RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 POTECB2RU33 542 aa10.9□□□□□ -0.66
UBR3-211ENST00000487689 DGAT1O75907 488 aa10.9□□□□□ -0.66
UBR3-211ENST00000487689 BLOC1S3Q6QNY0 202 aa10.9□□□□□ -0.66
UBR3-211ENST00000487689 NPDC1Q9NQX5 325 aaPredicted RBP10.9□□□□□ -0.66
UBR3-211ENST00000487689 SPRYD7Q5W111 196 aa10.89□□□□□ -0.67
UBR3-211ENST00000487689 PRR14Q9BWN1 585 aa10.89□□□□□ -0.67
UBR3-211ENST00000487689 TLL1O43897 1013 aa10.88□□□□□ -0.67
UBR3-211ENST00000487689 ZNF598Q86UK7 904 aaKnown RBP10.88□□□□□ -0.67
UBR3-211ENST00000487689 EYA1Q99502 592 aa10.87□□□□□ -0.67
UBR3-211ENST00000487689 PPEF1O14829 653 aaPredicted RBP10.86□□□□□ -0.67
UBR3-211ENST00000487689 PRR20EP86478 221 aa10.86□□□□□ -0.67
UBR3-211ENST00000487689 PRR20CP86479 221 aa10.86□□□□□ -0.67
UBR3-211ENST00000487689 PRR20DP86480 221 aa10.86□□□□□ -0.67
UBR3-211ENST00000487689 PRR20BP86481 221 aa10.86□□□□□ -0.67
UBR3-211ENST00000487689 PRR20AP86496 221 aa10.86□□□□□ -0.67
UBR3-211ENST00000487689 ANKLE1Q8NAG6 615 aa10.85□□□□□ -0.67
UBR3-211ENST00000487689 FAM187AA6NFU0 413 aa10.84□□□□□ -0.67
UBR3-211ENST00000487689 ZNF697Q5TEC3 545 aa10.84□□□□□ -0.67
UBR3-211ENST00000487689 LIAT1Q6ZQX7 453 aa10.84□□□□□ -0.67
UBR3-211ENST00000487689 TNFRSF10AO00220 468 aa10.82□□□□□ -0.68
UBR3-211ENST00000487689 S1PR4O95977 384 aa10.82□□□□□ -0.68
UBR3-211ENST00000487689 GDF9O60383 454 aa10.8□□□□□ -0.68
UBR3-211ENST00000487689 ST8SIA5O15466 376 aa10.78□□□□□ -0.68
UBR3-211ENST00000487689 DNAJB2P25686 324 aa10.78□□□□□ -0.68
UBR3-211ENST00000487689 TREML4Q6UXN2 200 aa10.77□□□□□ -0.69
UBR3-211ENST00000487689 ACTN4O43707 911 aaKnown RBP10.76□□□□□ -0.69
UBR3-211ENST00000487689 KMT5BQ4FZB7 885 aa10.76□□□□□ -0.69
UBR3-211ENST00000487689 AAASQ9NRG9 546 aa10.75□□□□□ -0.69
UBR3-211ENST00000487689 ADH1BP00325 375 aa10.74□□□□□ -0.69
UBR3-211ENST00000487689 TMEM134Q9H6X4 195 aa10.74□□□□□ -0.69
UBR3-211ENST00000487689 CFHP08603 1231 aa10.73□□□□□ -0.69
UBR3-211ENST00000487689 PLA2G2CQ5R387 149 aa10.73□□□□□ -0.69
UBR3-211ENST00000487689 LCE2AQ5TA79 106 aaPredicted RBP10.73□□□□□ -0.69
UBR3-211ENST00000487689 RBM46Q8TBY0 533 aaKnown RBP10.72□□□□□ -0.69
UBR3-211ENST00000487689 SLC6A16Q9GZN6 736 aa10.71□□□□□ -0.69
UBR3-211ENST00000487689 TSHZ2Q9NRE2 1034 aa10.7□□□□□ -0.7
UBR3-211ENST00000487689 NR1I2O75469 434 aa10.69□□□□□ -0.7
UBR3-211ENST00000487689 ADGRG1Q9Y653 693 aa10.69□□□□□ -0.7
UBR3-211ENST00000487689 RCCD1A6NED2 376 aa10.68□□□□□ -0.7
UBR3-211ENST00000487689 FOXC1Q12948 553 aa10.68□□□□□ -0.7
UBR3-211ENST00000487689 PKD2L1Q9P0L9 805 aa10.68□□□□□ -0.7
UBR3-211ENST00000487689 MLLT3P42568 568 aaPredicted RBP10.67□□□□□ -0.7
UBR3-211ENST00000487689 PTGDRQ13258 359 aa10.67□□□□□ -0.7
UBR3-211ENST00000487689 SLC10A3P09131 477 aa10.66□□□□□ -0.7
UBR3-211ENST00000487689 FAM161AQ3B820 660 aa10.66□□□□□ -0.7
UBR3-211ENST00000487689 DACH1Q9UI36 760 aa10.66□□□□□ -0.7
UBR3-211ENST00000487689 LMOD2Q6P5Q4 547 aa10.64□□□□□ -0.71
UBR3-211ENST00000487689 P3H3Q8IVL6 736 aa10.64□□□□□ -0.71
UBR3-211ENST00000487689 SCUBE3Q8IX30 993 aa10.63□□□□□ -0.71
UBR3-211ENST00000487689 CRIPAKQ8N1N5 446 aa10.63□□□□□ -0.71
UBR3-211ENST00000487689 ARHGEF1Q92888 912 aaKnown RBP10.63□□□□□ -0.71
UBR3-211ENST00000487689 WFS1O76024 890 aa10.62□□□□□ -0.71
UBR3-211ENST00000487689 PUS10Q3MIT2 529 aaKnown RBP10.61□□□□□ -0.71
UBR3-211ENST00000487689 SPSB2Q99619 263 aa10.61□□□□□ -0.71
UBR3-211ENST00000487689 GMPR2Q9P2T1 348 aaKnown RBP10.61□□□□□ -0.71
UBR3-211ENST00000487689 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.59□□□□□ -0.71
UBR3-211ENST00000487689 C11orf95C9JLR9 678 aaPredicted RBP10.59□□□□□ -0.71
UBR3-211ENST00000487689 AVPP01185 164 aa10.59□□□□□ -0.71
UBR3-211ENST00000487689 PLCB2Q00722 1185 aa10.59□□□□□ -0.71
UBR3-211ENST00000487689 TOR4AQ9NXH8 423 aa10.59□□□□□ -0.71
UBR3-211ENST00000487689 NUTM2FA1L443 756 aa10.58□□□□□ -0.72
UBR3-211ENST00000487689 AXIN1O15169 862 aa10.58□□□□□ -0.72
UBR3-211ENST00000487689 RPIAP49247 311 aa10.58□□□□□ -0.72
UBR3-211ENST00000487689 CYP4X1Q8N118 509 aa10.57□□□□□ -0.72
UBR3-211ENST00000487689 KCNV2Q8TDN2 545 aa10.55□□□□□ -0.72
UBR3-211ENST00000487689 STK17AQ9UEE5 414 aa10.55□□□□□ -0.72
UBR3-211ENST00000487689 CD2BP2O95400 341 aaKnown RBP10.54□□□□□ -0.72
UBR3-211ENST00000487689 NFX1Q12986 1120 aaKnown RBP10.54□□□□□ -0.72
UBR3-211ENST00000487689 CTC1Q2NKJ3 1217 aa10.54□□□□□ -0.72
UBR3-211ENST00000487689 FCF1Q9Y324 198 aaKnown RBP10.54□□□□□ -0.72
UBR3-211ENST00000487689 RSPH4AQ5TD94 716 aa10.52□□□□□ -0.73
UBR3-211ENST00000487689 PXYLP1Q8TE99 480 aa10.52□□□□□ -0.73
UBR3-211ENST00000487689 SMCPP49901 116 aaPredicted RBP10.51□□□□□ -0.73
UBR3-211ENST00000487689 HAP1P54257 671 aaPredicted RBP10.51□□□□□ -0.73
UBR3-211ENST00000487689 WIPF1O43516 503 aa10.5□□□□□ -0.73
UBR3-211ENST00000487689 FCHSD2O94868 740 aa10.5□□□□□ -0.73
UBR3-211ENST00000487689 OATP04181 439 aa10.49□□□□□ -0.73
UBR3-211ENST00000487689 INSM1Q01101 510 aaPredicted RBP10.49□□□□□ -0.73
UBR3-211ENST00000487689 MORN1Q5T089 497 aa10.48□□□□□ -0.73
UBR3-211ENST00000487689 THAP11Q96EK4 314 aa10.48□□□□□ -0.73
UBR3-211ENST00000487689 TTC24A2A3L6 582 aaPredicted RBP10.47□□□□□ -0.73
UBR3-211ENST00000487689 FAM160A2Q8N612 972 aaPredicted RBP10.47□□□□□ -0.73
UBR3-211ENST00000487689 PRDM9Q9NQV7 894 aa10.46□□□□□ -0.73
UBR3-211ENST00000487689 FUT2Q10981 343 aa10.45□□□□□ -0.74
UBR3-211ENST00000487689 SMYD5Q6GMV2 418 aa10.45□□□□□ -0.74
UBR3-211ENST00000487689 METTL3Q86U44 580 aaKnown RBP10.45□□□□□ -0.74
UBR3-211ENST00000487689 RDH13Q8NBN7 331 aa10.45□□□□□ -0.74
UBR3-211ENST00000487689 FMNL1O95466 1100 aaPredicted RBP10.44□□□□□ -0.74
UBR3-211ENST00000487689 SNRPBP14678 240 aaKnown RBP10.44□□□□□ -0.74
UBR3-211ENST00000487689 LCE2CQ5TA81 110 aa10.44□□□□□ -0.74
UBR3-211ENST00000487689 ZBTB24O43167 697 aaPredicted RBP10.43□□□□□ -0.74
UBR3-211ENST00000487689 ATP13A2Q9NQ11 1180 aa10.43□□□□□ -0.74
UBR3-211ENST00000487689 SLC27A5Q9Y2P5 690 aa10.43□□□□□ -0.74
UBR3-211ENST00000487689 SMPD1P17405 629 aa10.42□□□□□ -0.74
UBR3-211ENST00000487689 ATP6V1AP38606 617 aa10.42□□□□□ -0.74
UBR3-211ENST00000487689 TERTO14746 1132 aaKnown RBP10.41□□□□□ -0.74
UBR3-211ENST00000487689 SNIP1Q8TAD8 396 aaKnown RBP10.4□□□□□ -0.74
UBR3-211ENST00000487689 DDX11L8A8MPP1 907 aa10.39□□□□□ -0.75
UBR3-211ENST00000487689 WNT7AO00755 349 aa10.39□□□□□ -0.75
UBR3-211ENST00000487689 BRICD5Q6PL45 260 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms