5 342 aa12.32□□□□□ -0.44
NECTIN3-209ENST00000488016 RTN4Q9NQC3 1192 aaKnown RBP12.32□□□□□ -0.44
NECTIN3-209ENST00000488016 EHBP1L1Q8N3D4 1523 aa12.32□□□□□ -0.44
NECTIN3-209ENST00000488016 ARAP3Q8WWN8 1544 aa12.32□□□□□ -0.44
NECTIN3-209ENST00000488016 PREX2Q70Z35 1606 aa12.31□□□□□ -0.44
NECTIN3-209ENST00000488016 ERBB3P21860 1342 aa12.31□□□□□ -0.44
NECTIN3-209ENST00000488016 GPATCH8Q9UKJ3 1502 aaKnown RBP12.29□□□□□ -0.44
NECTIN3-209ENST00000488016 GTPBP6O43824 516 aaPredicted RBP12.29□□□□□ -0.44
NECTIN3-209ENST00000488016 CFAP74Q9C0B2 1584 aa12.29□□□□□ -0.44
NECTIN3-209ENST00000488016 SCAPERQ9BY12 1400 aa12.28□□□□□ -0.44
NECTIN3-209ENST00000488016 RICTORQ6R327 1708 aa12.28□□□□□ -0.44
NECTIN3-209ENST00000488016 LRRC9Q6ZRR7 1453 aa12.28□□□□□ -0.44
NECTIN3-209ENST00000488016 GPR153Q6NV75 609 aa12.28□□□□□ -0.44
NECTIN3-209ENST00000488016 DENND4BO75064 1496 aaPredicted RBP12.27□□□□□ -0.44
NECTIN3-209ENST00000488016 NCOA2Q15596 1464 aa12.27□□□□□ -0.44
NECTIN3-209ENST00000488016 ARHGEF12Q9NZN5 1544 aa12.27□□□□□ -0.44
NECTIN3-209ENST00000488016 SOCS7O14512 581 aa12.27□□□□□ -0.45
NECTIN3-209ENST00000488016 ARSIQ5FYB1 569 aa12.27□□□□□ -0.45
NECTIN3-209ENST00000488016 ZNF777Q9ULD5 760 aaPredicted RBP12.27□□□□□ -0.45
NECTIN3-209ENST00000488016 SAMD9LQ8IVG5 1584 aa12.26□□□□□ -0.45
NECTIN3-209ENST00000488016 EFCAB2Q5VUJ9 269 aa12.26□□□□□ -0.45
NECTIN3-209ENST00000488016 GPHNQ9NQX3 736 aaPredicted RBP12.26□□□□□ -0.45
NECTIN3-209ENST00000488016 ZNF644Q9H582 1327 aaPredicted RBP12.25□□□□□ -0.45
NECTIN3-209ENST00000488016 CCNB3Q8WWL7 1395 aa12.25□□□□□ -0.45
NECTIN3-209ENST00000488016 POGZQ7Z3K3 1410 aa12.25□□□□□ -0.45
NECTIN3-209ENST00000488016 YEATS2Q9ULM3 1422 aa12.25□□□□□ -0.45
NECTIN3-209ENST00000488016 ABCC1P33527 1531 aa12.25□□□□□ -0.45
NECTIN3-209ENST00000488016 SUPT6HQ7KZ85 1726 aaKnown RBP12.25□□□□□ -0.45
NECTIN3-209ENST00000488016 PHLDB1Q86UU1 1377 aa12.24□□□□□ -0.45
NECTIN3-209ENST00000488016 ITSN2Q9NZM3 1697 aa12.24□□□□□ -0.45
NECTIN3-209ENST00000488016 TRAPPC8Q9Y2L5 1435 aa12.24□□□□□ -0.45
NECTIN3-209ENST00000488016 SYCP2Q9BX26 1530 aa12.23□□□□□ -0.45
NECTIN3-209ENST00000488016 POTEB3A0JP26 581 aa12.23□□□□□ -0.45
NECTIN3-209ENST00000488016 SLC34A2O95436 690 aa12.23□□□□□ -0.45
NECTIN3-209ENST00000488016 FOXK1P85037 733 aa12.23□□□□□ -0.45
NECTIN3-209ENST00000488016 POTEBQ6S5H4 581 aa12.23□□□□□ -0.45
NECTIN3-209ENST00000488016 AFAP1Q8N556 730 aa12.23□□□□□ -0.45
NECTIN3-209ENST00000488016 SIGLEC1Q9BZZ2 1709 aa12.23□□□□□ -0.45
NECTIN3-209ENST00000488016 VARS2Q5ST30 1063 aaKnown RBP12.22□□□□□ -0.45
NECTIN3-209ENST00000488016 PPARGC1BQ86YN6 1023 aaKnown RBP12.22□□□□□ -0.45
NECTIN3-209ENST00000488016 CFDP1Q9UEE9 299 aaPredicted RBP12.22□□□□□ -0.45
NECTIN3-209ENST00000488016 MAP3K1Q13233 1512 aa12.21□□□□□ -0.45
NECTIN3-209ENST00000488016 ARHGEF40Q8TER5 1519 aa12.21□□□□□ -0.45
NECTIN3-209ENST00000488016 DISP3Q9P2K9 1392 aa12.21□□□□□ -0.45
NECTIN3-209ENST00000488016 HNRNPMP52272 730 aaKnown RBP eCLIP12.21□□□□□ -0.45
NECTIN3-209ENST00000488016 PLPP6Q8IY26 295 aa12.21□□□□□ -0.45
NECTIN3-209ENST00000488016 BBXQ8WY36 941 aaPredicted RBP12.21□□□□□ -0.45
NECTIN3-209ENST00000488016 KHSRPQ92945 711 aaKnown RBP eCLIP12.21□□□□□ -0.45
NECTIN3-209ENST00000488016 ZMYM4Q5VZL5 1548 aa12.21□□□□□ -0.46
NECTIN3-209ENST00000488016 DSG2Q14126 1118 aa12.2□□□□□ -0.46
NECTIN3-209ENST00000488016 PCDHGA4Q9Y5G9 962 aa12.2□□□□□ -0.46
NECTIN3-209ENST00000488016 ZFYVE16Q7Z3T8 1539 aa12.19□□□□□ -0.46
NECTIN3-209ENST00000488016 KDM5CP41229 1560 aa12.18□□□□□ -0.46
NECTIN3-209ENST00000488016 ZNF518AQ6AHZ1 1483 aa12.18□□□□□ -0.46
NECTIN3-209ENST00000488016 CAMSAP2Q08AD1 1489 aa12.17□□□□□ -0.46
NECTIN3-209ENST00000488016 ZNF316A6NFI3 1004 aaPredicted RBP12.17□□□□□ -0.46
NECTIN3-209ENST00000488016 NUDT7P0C024 238 aa12.17□□□□□ -0.46
NECTIN3-209ENST00000488016 PDE4AP27815 886 aa12.17□□□□□ -0.46
NECTIN3-209ENST00000488016 CRISPLD2Q9H0B8 497 aa12.17□□□□□ -0.46
NECTIN3-209ENST00000488016 ABCA6Q8N139 1617 aa12.17□□□□□ -0.46
NECTIN3-209ENST00000488016 PTPRMP28827 1452 aa12.16□□□□□ -0.46
NECTIN3-209ENST00000488016 MYT1LQ9UL68 1186 aa12.16□□□□□ -0.46
NECTIN3-209ENST00000488016 DIP2CQ9Y2E4 1556 aa12.15□□□□□ -0.46
NECTIN3-209ENST00000488016 MBD5Q9P267 1494 aa12.14□□□□□ -0.47
NECTIN3-209ENST00000488016 ARID4BQ4LE39 1312 aaPredicted RBP12.14□□□□□ -0.47
NECTIN3-209ENST00000488016 MYOM3Q5VTT5 1437 aa12.14□□□□□ -0.47
NECTIN3-209ENST00000488016 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.14□□□□□ -0.47
NECTIN3-209ENST00000488016 KIDINS220Q9ULH0 1771 aa12.14□□□□□ -0.47
NECTIN3-209ENST00000488016 TBC1D12O60347 775 aa12.13□□□□□ -0.47
NECTIN3-209ENST00000488016 MLECQ14165 292 aa12.13□□□□□ -0.47
NECTIN3-209ENST00000488016 PPP1R15BQ5SWA1 713 aa12.13□□□□□ -0.47
NECTIN3-209ENST00000488016 CERKQ8TCT0 537 aa12.13□□□□□ -0.47
NECTIN3-209ENST00000488016 PTCD2Q8WV60 388 aaKnown RBP12.13□□□□□ -0.47
NECTIN3-209ENST00000488016 KRTAP3-3Q9BYR6 98 aa12.13□□□□□ -0.47
NECTIN3-209ENST00000488016 KRTAP3-2Q9BYR7 98 aa12.13□□□□□ -0.47
NECTIN3-209ENST00000488016 NCKAP5LQ9HCH0 1330 aa12.12□□□□□ -0.47
NECTIN3-209ENST00000488016 KIAA1107Q9UPP5 1409 aa12.12□□□□□ -0.47
NECTIN3-209ENST00000488016 HSPA2P54652 639 aa12.12□□□□□ -0.47
NECTIN3-209ENST00000488016 ZNF687Q8N1G0 1237 aa12.12□□□□□ -0.47
NECTIN3-209ENST00000488016 MAGI2Q86UL8 1455 aa12.12□□□□□ -0.47
NECTIN3-209ENST00000488016 INO80Q9ULG1 1556 aaPredicted RBP12.11□□□□□ -0.47
NECTIN3-209ENST00000488016 PLEKHH2Q8IVE3 1493 aa12.11□□□□□ -0.47
NECTIN3-209ENST00000488016 MLH3Q9UHC1 1453 aa12.11□□□□□ -0.47
NECTIN3-209ENST00000488016 ATP7AQ04656 1500 aa12.11□□□□□ -0.47
NECTIN3-209ENST00000488016 C9orf84Q5VXU9 1444 aa12.11□□□□□ -0.47
NECTIN3-209ENST00000488016 SPAG9O60271 1321 aaKnown RBP12.11□□□□□ -0.47
NECTIN3-209ENST00000488016 ATP10AO60312 1499 aa12.1□□□□□ -0.47
NECTIN3-209ENST00000488016 LARP6Q9BRS8 491 aaKnown RBP12.1□□□□□ -0.47
NECTIN3-209ENST00000488016 BCORL1Q5H9F3 1711 aa12.1□□□□□ -0.47
NECTIN3-209ENST00000488016 MADDQ8WXG6 1647 aa12.1□□□□□ -0.47
NECTIN3-209ENST00000488016 ADAMTSL3P82987 1691 aa12.1□□□□□ -0.47
NECTIN3-209ENST00000488016 PTPN23Q9H3S7 1636 aa12.09□□□□□ -0.47
NECTIN3-209ENST00000488016 LHX6Q9UPM6 363 aa12.09□□□□□ -0.47
NECTIN3-209ENST00000488016 FGD6Q6ZV73 1430 aa12.09□□□□□ -0.47
NECTIN3-209ENST00000488016 CCDC141Q6ZP82 1450 aa12.08□□□□□ -0.47
NECTIN3-209ENST00000488016 SPNS2Q8IVW8 549 aa12.08□□□□□ -0.48
NECTIN3-209ENST00000488016 SPRYD3Q8NCJ5 442 aa12.08□□□□□ -0.48
NECTIN3-209ENST00000488016 DDX27Q96GQ7 796 aaKnown RBP12.08□□□□□ -0.48
NECTIN3-209ENST00000488016 RIMS1Q86UR5 1692 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms