RNA–Protein interactions for RNA: ENST00000487620.1

ZNF3-215, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 2,660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-215ENST00000487620 AMER1Q5JTC6 1135 aaPredicted RBP12.77□□□□□ -0.37
ZNF3-215ENST00000487620 ATP10AO60312 1499 aa12.76□□□□□ -0.37
ZNF3-215ENST00000487620 FAM161AQ3B820 660 aa12.76□□□□□ -0.37
ZNF3-215ENST00000487620 IQGAP1P46940 1657 aa12.75□□□□□ -0.37
ZNF3-215ENST00000487620 ZNF521Q96K83 1311 aa12.75□□□□□ -0.37
ZNF3-215ENST00000487620 MADDQ8WXG6 1647 aa12.75□□□□□ -0.37
ZNF3-215ENST00000487620 NFKBIBQ15653 356 aa12.75□□□□□ -0.37
ZNF3-215ENST00000487620 C8orf34Q49A92 452 aa12.75□□□□□ -0.37
ZNF3-215ENST00000487620 CDCA8Q53HL2 280 aa12.75□□□□□ -0.37
ZNF3-215ENST00000487620 SLFN5Q08AF3 891 aa12.74□□□□□ -0.37
ZNF3-215ENST00000487620 SYNMO15061 1565 aa12.73□□□□□ -0.37
ZNF3-215ENST00000487620 ASXL1Q8IXJ9 1541 aa12.73□□□□□ -0.37
ZNF3-215ENST00000487620 APAF1O14727 1248 aa12.72□□□□□ -0.37
ZNF3-215ENST00000487620 SPINK5Q9NQ38 1064 aaPredicted RBP12.72□□□□□ -0.37
ZNF3-215ENST00000487620 GSE1Q14687 1217 aa12.72□□□□□ -0.37
ZNF3-215ENST00000487620 SCAF11Q99590 1463 aaKnown RBP12.71□□□□□ -0.37
ZNF3-215ENST00000487620 BCAR3O75815 825 aa12.71□□□□□ -0.37
ZNF3-215ENST00000487620 SPHKAPQ2M3C7 1700 aa12.71□□□□□ -0.37
ZNF3-215ENST00000487620 MYOM1P52179 1685 aa12.71□□□□□ -0.38
ZNF3-215ENST00000487620 PIK3C2GO75747 1445 aa12.7□□□□□ -0.38
ZNF3-215ENST00000487620 CLASP1Q7Z460 1538 aa12.7□□□□□ -0.38
ZNF3-215ENST00000487620 NKTRP30414 1462 aaKnown RBP12.69□□□□□ -0.38
ZNF3-215ENST00000487620 CHD1O14646 1710 aa12.69□□□□□ -0.38
ZNF3-215ENST00000487620 CEP152O94986 1710 aa12.69□□□□□ -0.38
ZNF3-215ENST00000487620 ANO8Q9HCE9 1232 aaPredicted RBP12.69□□□□□ -0.38
ZNF3-215ENST00000487620 EFCAB2Q5VUJ9 269 aa12.69□□□□□ -0.38
ZNF3-215ENST00000487620 KDM5AP29375 1690 aaKnown RBP12.68□□□□□ -0.38
ZNF3-215ENST00000487620 TRAPPC8Q9Y2L5 1435 aa12.68□□□□□ -0.38
ZNF3-215ENST00000487620 TRMT2AQ8IZ69 625 aaKnown RBP12.68□□□□□ -0.38
ZNF3-215ENST00000487620 EIF3AQ14152 1382 aaKnown RBP12.68□□□□□ -0.38
ZNF3-215ENST00000487620 CLTCL1P53675 1640 aa12.67□□□□□ -0.38
ZNF3-215ENST00000487620 BRPF3Q9ULD4 1205 aa12.67□□□□□ -0.38
ZNF3-215ENST00000487620 TRPM2O94759 1503 aa12.67□□□□□ -0.38
ZNF3-215ENST00000487620 ABCC2Q92887 1545 aa12.67□□□□□ -0.38
ZNF3-215ENST00000487620 PLCH2O75038 1416 aa12.67□□□□□ -0.38
ZNF3-215ENST00000487620 FRAT1Q92837 279 aaPredicted RBP12.67□□□□□ -0.38
ZNF3-215ENST00000487620 E9PSI1 815 aa12.66□□□□□ -0.38
ZNF3-215ENST00000487620 DMRT2Q9Y5R5 561 aa12.66□□□□□ -0.38
ZNF3-215ENST00000487620 ERCC6L2Q5T890 1561 aa12.66□□□□□ -0.38
ZNF3-215ENST00000487620 SCAPERQ9BY12 1400 aa12.66□□□□□ -0.38
ZNF3-215ENST00000487620 CANXP27824 592 aaKnown RBP12.66□□□□□ -0.38
ZNF3-215ENST00000487620 SPAG9O60271 1321 aaKnown RBP12.66□□□□□ -0.38
ZNF3-215ENST00000487620 ABCC1P33527 1531 aa12.66□□□□□ -0.38
ZNF3-215ENST00000487620 IGHDP01880 384 aa12.65□□□□□ -0.38
ZNF3-215ENST00000487620 AFAP1Q8N556 730 aa12.65□□□□□ -0.38
ZNF3-215ENST00000487620 FRAT2O75474 233 aaPredicted RBP12.65□□□□□ -0.38
ZNF3-215ENST00000487620 NPC1L1Q9UHC9 1359 aa12.65□□□□□ -0.38
ZNF3-215ENST00000487620 VIRMAQ69YN4 1812 aaKnown RBP12.64□□□□□ -0.39
ZNF3-215ENST00000487620 CFAP70Q5T0N1 1121 aa12.64□□□□□ -0.39
ZNF3-215ENST00000487620 STAC3Q96MF2 364 aa12.64□□□□□ -0.39
ZNF3-215ENST00000487620 COG6Q9Y2V7 657 aa12.63□□□□□ -0.39
ZNF3-215ENST00000487620 CENPJQ9HC77 1338 aaPredicted RBP12.63□□□□□ -0.39
ZNF3-215ENST00000487620 NEUROD2Q15784 382 aa12.63□□□□□ -0.39
ZNF3-215ENST00000487620 PANK1Q8TE04 598 aa12.63□□□□□ -0.39
ZNF3-215ENST00000487620 CARD14Q9BXL6 1004 aa12.63□□□□□ -0.39
ZNF3-215ENST00000487620 SHROOM2Q13796 1616 aa12.63□□□□□ -0.39
ZNF3-215ENST00000487620 ZCCHC11Q5TAX3 1644 aaKnown RBP12.62□□□□□ -0.39
ZNF3-215ENST00000487620 PTPRTO14522 1441 aa12.62□□□□□ -0.39
ZNF3-215ENST00000487620 CGNL1Q0VF96 1302 aa12.62□□□□□ -0.39
ZNF3-215ENST00000487620 TNNT2P45379 298 aaPredicted RBP12.61□□□□□ -0.39
ZNF3-215ENST00000487620 CLUAP1Q96AJ1 413 aa12.61□□□□□ -0.39
ZNF3-215ENST00000487620 ERVK-7P63135 1459 aa12.61□□□□□ -0.39
ZNF3-215ENST00000487620 TET3O43151 1660 aa12.6□□□□□ -0.39
ZNF3-215ENST00000487620 PDE3AQ14432 1141 aa12.6□□□□□ -0.39
ZNF3-215ENST00000487620 WWC1Q8IX03 1113 aa12.6□□□□□ -0.39
ZNF3-215ENST00000487620 KANK1Q14678 1352 aa12.6□□□□□ -0.39
ZNF3-215ENST00000487620 ZFYVE16Q7Z3T8 1539 aa12.6□□□□□ -0.39
ZNF3-215ENST00000487620 KIAA1210Q9ULL0 1709 aa12.6□□□□□ -0.39
ZNF3-215ENST00000487620 ADGRF5Q8IZF2 1346 aa12.59□□□□□ -0.39
ZNF3-215ENST00000487620 KIF3BO15066 747 aa12.59□□□□□ -0.39
ZNF3-215ENST00000487620 SEC24BO95487 1268 aa12.59□□□□□ -0.39
ZNF3-215ENST00000487620 RRP7AQ9Y3A4 280 aaKnown RBP12.59□□□□□ -0.39
ZNF3-215ENST00000487620 UGGT1Q9NYU2 1555 aa12.59□□□□□ -0.39
ZNF3-215ENST00000487620 ABCA6Q8N139 1617 aa12.58□□□□□ -0.39
ZNF3-215ENST00000487620 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.58□□□□□ -0.4
ZNF3-215ENST00000487620 USP19O94966 1318 aa12.58□□□□□ -0.4
ZNF3-215ENST00000487620 DEPDC5O75140 1603 aa12.58□□□□□ -0.4
ZNF3-215ENST00000487620 NGEFQ8N5V2 710 aa12.58□□□□□ -0.4
ZNF3-215ENST00000487620 MAP3K4Q9Y6R4 1608 aa12.58□□□□□ -0.4
ZNF3-215ENST00000487620 MAPK8IP3Q9UPT6 1336 aa12.58□□□□□ -0.4
ZNF3-215ENST00000487620 SLC24A1O60721 1099 aa12.57□□□□□ -0.4
ZNF3-215ENST00000487620 RTEL1-TNFRSF6BF6WH68 1400 aa12.57□□□□□ -0.4
ZNF3-215ENST00000487620 MORC1Q86VD1 984 aa12.56□□□□□ -0.4
ZNF3-215ENST00000487620 SLKQ9H2G2 1235 aaPredicted RBP12.56□□□□□ -0.4
ZNF3-215ENST00000487620 KIF1BO60333 1816 aa12.56□□□□□ -0.4
ZNF3-215ENST00000487620 NINLQ9Y2I6 1382 aa12.56□□□□□ -0.4
ZNF3-215ENST00000487620 BCL2L13Q9BXK5 485 aa12.56□□□□□ -0.4
ZNF3-215ENST00000487620 POLR3AO14802 1390 aaPredicted RBP12.56□□□□□ -0.4
ZNF3-215ENST00000487620 BECN1Q14457 450 aa12.55□□□□□ -0.4
ZNF3-215ENST00000487620 CHGAP10645 457 aaKnown RBP12.55□□□□□ -0.4
ZNF3-215ENST00000487620 TNNQ9UQP3 1299 aa12.55□□□□□ -0.4
ZNF3-215ENST00000487620 NSD3Q9BZ95 1437 aa12.54□□□□□ -0.4
ZNF3-215ENST00000487620 ATP7AQ04656 1500 aa12.54□□□□□ -0.4
ZNF3-215ENST00000487620 RARSP54136 660 aaKnown RBP12.54□□□□□ -0.4
ZNF3-215ENST00000487620 TCP11L2Q8N4U5 519 aa12.54□□□□□ -0.4
ZNF3-215ENST00000487620 RUNDC1Q96C34 613 aa12.54□□□□□ -0.4
ZNF3-215ENST00000487620 SHPRHQ149N8 1683 aa12.54□□□□□ -0.4
ZNF3-215ENST00000487620 MYOM2P54296 1465 aa12.53□□□□□ -0.4
ZNF3-215ENST00000487620 RLBP1P12271 317 aa12.53□□□□□ -0.4
ZNF3-215ENST00000487620 PMFBP1Q8TBY8 1022 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms