RNA–Protein interactions for RNA: ENST00000487996.5

HLA-DMB-261, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-261ENST00000487996 DCAF11Q8TEB1 546 aa15.11■□□□□ 0.01
HLA-DMB-261ENST00000487996 TMEM131LA2VDJ0 1609 aa15.1■□□□□ 0.01
HLA-DMB-261ENST00000487996 ZNF326Q5BKZ1 582 aaKnown RBP15.1■□□□□ 0.01
HLA-DMB-261ENST00000487996 UHRF1BP1Q6BDS2 1440 aa15.08■□□□□ 0
HLA-DMB-261ENST00000487996 MYO3AQ8NEV4 1616 aa15.07■□□□□ 0
HLA-DMB-261ENST00000487996 MYOM2P54296 1465 aa15.07■□□□□ 0
HLA-DMB-261ENST00000487996 A2ML1A8K2U0 1454 aa15.07■□□□□ 0
HLA-DMB-261ENST00000487996 IFT172Q9UG01 1749 aa15.06■□□□□ 0
HLA-DMB-261ENST00000487996 MYO5BQ9ULV0 1848 aa15.06■□□□□ 0
HLA-DMB-261ENST00000487996 PPLO60437 1756 aa15.06■□□□□ 0
HLA-DMB-261ENST00000487996 HDGFP51858 240 aaKnown RBP15.06■□□□□ 0
HLA-DMB-261ENST00000487996 KDM2AQ9Y2K7 1162 aa15.06■□□□□ 0
HLA-DMB-261ENST00000487996 VGFO15240 615 aaPredicted RBP15.05■□□□□ -0
HLA-DMB-261ENST00000487996 UBR1Q8IWV7 1749 aa15.05■□□□□ -0
HLA-DMB-261ENST00000487996 PRAG1Q86YV5 1406 aa15.04■□□□□ -0
HLA-DMB-261ENST00000487996 NEXMIFQ5QGS0 1516 aa15.04■□□□□ -0
HLA-DMB-261ENST00000487996 CNKSR2Q8WXI2 1034 aa15.03■□□□□ -0
HLA-DMB-261ENST00000487996 ZNF142P52746 1687 aaPredicted RBP15.03■□□□□ -0
HLA-DMB-261ENST00000487996 ZFYVE9O95405 1425 aa15.03■□□□□ -0
HLA-DMB-261ENST00000487996 CEP170BQ9Y4F5 1589 aaPredicted RBP15.03■□□□□ -0
HLA-DMB-261ENST00000487996 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.03■□□□□ -0
HLA-DMB-261ENST00000487996 THEMISQ8N1K5 641 aaPredicted RBP15.02□□□□□ -0.01
HLA-DMB-261ENST00000487996 LMTK3Q96Q04 1460 aa15.01□□□□□ -0.01
HLA-DMB-261ENST00000487996 NRXN1Q9ULB1 1477 aa15.01□□□□□ -0.01
HLA-DMB-261ENST00000487996 TMEM2Q9UHN6 1383 aa15□□□□□ -0.01
HLA-DMB-261ENST00000487996 RALGAPBQ86X10 1494 aa15□□□□□ -0.01
HLA-DMB-261ENST00000487996 RIMS2Q9UQ26 1411 aa15□□□□□ -0.01
HLA-DMB-261ENST00000487996 NBPF8Q3BBV2 869 aa15□□□□□ -0.01
HLA-DMB-261ENST00000487996 KIAA1210Q9ULL0 1709 aa14.99□□□□□ -0.01
HLA-DMB-261ENST00000487996 TRPM1Q7Z4N2 1603 aa14.98□□□□□ -0.01
HLA-DMB-261ENST00000487996 SLIT1O75093 1534 aa14.98□□□□□ -0.01
HLA-DMB-261ENST00000487996 PIK3C2GO75747 1445 aa14.98□□□□□ -0.01
HLA-DMB-261ENST00000487996 EID1Q9Y6B2 187 aa14.97□□□□□ -0.01
HLA-DMB-261ENST00000487996 ROCK2O75116 1388 aaKnown RBP14.97□□□□□ -0.01
HLA-DMB-261ENST00000487996 LAMC1P11047 1609 aa14.97□□□□□ -0.01
HLA-DMB-261ENST00000487996 ADGRF5Q8IZF2 1346 aa14.96□□□□□ -0.01
HLA-DMB-261ENST00000487996 ARHGAP23Q9P227 1491 aa14.96□□□□□ -0.01
HLA-DMB-261ENST00000487996 HSPA2P54652 639 aa14.96□□□□□ -0.01
HLA-DMB-261ENST00000487996 HOXD11P31277 338 aaPredicted RBP14.95□□□□□ -0.02
HLA-DMB-261ENST00000487996 GPRASP1Q5JY77 1395 aa14.94□□□□□ -0.02
HLA-DMB-261ENST00000487996 CARD11Q9BXL7 1154 aa14.93□□□□□ -0.02
HLA-DMB-261ENST00000487996 NUTM2DQ5VT03 806 aaPredicted RBP14.92□□□□□ -0.02
HLA-DMB-261ENST00000487996 TXNDC2Q86VQ3 553 aa14.92□□□□□ -0.02
HLA-DMB-261ENST00000487996 C14orf93Q9H972 538 aaKnown RBP14.92□□□□□ -0.02
HLA-DMB-261ENST00000487996 SETBP1Q9Y6X0 1596 aa14.92□□□□□ -0.02
HLA-DMB-261ENST00000487996 SCAF11Q99590 1463 aaKnown RBP14.92□□□□□ -0.02
HLA-DMB-261ENST00000487996 EIF4G2P78344 907 aaKnown RBP eCLIP14.92□□□□□ -0.02
HLA-DMB-261ENST00000487996 PLEKHG1Q9ULL1 1385 aa14.91□□□□□ -0.02
HLA-DMB-261ENST00000487996 ANKLE2Q86XL3 938 aa14.91□□□□□ -0.02
HLA-DMB-261ENST00000487996 FBXO41Q8TF61 875 aa14.91□□□□□ -0.02
HLA-DMB-261ENST00000487996 CFAP70Q5T0N1 1121 aa14.89□□□□□ -0.03
HLA-DMB-261ENST00000487996 EIF3AQ14152 1382 aaKnown RBP14.88□□□□□ -0.03
HLA-DMB-261ENST00000487996 USP47Q96K76 1375 aa14.88□□□□□ -0.03
HLA-DMB-261ENST00000487996 LTKP29376 864 aa14.88□□□□□ -0.03
HLA-DMB-261ENST00000487996 NBPF1Q3BBV0 1214 aa14.88□□□□□ -0.03
HLA-DMB-261ENST00000487996 BCANQ96GW7 911 aa14.88□□□□□ -0.03
HLA-DMB-261ENST00000487996 ALKQ9UM73 1620 aa14.88□□□□□ -0.03
HLA-DMB-261ENST00000487996 DIP2AQ14689 1571 aa14.87□□□□□ -0.03
HLA-DMB-261ENST00000487996 RNF216Q9NWF9 866 aaPredicted RBP14.86□□□□□ -0.03
HLA-DMB-261ENST00000487996 POLR1AO95602 1720 aaPredicted RBP14.86□□□□□ -0.03
HLA-DMB-261ENST00000487996 ADGRB1O14514 1584 aa14.86□□□□□ -0.03
HLA-DMB-261ENST00000487996 IQGAP1P46940 1657 aa14.85□□□□□ -0.03
HLA-DMB-261ENST00000487996 NRXN3Q9Y4C0 1643 aa14.85□□□□□ -0.03
HLA-DMB-261ENST00000487996 ZNF316A6NFI3 1004 aaPredicted RBP14.84□□□□□ -0.03
HLA-DMB-261ENST00000487996 HSPA5P11021 654 aaKnown RBP14.83□□□□□ -0.03
HLA-DMB-261ENST00000487996 SETD1AO15047 1707 aaKnown RBP14.83□□□□□ -0.04
HLA-DMB-261ENST00000487996 MED14O60244 1454 aa14.83□□□□□ -0.04
HLA-DMB-261ENST00000487996 SLC24A1O60721 1099 aa14.83□□□□□ -0.04
HLA-DMB-261ENST00000487996 ADAMTS13Q76LX8 1427 aa14.82□□□□□ -0.04
HLA-DMB-261ENST00000487996 TBX22Q9Y458 520 aa14.82□□□□□ -0.04
HLA-DMB-261ENST00000487996 NPHP4O75161 1426 aaPredicted RBP14.81□□□□□ -0.04
HLA-DMB-261ENST00000487996 YTHDC2Q9H6S0 1430 aaKnown RBP14.81□□□□□ -0.04
HLA-DMB-261ENST00000487996 TMEM132EQ6IEE7 984 aa14.8□□□□□ -0.04
HLA-DMB-261ENST00000487996 PIK3R4Q99570 1358 aa14.8□□□□□ -0.04
HLA-DMB-261ENST00000487996 ASXL1Q8IXJ9 1541 aa14.8□□□□□ -0.04
HLA-DMB-261ENST00000487996 LRPPRCP42704 1394 aaKnown RBP14.79□□□□□ -0.04
HLA-DMB-261ENST00000487996 NCBP3Q53F19 620 aaKnown RBP14.79□□□□□ -0.04
HLA-DMB-261ENST00000487996 ST20-MTHFSA0A0A6YYL1 179 aa14.78□□□□□ -0.04
HLA-DMB-261ENST00000487996 ABCC11Q96J66 1382 aa14.78□□□□□ -0.04
HLA-DMB-261ENST00000487996 DLC1Q96QB1 1528 aa14.78□□□□□ -0.04
HLA-DMB-261ENST00000487996 SLC26A8Q96RN1 970 aa14.78□□□□□ -0.04
HLA-DMB-261ENST00000487996 TRAK1Q9UPV9 953 aa14.78□□□□□ -0.04
HLA-DMB-261ENST00000487996 KNDC1Q76NI1 1749 aa14.77□□□□□ -0.04
HLA-DMB-261ENST00000487996 METP08581 1390 aa14.77□□□□□ -0.05
HLA-DMB-261ENST00000487996 DCAF8L1A6NGE4 600 aa14.77□□□□□ -0.05
HLA-DMB-261ENST00000487996 ARHGEF28Q8N1W1 1705 aaKnown RBP14.77□□□□□ -0.05
HLA-DMB-261ENST00000487996 NCKAP5LQ9HCH0 1330 aa14.77□□□□□ -0.05
HLA-DMB-261ENST00000487996 TECPR2O15040 1411 aa14.76□□□□□ -0.05
HLA-DMB-261ENST00000487996 CENPJQ9HC77 1338 aaPredicted RBP14.76□□□□□ -0.05
HLA-DMB-261ENST00000487996 SBNO2Q9Y2G9 1366 aa14.76□□□□□ -0.05
HLA-DMB-261ENST00000487996 CERKQ8TCT0 537 aa14.75□□□□□ -0.05
HLA-DMB-261ENST00000487996 STK26Q9P289 416 aa14.75□□□□□ -0.05
HLA-DMB-261ENST00000487996 SIRT1Q96EB6 747 aa14.75□□□□□ -0.05
HLA-DMB-261ENST00000487996 HIRIP3Q9BW71 556 aaPredicted RBP14.75□□□□□ -0.05
HLA-DMB-261ENST00000487996 FAM135BQ49AJ0 1406 aa14.74□□□□□ -0.05
HLA-DMB-261ENST00000487996 CPS1P31327 1500 aa14.74□□□□□ -0.05
HLA-DMB-261ENST00000487996 TMF1P82094 1093 aa14.73□□□□□ -0.05
HLA-DMB-261ENST00000487996 CDCA8Q53HL2 280 aa14.73□□□□□ -0.05
HLA-DMB-261ENST00000487996 POGKQ9P215 609 aa14.73□□□□□ -0.05
HLA-DMB-261ENST00000487996 QRICH2Q9H0J4 1663 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms