RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 PREX1Q8TCU6 1659 aa28.21■■■□□ 2.11
PHF1-209ENST00000487667 CFAP65Q6ZU64 1925 aaKnown RBP28.21■■■□□ 2.11
PHF1-209ENST00000487667 SLC24A1O60721 1099 aa28.18■■■□□ 2.1
PHF1-209ENST00000487667 CHGAP10645 457 aaKnown RBP28.17■■■□□ 2.1
PHF1-209ENST00000487667 SCAF11Q99590 1463 aaKnown RBP28.17■■■□□ 2.1
PHF1-209ENST00000487667 EIF3AQ14152 1382 aaKnown RBP28.17■■■□□ 2.1
PHF1-209ENST00000487667 PPLO60437 1756 aa28.16■■■□□ 2.1
PHF1-209ENST00000487667 IQGAP1P46940 1657 aa28.16■■■□□ 2.1
PHF1-209ENST00000487667 ERVK-7P63135 1459 aa28.13■■■□□ 2.09
PHF1-209ENST00000487667 ESF1Q9H501 851 aaKnown RBP28.12■■■□□ 2.09
PHF1-209ENST00000487667 CLTCQ00610 1675 aaKnown RBP28.12■■■□□ 2.09
PHF1-209ENST00000487667 YTHDC1Q96MU7 727 aaKnown RBP28.12■■■□□ 2.09
PHF1-209ENST00000487667 VGFO15240 615 aaPredicted RBP28.11■■■□□ 2.09
PHF1-209ENST00000487667 SETBP1Q9Y6X0 1596 aa28.11■■■□□ 2.09
PHF1-209ENST00000487667 ADGRF5Q8IZF2 1346 aa28.1■■■□□ 2.09
PHF1-209ENST00000487667 TMF1P82094 1093 aa28.1■■■□□ 2.09
PHF1-209ENST00000487667 ZFYVE9O95405 1425 aa28.09■■■□□ 2.09
PHF1-209ENST00000487667 IDI1Q13907 227 aa28.09■■■□□ 2.09
PHF1-209ENST00000487667 PIK3C2GO75747 1445 aa28.08■■■□□ 2.09
PHF1-209ENST00000487667 SPATA31D1Q6ZQQ2 1576 aa28.08■■■□□ 2.09
PHF1-209ENST00000487667 TESK2Q96S53 571 aa28.08■■■□□ 2.09
PHF1-209ENST00000487667 CDCA8Q53HL2 280 aa28.06■■■□□ 2.08
PHF1-209ENST00000487667 NEXMIFQ5QGS0 1516 aa28.05■■■□□ 2.08
PHF1-209ENST00000487667 TMEM131LA2VDJ0 1609 aa28.04■■■□□ 2.08
PHF1-209ENST00000487667 POLR3GLQ9BT43 218 aa28.04■■■□□ 2.08
PHF1-209ENST00000487667 C14orf93Q9H972 538 aaKnown RBP28.03■■■□□ 2.08
PHF1-209ENST00000487667 CFAP70Q5T0N1 1121 aa28.02■■■□□ 2.08
PHF1-209ENST00000487667 PRKRIP1Q9H875 184 aaPredicted RBP28.02■■■□□ 2.08
PHF1-209ENST00000487667 FBXO31Q5XUX0 539 aaPredicted RBP28■■■□□ 2.07
PHF1-209ENST00000487667 ZMYM3Q14202 1370 aa27.98■■■□□ 2.07
PHF1-209ENST00000487667 KTN1Q86UP2 1357 aaKnown RBP27.98■■■□□ 2.07
PHF1-209ENST00000487667 DISP3Q9P2K9 1392 aa27.94■■■□□ 2.06
PHF1-209ENST00000487667 SBNO2Q9Y2G9 1366 aa27.94■■■□□ 2.06
PHF1-209ENST00000487667 STAG3Q9UJ98 1225 aa27.94■■■□□ 2.06
PHF1-209ENST00000487667 MYO3AQ8NEV4 1616 aa27.94■■■□□ 2.06
PHF1-209ENST00000487667 ADGRB1O14514 1584 aa27.92■■■□□ 2.06
PHF1-209ENST00000487667 MYO5BQ9ULV0 1848 aa27.9■■■□□ 2.06
PHF1-209ENST00000487667 A2ML1A8K2U0 1454 aa27.87■■■□□ 2.05
PHF1-209ENST00000487667 KDM5AP29375 1690 aaKnown RBP27.87■■■□□ 2.05
PHF1-209ENST00000487667 CEBPAP49715 358 aaPredicted RBP27.86■■■□□ 2.05
PHF1-209ENST00000487667 TNRQ92752 1358 aa27.85■■■□□ 2.05
PHF1-209ENST00000487667 CENPJQ9HC77 1338 aaPredicted RBP27.85■■■□□ 2.05
PHF1-209ENST00000487667 HDGFP51858 240 aaKnown RBP27.84■■■□□ 2.05
PHF1-209ENST00000487667 RALBP1Q15311 655 aa27.84■■■□□ 2.05
PHF1-209ENST00000487667 PLPPR3Q6T4P5 718 aa27.84■■■□□ 2.05
PHF1-209ENST00000487667 GTF3C3Q9Y5Q9 886 aa27.84■■■□□ 2.05
PHF1-209ENST00000487667 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.83■■■□□ 2.05
PHF1-209ENST00000487667 FER1L4A9Z1Z3 1794 aa27.82■■■□□ 2.04
PHF1-209ENST00000487667 RIMS2Q9UQ26 1411 aa27.79■■■□□ 2.04
PHF1-209ENST00000487667 NLRP1Q9C000 1473 aa27.78■■■□□ 2.04
PHF1-209ENST00000487667 PER1O15534 1290 aaPredicted RBP27.77■■■□□ 2.04
PHF1-209ENST00000487667 MRS2Q9HD23 443 aa27.77■■■□□ 2.04
PHF1-209ENST00000487667 NUTM2DQ5VT03 806 aaPredicted RBP27.76■■■□□ 2.03
PHF1-209ENST00000487667 PUS7Q96PZ0 661 aaKnown RBP27.76■■■□□ 2.03
PHF1-209ENST00000487667 TRAK1Q9UPV9 953 aa27.76■■■□□ 2.03
PHF1-209ENST00000487667 PANK3Q9H999 370 aa27.75■■■□□ 2.03
PHF1-209ENST00000487667 TMEM132EQ6IEE7 984 aa27.75■■■□□ 2.03
PHF1-209ENST00000487667 QRICH2Q9H0J4 1663 aa27.74■■■□□ 2.03
PHF1-209ENST00000487667 ALKQ9UM73 1620 aa27.72■■■□□ 2.03
PHF1-209ENST00000487667 C3P01024 1663 aa27.72■■■□□ 2.03
PHF1-209ENST00000487667 PELP1Q8IZL8 1130 aaKnown RBP27.72■■■□□ 2.03
PHF1-209ENST00000487667 ARHGEF28Q8N1W1 1705 aaKnown RBP27.72■■■□□ 2.03
PHF1-209ENST00000487667 MYBBP1AQ9BQG0 1328 aaKnown RBP27.72■■■□□ 2.03
PHF1-209ENST00000487667 ADAMTSL3P82987 1691 aa27.71■■■□□ 2.03
PHF1-209ENST00000487667 PARD3Q8TEW0 1356 aa27.7■■■□□ 2.02
PHF1-209ENST00000487667 RIMS1Q86UR5 1692 aaKnown RBP27.69■■■□□ 2.02
PHF1-209ENST00000487667 BRD4O60885 1362 aaPredicted RBP27.69■■■□□ 2.02
PHF1-209ENST00000487667 KNSTRNQ9Y448 316 aa27.68■■■□□ 2.02
PHF1-209ENST00000487667 ASXL1Q8IXJ9 1541 aa27.68■■■□□ 2.02
PHF1-209ENST00000487667 YTHDC2Q9H6S0 1430 aaKnown RBP27.68■■■□□ 2.02
PHF1-209ENST00000487667 UBR1Q8IWV7 1749 aa27.67■■■□□ 2.02
PHF1-209ENST00000487667 MYOM1P52179 1685 aa27.67■■■□□ 2.02
PHF1-209ENST00000487667 NPC1L1Q9UHC9 1359 aa27.66■■■□□ 2.02
PHF1-209ENST00000487667 EVC2Q86UK5 1308 aa27.65■■■□□ 2.02
PHF1-209ENST00000487667 TMEM2Q9UHN6 1383 aa27.65■■■□□ 2.02
PHF1-209ENST00000487667 DLC1Q96QB1 1528 aa27.63■■■□□ 2.01
PHF1-209ENST00000487667 NLRP13Q86W25 1043 aa27.63■■■□□ 2.01
PHF1-209ENST00000487667 TMC1Q8TDI8 760 aa27.63■■■□□ 2.01
PHF1-209ENST00000487667 CCDC184Q52MB2 194 aa27.61■■■□□ 2.01
PHF1-209ENST00000487667 PTPRMP28827 1452 aa27.6■■■□□ 2.01
PHF1-209ENST00000487667 LRPPRCP42704 1394 aaKnown RBP27.59■■■□□ 2.01
PHF1-209ENST00000487667 SETD1AO15047 1707 aaKnown RBP27.58■■■□□ 2.01
PHF1-209ENST00000487667 NINLQ9Y2I6 1382 aa27.58■■■□□ 2.01
PHF1-209ENST00000487667 ABCC11Q96J66 1382 aa27.57■■■□□ 2
PHF1-209ENST00000487667 HNRNPUQ00839 825 aaKnown RBP eCLIP27.56■■■□□ 2
PHF1-209ENST00000487667 FAM9BQ8IZU0 186 aa27.56■■■□□ 2
PHF1-209ENST00000487667 POGKQ9P215 609 aa27.56■■■□□ 2
PHF1-209ENST00000487667 STK26Q9P289 416 aa27.56■■■□□ 2
PHF1-209ENST00000487667 NRXN3Q9Y4C0 1643 aa27.54■■■□□ 2
PHF1-209ENST00000487667 CNGB1Q14028 1251 aaPredicted RBP27.54■■■□□ 2
PHF1-209ENST00000487667 AMER1Q5JTC6 1135 aaPredicted RBP27.53■■■□□ 2
PHF1-209ENST00000487667 SIRT1Q96EB6 747 aa27.53■■■□□ 2
PHF1-209ENST00000487667 SENP3Q9H4L4 574 aaPredicted RBP27.53■■■□□ 2
PHF1-209ENST00000487667 SLIT1O75093 1534 aa27.53■■■□□ 2
PHF1-209ENST00000487667 TULP4Q9NRJ4 1543 aa27.53■■■□□ 2
PHF1-209ENST00000487667 CC2D1BQ5T0F9 858 aaKnown RBP27.53■■■□□ 2
PHF1-209ENST00000487667 EID1Q9Y6B2 187 aa27.53■■■□□ 2
PHF1-209ENST00000487667 PLEKHG1Q9ULL1 1385 aa27.52■■■□□ 2
PHF1-209ENST00000487667 THEMISQ8N1K5 641 aaPredicted RBP27.51■■■□□ 2
PHF1-209ENST00000487667 PNISRQ8TF01 805 aaKnown RBP27.51■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms