RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.93□□□□□ -0.66
BRCA1-217ENST00000487825 APLP1P51693 650 aa10.93□□□□□ -0.66
BRCA1-217ENST00000487825 ITGBL1O95965 494 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-217ENST00000487825 NLRP7Q8WX94 980 aa10.92□□□□□ -0.66
BRCA1-217ENST00000487825 LMOD2Q6P5Q4 547 aa10.91□□□□□ -0.66
BRCA1-217ENST00000487825 KCNC4Q03721 635 aa10.9□□□□□ -0.66
BRCA1-217ENST00000487825 IFFO2Q5TF58 517 aa10.9□□□□□ -0.66
BRCA1-217ENST00000487825 NECTIN2Q92692 538 aa10.9□□□□□ -0.66
BRCA1-217ENST00000487825 PHOX2BQ99453 314 aa10.88□□□□□ -0.67
BRCA1-217ENST00000487825 MTRQ99707 1265 aa10.88□□□□□ -0.67
BRCA1-217ENST00000487825 TJAP1Q5JTD0 557 aa10.87□□□□□ -0.67
BRCA1-217ENST00000487825 MAP2K5Q13163 448 aa10.86□□□□□ -0.67
BRCA1-217ENST00000487825 A0A0G2JS52 829 aa10.85□□□□□ -0.67
BRCA1-217ENST00000487825 SLC24A1O60721 1099 aa10.85□□□□□ -0.67
BRCA1-217ENST00000487825 SLC10A3P09131 477 aa10.85□□□□□ -0.67
BRCA1-217ENST00000487825 IRF6O14896 467 aa10.84□□□□□ -0.67
BRCA1-217ENST00000487825 CFHP08603 1231 aa10.84□□□□□ -0.67
BRCA1-217ENST00000487825 COPS2P61201 443 aa10.84□□□□□ -0.67
BRCA1-217ENST00000487825 ZNF516Q92618 1163 aa10.84□□□□□ -0.67
BRCA1-217ENST00000487825 IL21Q9HBE4 155 aa10.83□□□□□ -0.68
BRCA1-217ENST00000487825 DAXXQ9UER7 740 aaPredicted RBP10.83□□□□□ -0.68
BRCA1-217ENST00000487825 PRR14Q9BWN1 585 aa10.82□□□□□ -0.68
BRCA1-217ENST00000487825 PCDHB3Q9Y5E6 796 aa10.82□□□□□ -0.68
BRCA1-217ENST00000487825 MINK1Q8N4C8 1332 aaPredicted RBP10.82□□□□□ -0.68
BRCA1-217ENST00000487825 DDX11L8A8MPP1 907 aa10.81□□□□□ -0.68
BRCA1-217ENST00000487825 KMT5BQ4FZB7 885 aa10.81□□□□□ -0.68
BRCA1-217ENST00000487825 RSPH4AQ5TD94 716 aa10.8□□□□□ -0.68
BRCA1-217ENST00000487825 RDH13Q8NBN7 331 aa10.8□□□□□ -0.68
BRCA1-217ENST00000487825 CCDC102AQ96A19 550 aa10.8□□□□□ -0.68
BRCA1-217ENST00000487825 KRI1Q8N9T8 703 aaKnown RBP10.79□□□□□ -0.68
BRCA1-217ENST00000487825 ZC3H15Q8WU90 426 aaKnown RBP10.79□□□□□ -0.68
BRCA1-217ENST00000487825 BLOC1S3Q6QNY0 202 aa10.78□□□□□ -0.68
BRCA1-217ENST00000487825 ACTN4O43707 911 aaKnown RBP10.77□□□□□ -0.69
BRCA1-217ENST00000487825 NKX2-3Q8TAU0 364 aa10.77□□□□□ -0.69
BRCA1-217ENST00000487825 MDM2Q00987 491 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-217ENST00000487825 ZPR1O75312 459 aa10.75□□□□□ -0.69
BRCA1-217ENST00000487825 ZMYND10O75800 440 aa10.75□□□□□ -0.69
BRCA1-217ENST00000487825 SULF1Q8IWU6 871 aa10.75□□□□□ -0.69
BRCA1-217ENST00000487825 BARGINQ6ZT62 677 aa10.74□□□□□ -0.69
BRCA1-217ENST00000487825 PUS10Q3MIT2 529 aaKnown RBP10.73□□□□□ -0.69
BRCA1-217ENST00000487825 TLL1O43897 1013 aa10.71□□□□□ -0.69
BRCA1-217ENST00000487825 PPP1R18Q6NYC8 613 aa10.71□□□□□ -0.69
BRCA1-217ENST00000487825 GCGRP47871 477 aa10.7□□□□□ -0.7
BRCA1-217ENST00000487825 NR1I2O75469 434 aa10.69□□□□□ -0.7
BRCA1-217ENST00000487825 FUT2Q10981 343 aa10.69□□□□□ -0.7
BRCA1-217ENST00000487825 RGS20O76081 388 aa10.68□□□□□ -0.7
BRCA1-217ENST00000487825 SCUBE3Q8IX30 993 aa10.67□□□□□ -0.7
BRCA1-217ENST00000487825 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.67□□□□□ -0.7
BRCA1-217ENST00000487825 CLCN1P35523 988 aa10.66□□□□□ -0.7
BRCA1-217ENST00000487825 BCANQ96GW7 911 aa10.66□□□□□ -0.7
BRCA1-217ENST00000487825 GPCPD1Q9NPB8 672 aa10.66□□□□□ -0.7
BRCA1-217ENST00000487825 CD46P15529 392 aa10.65□□□□□ -0.7
BRCA1-217ENST00000487825 ATP6V1AP38606 617 aa10.65□□□□□ -0.7
BRCA1-217ENST00000487825 RB1CC1Q8TDY2 1594 aa10.65□□□□□ -0.71
BRCA1-217ENST00000487825 MORN1Q5T089 497 aa10.64□□□□□ -0.71
BRCA1-217ENST00000487825 REPIN1Q9BWE0 567 aaKnown RBP10.64□□□□□ -0.71
BRCA1-217ENST00000487825 GGCXP38435 758 aa10.63□□□□□ -0.71
BRCA1-217ENST00000487825 FAM217BQ9NTX9 383 aaPredicted RBP10.63□□□□□ -0.71
BRCA1-217ENST00000487825 TTLL12Q14166 644 aaPredicted RBP10.62□□□□□ -0.71
BRCA1-217ENST00000487825 TMUB1Q9BVT8 246 aa10.62□□□□□ -0.71
BRCA1-217ENST00000487825 SLC27A5Q9Y2P5 690 aa10.62□□□□□ -0.71
BRCA1-217ENST00000487825 S1PR4O95977 384 aa10.61□□□□□ -0.71
BRCA1-217ENST00000487825 ADH1BP00325 375 aa10.61□□□□□ -0.71
BRCA1-217ENST00000487825 KDM4AO75164 1064 aa10.6□□□□□ -0.71
BRCA1-217ENST00000487825 SPSB2Q99619 263 aa10.6□□□□□ -0.71
BRCA1-217ENST00000487825 PRKD2Q9BZL6 878 aa10.6□□□□□ -0.71
BRCA1-217ENST00000487825 RNF223E7ERA6 249 aa10.59□□□□□ -0.71
BRCA1-217ENST00000487825 PPEF1O14829 653 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-217ENST00000487825 AMHR2Q16671 573 aa10.59□□□□□ -0.71
BRCA1-217ENST00000487825 GRIPAP1Q4V328 841 aa10.59□□□□□ -0.71
BRCA1-217ENST00000487825 AK7Q96M32 723 aa10.59□□□□□ -0.71
BRCA1-217ENST00000487825 TRIM66O15016 1216 aa10.58□□□□□ -0.72
BRCA1-217ENST00000487825 SSTR3P32745 418 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-217ENST00000487825 GIGYF2Q6Y7W6 1299 aaKnown RBP10.57□□□□□ -0.72
BRCA1-217ENST00000487825 HLA-CQ95604 372 aa10.57□□□□□ -0.72
BRCA1-217ENST00000487825 SLC6A16Q9GZN6 736 aa10.57□□□□□ -0.72
BRCA1-217ENST00000487825 SLC24A3Q9HC58 644 aa10.57□□□□□ -0.72
BRCA1-217ENST00000487825 THAP11Q96EK4 314 aa10.56□□□□□ -0.72
BRCA1-217ENST00000487825 FMNL1O95466 1100 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-217ENST00000487825 RNF19BQ6ZMZ0 732 aa10.54□□□□□ -0.72
BRCA1-217ENST00000487825 NUTM1Q86Y26 1132 aa10.54□□□□□ -0.72
BRCA1-217ENST00000487825 PARP9Q8IXQ6 854 aa10.54□□□□□ -0.72
BRCA1-217ENST00000487825 IRX2Q9BZI1 471 aaPredicted RBP10.54□□□□□ -0.72
BRCA1-217ENST00000487825 UNC13AQ9UPW8 1703 aa10.54□□□□□ -0.72
BRCA1-217ENST00000487825 USP46P62068 366 aa10.53□□□□□ -0.72
BRCA1-217ENST00000487825 GUCA2AQ02747 115 aa10.53□□□□□ -0.72
BRCA1-217ENST00000487825 BRICD5Q6PL45 260 aa10.53□□□□□ -0.72
BRCA1-217ENST00000487825 HOXA2O43364 376 aa10.52□□□□□ -0.73
BRCA1-217ENST00000487825 FAM160A2Q8N612 972 aaPredicted RBP10.52□□□□□ -0.73
BRCA1-217ENST00000487825 ANKLE1Q8NAG6 615 aa10.52□□□□□ -0.73
BRCA1-217ENST00000487825 SALL2Q9Y467 1007 aaPredicted RBP10.52□□□□□ -0.73
BRCA1-217ENST00000487825 V9GY48 417 aaPredicted RBP10.52□□□□□ -0.73
BRCA1-217ENST00000487825 Q3C1V9 767 aa10.51□□□□□ -0.73
BRCA1-217ENST00000487825 PRDM9Q9NQV7 894 aa10.51□□□□□ -0.73
BRCA1-217ENST00000487825 PDE4DQ08499 809 aa10.5□□□□□ -0.73
BRCA1-217ENST00000487825 SLC19A1P41440 591 aa10.49□□□□□ -0.73
BRCA1-217ENST00000487825 EMID1Q96A84 441 aaPredicted RBP10.49□□□□□ -0.73
BRCA1-217ENST00000487825 BEGAINQ9BUH8 593 aa10.49□□□□□ -0.73
BRCA1-217ENST00000487825 MS4A1P11836 297 aa10.48□□□□□ -0.73
BRCA1-217ENST00000487825 SPIRE2Q8WWL2 714 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms