RNA–Protein interactions for RNA: ENST00000487485.1

TOP3B-216, Transcript of DNA topoisomerase III beta, humanhuman

TSL 3

Gene TOP3B, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-216ENST00000487485 PROSER2Q86WR7 435 aaPredicted RBP15.95■□□□□ 0.14
TOP3B-216ENST00000487485 SLC26A8Q96RN1 970 aa15.95■□□□□ 0.14
TOP3B-216ENST00000487485 NUP155O75694 1391 aa15.92■□□□□ 0.14
TOP3B-216ENST00000487485 PIK3C2BO00750 1634 aa15.91■□□□□ 0.14
TOP3B-216ENST00000487485 TRIM52Q96A61 297 aa15.91■□□□□ 0.14
TOP3B-216ENST00000487485 IQGAP3Q86VI3 1631 aa15.9■□□□□ 0.14
TOP3B-216ENST00000487485 RAB3GAP2Q9H2M9 1393 aa15.9■□□□□ 0.14
TOP3B-216ENST00000487485 LMTK2Q8IWU2 1503 aa15.89■□□□□ 0.13
TOP3B-216ENST00000487485 ROBO1Q9Y6N7 1651 aa15.89■□□□□ 0.13
TOP3B-216ENST00000487485 SLAIN2Q9P270 581 aa15.88■□□□□ 0.13
TOP3B-216ENST00000487485 TET3O43151 1660 aa15.88■□□□□ 0.13
TOP3B-216ENST00000487485 EFCAB6Q5THR3 1501 aa15.87■□□□□ 0.13
TOP3B-216ENST00000487485 ACIN1Q9UKV3 1341 aaKnown RBP15.87■□□□□ 0.13
TOP3B-216ENST00000487485 HRCP23327 699 aa15.86■□□□□ 0.13
TOP3B-216ENST00000487485 BCANQ96GW7 911 aa15.86■□□□□ 0.13
TOP3B-216ENST00000487485 PCGF6Q9BYE7 350 aa15.84■□□□□ 0.13
TOP3B-216ENST00000487485 MSH6P52701 1360 aa15.84■□□□□ 0.13
TOP3B-216ENST00000487485 E9PCH4 1651 aa15.83■□□□□ 0.13
TOP3B-216ENST00000487485 SLC4A1APQ9BWU0 796 aaKnown RBP15.82■□□□□ 0.12
TOP3B-216ENST00000487485 JCADQ9P266 1359 aa15.82■□□□□ 0.12
TOP3B-216ENST00000487485 NOS1P29475 1434 aa15.82■□□□□ 0.12
TOP3B-216ENST00000487485 SETD1AO15047 1707 aaKnown RBP15.81■□□□□ 0.12
TOP3B-216ENST00000487485 KDM5AP29375 1690 aaKnown RBP15.81■□□□□ 0.12
TOP3B-216ENST00000487485 SLC52A1Q9NWF4 448 aa15.81■□□□□ 0.12
TOP3B-216ENST00000487485 NKTRP30414 1462 aaKnown RBP15.8■□□□□ 0.12
TOP3B-216ENST00000487485 MPHOSPH9Q99550 1183 aa15.8■□□□□ 0.12
TOP3B-216ENST00000487485 PHLPP1O60346 1717 aa15.8■□□□□ 0.12
TOP3B-216ENST00000487485 RPRD2Q5VT52 1461 aaKnown RBP15.79■□□□□ 0.12
TOP3B-216ENST00000487485 NWD1Q149M9 1564 aa15.79■□□□□ 0.12
TOP3B-216ENST00000487485 UPF1Q92900 1129 aaKnown RBP eCLIP15.77■□□□□ 0.12
TOP3B-216ENST00000487485 ADGRB3O60242 1522 aa15.77■□□□□ 0.11
TOP3B-216ENST00000487485 PLEKHG1Q9ULL1 1385 aa15.75■□□□□ 0.11
TOP3B-216ENST00000487485 CHD2O14647 1828 aaKnown RBP15.75■□□□□ 0.11
TOP3B-216ENST00000487485 SPHKAPQ2M3C7 1700 aa15.75■□□□□ 0.11
TOP3B-216ENST00000487485 PPP1R15AO75807 674 aaPredicted RBP15.75■□□□□ 0.11
TOP3B-216ENST00000487485 MEX3CQ5U5Q3 659 aaKnown RBP15.75■□□□□ 0.11
TOP3B-216ENST00000487485 TBX22Q9Y458 520 aa15.75■□□□□ 0.11
TOP3B-216ENST00000487485 ZFYVE9O95405 1425 aa15.75■□□□□ 0.11
TOP3B-216ENST00000487485 LRP6O75581 1613 aa15.75■□□□□ 0.11
TOP3B-216ENST00000487485 HDGFP51858 240 aaKnown RBP15.74■□□□□ 0.11
TOP3B-216ENST00000487485 FOXD1Q16676 465 aa15.74■□□□□ 0.11
TOP3B-216ENST00000487485 C14orf37Q86TY3 774 aa15.74■□□□□ 0.11
TOP3B-216ENST00000487485 RIMS2Q9UQ26 1411 aa15.74■□□□□ 0.11
TOP3B-216ENST00000487485 MYO5BQ9ULV0 1848 aa15.73■□□□□ 0.11
TOP3B-216ENST00000487485 SPATA31A6Q5VVP1 1343 aa15.73■□□□□ 0.11
TOP3B-216ENST00000487485 COL16A1Q07092 1604 aaPredicted RBP15.73■□□□□ 0.11
TOP3B-216ENST00000487485 NUTM2DQ5VT03 806 aaPredicted RBP15.73■□□□□ 0.11
TOP3B-216ENST00000487485 ZNF772Q68DY9 489 aaPredicted RBP15.73■□□□□ 0.11
TOP3B-216ENST00000487485 CHGAP10645 457 aaKnown RBP15.72■□□□□ 0.11
TOP3B-216ENST00000487485 CADPS2Q86UW7 1296 aa15.71■□□□□ 0.11
TOP3B-216ENST00000487485 C19orf44Q9H6X5 657 aa15.71■□□□□ 0.11
TOP3B-216ENST00000487485 NCOA3Q9Y6Q9 1424 aa15.7■□□□□ 0.1
TOP3B-216ENST00000487485 ATF3P18847 181 aa15.69■□□□□ 0.1
TOP3B-216ENST00000487485 RXRBP28702 533 aa15.69■□□□□ 0.1
TOP3B-216ENST00000487485 ADAMTS13Q76LX8 1427 aa15.68■□□□□ 0.1
TOP3B-216ENST00000487485 TRPM2O94759 1503 aa15.68■□□□□ 0.1
TOP3B-216ENST00000487485 NUTM2BA6NNL0 878 aaPredicted RBP15.68■□□□□ 0.1
TOP3B-216ENST00000487485 NUTM2EB1AL46 878 aaPredicted RBP15.68■□□□□ 0.1
TOP3B-216ENST00000487485 NUTM2AQ8IVF1 878 aaPredicted RBP15.68■□□□□ 0.1
TOP3B-216ENST00000487485 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.68■□□□□ 0.1
TOP3B-216ENST00000487485 TMEM131LA2VDJ0 1609 aa15.68■□□□□ 0.1
TOP3B-216ENST00000487485 BRINP3Q76B58 766 aa15.67■□□□□ 0.1
TOP3B-216ENST00000487485 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.67■□□□□ 0.1
TOP3B-216ENST00000487485 AMOTL2Q9Y2J4 779 aa15.66■□□□□ 0.1
TOP3B-216ENST00000487485 KIF1BO60333 1816 aa15.66■□□□□ 0.1
TOP3B-216ENST00000487485 CLTCL1P53675 1640 aa15.65■□□□□ 0.1
TOP3B-216ENST00000487485 AHDC1Q5TGY3 1603 aaPredicted RBP15.65■□□□□ 0.1
TOP3B-216ENST00000487485 DHX57Q6P158 1386 aaKnown RBP15.63■□□□□ 0.09
TOP3B-216ENST00000487485 PIK3R4Q99570 1358 aa15.63■□□□□ 0.09
TOP3B-216ENST00000487485 PTPRUQ92729 1446 aa15.63■□□□□ 0.09
TOP3B-216ENST00000487485 SHPRHQ149N8 1683 aa15.63■□□□□ 0.09
TOP3B-216ENST00000487485 AFF2P51816 1311 aa15.63■□□□□ 0.09
TOP3B-216ENST00000487485 ANKRD30BQ9BXX2 1392 aa15.62■□□□□ 0.09
TOP3B-216ENST00000487485 CCDC144AA2RUR9 1427 aa15.62■□□□□ 0.09
TOP3B-216ENST00000487485 SRCAPQ6ZRS2 3230 aa15.62■□□□□ 0.09
TOP3B-216ENST00000487485 DIP2AQ14689 1571 aa15.6■□□□□ 0.09
TOP3B-216ENST00000487485 DDX17Q92841 729 aaKnown RBP15.59■□□□□ 0.09
TOP3B-216ENST00000487485 CDK12Q9NYV4 1490 aaPredicted RBP15.59■□□□□ 0.09
TOP3B-216ENST00000487485 QTRT2Q9H974 415 aaKnown RBP15.58■□□□□ 0.08
TOP3B-216ENST00000487485 LRRC59Q96AG4 307 aaKnown RBP15.57■□□□□ 0.08
TOP3B-216ENST00000487485 C8orf37Q96NL8 207 aa15.57■□□□□ 0.08
TOP3B-216ENST00000487485 ZNF326Q5BKZ1 582 aaKnown RBP15.56■□□□□ 0.08
TOP3B-216ENST00000487485 ASXL1Q8IXJ9 1541 aa15.56■□□□□ 0.08
TOP3B-216ENST00000487485 MST1RQ04912 1400 aa15.55■□□□□ 0.08
TOP3B-216ENST00000487485 RBM6P78332 1123 aaKnown RBP15.55■□□□□ 0.08
TOP3B-216ENST00000487485 DCCP43146 1447 aa15.54■□□□□ 0.08
TOP3B-216ENST00000487485 RGL3Q3MIN7 710 aa15.54■□□□□ 0.08
TOP3B-216ENST00000487485 RGS12O14924 1447 aa15.53■□□□□ 0.08
TOP3B-216ENST00000487485 METP08581 1390 aa15.53■□□□□ 0.08
TOP3B-216ENST00000487485 SIN3AQ96ST3 1273 aa15.53■□□□□ 0.08
TOP3B-216ENST00000487485 SPATA31E1Q6ZUB1 1445 aa15.52■□□□□ 0.08
TOP3B-216ENST00000487485 PNPLA6Q8IY17 1366 aa15.52■□□□□ 0.08
TOP3B-216ENST00000487485 ADAMTS2O95450 1211 aa15.51■□□□□ 0.07
TOP3B-216ENST00000487485 NGLY1Q96IV0 654 aa15.51■□□□□ 0.07
TOP3B-216ENST00000487485 PPLO60437 1756 aa15.51■□□□□ 0.07
TOP3B-216ENST00000487485 RPGRIP1LQ68CZ1 1315 aa15.5■□□□□ 0.07
TOP3B-216ENST00000487485 NEXMIFQ5QGS0 1516 aa15.5■□□□□ 0.07
TOP3B-216ENST00000487485 NEUROD1Q13562 356 aa15.5■□□□□ 0.07
TOP3B-216ENST00000487485 NHSL1Q5SYE7 1610 aa15.5■□□□□ 0.07
TOP3B-216ENST00000487485 NRXN3Q9Y4C0 1643 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms