RNA–Protein interactions for RNA: ENST00000487223.5

CAPN2-209, Transcript of calpain 2, humanhuman

TSL 2

Gene CAPN2, Length 2,991 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2-209ENST00000487223 TMEM2Q9UHN6 1383 aa9.7□□□□□ -0.86
CAPN2-209ENST00000487223 CNKSR2Q8WXI2 1034 aa9.7□□□□□ -0.86
CAPN2-209ENST00000487223 ABCC5O15440 1437 aa9.7□□□□□ -0.86
CAPN2-209ENST00000487223 COL16A1Q07092 1604 aaPredicted RBP9.7□□□□□ -0.86
CAPN2-209ENST00000487223 ANKRD30AQ9BXX3 1397 aa9.7□□□□□ -0.86
CAPN2-209ENST00000487223 PLEKHG5O94827 1062 aa9.69□□□□□ -0.86
CAPN2-209ENST00000487223 SLC52A1Q9NWF4 448 aa9.69□□□□□ -0.86
CAPN2-209ENST00000487223 TSPY4P0CV99 314 aa9.68□□□□□ -0.86
CAPN2-209ENST00000487223 TSPY10P0CW01 314 aa9.68□□□□□ -0.86
CAPN2-209ENST00000487223 HDGFP51858 240 aaKnown RBP9.67□□□□□ -0.86
CAPN2-209ENST00000487223 KNDC1Q76NI1 1749 aa9.67□□□□□ -0.86
CAPN2-209ENST00000487223 ROBO1Q9Y6N7 1651 aa9.67□□□□□ -0.86
CAPN2-209ENST00000487223 SPHKAPQ2M3C7 1700 aa9.67□□□□□ -0.86
CAPN2-209ENST00000487223 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.66□□□□□ -0.86
CAPN2-209ENST00000487223 PHLPP1O60346 1717 aa9.66□□□□□ -0.86
CAPN2-209ENST00000487223 HNRNPMP52272 730 aaKnown RBP eCLIP9.66□□□□□ -0.86
CAPN2-209ENST00000487223 CEBPAP49715 358 aaPredicted RBP9.66□□□□□ -0.86
CAPN2-209ENST00000487223 NCKAP5LQ9HCH0 1330 aa9.65□□□□□ -0.86
CAPN2-209ENST00000487223 KIF15Q9NS87 1388 aa9.65□□□□□ -0.86
CAPN2-209ENST00000487223 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.65□□□□□ -0.87
CAPN2-209ENST00000487223 WASHC2CQ9Y4E1 1318 aa9.65□□□□□ -0.87
CAPN2-209ENST00000487223 KCNA6P17658 529 aa9.64□□□□□ -0.87
CAPN2-209ENST00000487223 MLECQ14165 292 aa9.64□□□□□ -0.87
CAPN2-209ENST00000487223 ZNF335Q9H4Z2 1342 aaPredicted RBP9.64□□□□□ -0.87
CAPN2-209ENST00000487223 E9PCH4 1651 aa9.64□□□□□ -0.87
CAPN2-209ENST00000487223 TIMELESSQ9UNS1 1208 aa9.63□□□□□ -0.87
CAPN2-209ENST00000487223 SPATA31A6Q5VVP1 1343 aa9.63□□□□□ -0.87
CAPN2-209ENST00000487223 ARID3CA6NKF2 412 aa9.63□□□□□ -0.87
CAPN2-209ENST00000487223 FKBP8Q14318 412 aa9.62□□□□□ -0.87
CAPN2-209ENST00000487223 UBAP1LF5GYI3 381 aa9.62□□□□□ -0.87
CAPN2-209ENST00000487223 NRXN3Q9Y4C0 1643 aa9.61□□□□□ -0.87
CAPN2-209ENST00000487223 PTCH1Q13635 1447 aa9.61□□□□□ -0.87
CAPN2-209ENST00000487223 EID1Q9Y6B2 187 aa9.61□□□□□ -0.87
CAPN2-209ENST00000487223 SETD5Q9C0A6 1442 aa9.61□□□□□ -0.87
CAPN2-209ENST00000487223 KIF1AQ12756 1690 aa9.6□□□□□ -0.87
CAPN2-209ENST00000487223 JCADQ9P266 1359 aa9.6□□□□□ -0.87
CAPN2-209ENST00000487223 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.59□□□□□ -0.87
CAPN2-209ENST00000487223 MARF1Q9Y4F3 1742 aaKnown RBP9.59□□□□□ -0.87
CAPN2-209ENST00000487223 KIF3BO15066 747 aa9.59□□□□□ -0.87
CAPN2-209ENST00000487223 TBX22Q9Y458 520 aa9.59□□□□□ -0.87
CAPN2-209ENST00000487223 KLHL34Q8N239 644 aa9.59□□□□□ -0.87
CAPN2-209ENST00000487223 CDC42BPGQ6DT37 1551 aa9.58□□□□□ -0.88
CAPN2-209ENST00000487223 ARXQ96QS3 562 aa9.58□□□□□ -0.88
CAPN2-209ENST00000487223 MYT1LQ9UL68 1186 aa9.57□□□□□ -0.88
CAPN2-209ENST00000487223 IFT172Q9UG01 1749 aa9.57□□□□□ -0.88
CAPN2-209ENST00000487223 KIF1BO60333 1816 aa9.56□□□□□ -0.88
CAPN2-209ENST00000487223 MSH6P52701 1360 aa9.56□□□□□ -0.88
CAPN2-209ENST00000487223 ILDR2Q71H61 639 aa9.56□□□□□ -0.88
CAPN2-209ENST00000487223 RIMS2Q9UQ26 1411 aa9.55□□□□□ -0.88
CAPN2-209ENST00000487223 MAPK8IP2Q13387 824 aaPredicted RBP9.55□□□□□ -0.88
CAPN2-209ENST00000487223 MYO5BQ9ULV0 1848 aa9.55□□□□□ -0.88
CAPN2-209ENST00000487223 GGT6Q6P531 493 aa9.54□□□□□ -0.88
CAPN2-209ENST00000487223 ADAMTS13Q76LX8 1427 aa9.54□□□□□ -0.88
CAPN2-209ENST00000487223 ANKRD50Q9ULJ7 1429 aa9.54□□□□□ -0.88
CAPN2-209ENST00000487223 NEXMIFQ5QGS0 1516 aa9.54□□□□□ -0.88
CAPN2-209ENST00000487223 TECPR2O15040 1411 aa9.53□□□□□ -0.88
CAPN2-209ENST00000487223 ASXL1Q8IXJ9 1541 aa9.53□□□□□ -0.88
CAPN2-209ENST00000487223 PPLO60437 1756 aa9.53□□□□□ -0.88
CAPN2-209ENST00000487223 RPGRIP1LQ68CZ1 1315 aa9.53□□□□□ -0.88
CAPN2-209ENST00000487223 HSPA1LP34931 641 aa9.53□□□□□ -0.88
CAPN2-209ENST00000487223 LRP5O75197 1615 aa9.52□□□□□ -0.88
CAPN2-209ENST00000487223 LOC105371045A0A1W2PR82 267 aa9.52□□□□□ -0.88
CAPN2-209ENST00000487223 NALCNQ8IZF0 1738 aa9.52□□□□□ -0.89
CAPN2-209ENST00000487223 ADGRB2O60241 1585 aa9.52□□□□□ -0.89
CAPN2-209ENST00000487223 ZNF777Q9ULD5 760 aaPredicted RBP9.52□□□□□ -0.89
CAPN2-209ENST00000487223 ZNF644Q9H582 1327 aaPredicted RBP9.51□□□□□ -0.89
CAPN2-209ENST00000487223 NWD2Q9ULI1 1742 aa9.51□□□□□ -0.89
CAPN2-209ENST00000487223 ATP1B4Q9UN42 357 aaPredicted RBP9.51□□□□□ -0.89
CAPN2-209ENST00000487223 ADGRL3Q9HAR2 1447 aa9.51□□□□□ -0.89
CAPN2-209ENST00000487223 HFM1A2PYH4 1435 aa9.51□□□□□ -0.89
CAPN2-209ENST00000487223 DLC1Q96QB1 1528 aa9.5□□□□□ -0.89
CAPN2-209ENST00000487223 TMEM94Q12767 1356 aa9.49□□□□□ -0.89
CAPN2-209ENST00000487223 RRBP1Q9P2E9 1410 aaKnown RBP9.49□□□□□ -0.89
CAPN2-209ENST00000487223 ZNF772Q68DY9 489 aaPredicted RBP9.48□□□□□ -0.89
CAPN2-209ENST00000487223 SIRT1Q96EB6 747 aa9.48□□□□□ -0.89
CAPN2-209ENST00000487223 MST1RQ04912 1400 aa9.48□□□□□ -0.89
CAPN2-209ENST00000487223 FBXO31Q5XUX0 539 aaPredicted RBP9.48□□□□□ -0.89
CAPN2-209ENST00000487223 TXNDC2Q86VQ3 553 aa9.47□□□□□ -0.89
CAPN2-209ENST00000487223 CADPS2Q86UW7 1296 aa9.47□□□□□ -0.89
CAPN2-209ENST00000487223 CLTCL1P53675 1640 aa9.47□□□□□ -0.89
CAPN2-209ENST00000487223 FMN2Q9NZ56 1722 aa9.46□□□□□ -0.89
CAPN2-209ENST00000487223 NRXN1Q9ULB1 1477 aa9.46□□□□□ -0.9
CAPN2-209ENST00000487223 SCAF1Q9H7N4 1312 aaKnown RBP9.45□□□□□ -0.9
CAPN2-209ENST00000487223 RGPD3A6NKT7 1758 aaPredicted RBP9.45□□□□□ -0.9
CAPN2-209ENST00000487223 RGPD4Q7Z3J3 1758 aa9.45□□□□□ -0.9
CAPN2-209ENST00000487223 MYOM2P54296 1465 aa9.45□□□□□ -0.9
CAPN2-209ENST00000487223 SLC4A2P04920 1241 aa9.45□□□□□ -0.9
CAPN2-209ENST00000487223 LTKP29376 864 aa9.44□□□□□ -0.9
CAPN2-209ENST00000487223 CCDC125Q86Z20 511 aa9.44□□□□□ -0.9
CAPN2-209ENST00000487223 STAC3Q96MF2 364 aa9.43□□□□□ -0.9
CAPN2-209ENST00000487223 HRCP23327 699 aa9.43□□□□□ -0.9
CAPN2-209ENST00000487223 C19orf44Q9H6X5 657 aa9.42□□□□□ -0.9
CAPN2-209ENST00000487223 KIAA1210Q9ULL0 1709 aa9.42□□□□□ -0.9
CAPN2-209ENST00000487223 TULP1O00294 542 aaPredicted RBP9.42□□□□□ -0.9
CAPN2-209ENST00000487223 RANGAP1P46060 587 aaPredicted RBP9.42□□□□□ -0.9
CAPN2-209ENST00000487223 LRP6O75581 1613 aa9.42□□□□□ -0.9
CAPN2-209ENST00000487223 ABCA3Q99758 1704 aa9.41□□□□□ -0.9
CAPN2-209ENST00000487223 LRPPRCP42704 1394 aaKnown RBP9.41□□□□□ -0.9
CAPN2-209ENST00000487223 ATRNO75882 1429 aa9.41□□□□□ -0.9
CAPN2-209ENST00000487223 IDI1Q13907 227 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms