RNA–Protein interactions for RNA: ENST00000487204.1

CCNB3-206, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 1,180 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-206ENST00000487204 VGFO15240 615 aaPredicted RBP10.12□□□□□ -0.79
CCNB3-206ENST00000487204 CHGAP10645 457 aaKnown RBP10.12□□□□□ -0.79
CCNB3-206ENST00000487204 DIEXFQ68CQ4 756 aaKnown RBP10.12□□□□□ -0.79
CCNB3-206ENST00000487204 CARD11Q9BXL7 1154 aa10.12□□□□□ -0.79
CCNB3-206ENST00000487204 SYNMO15061 1565 aa10.12□□□□□ -0.79
CCNB3-206ENST00000487204 SIGLEC1Q9BZZ2 1709 aa10.12□□□□□ -0.79
CCNB3-206ENST00000487204 SLC24A1O60721 1099 aa10.11□□□□□ -0.79
CCNB3-206ENST00000487204 HDGFP51858 240 aaKnown RBP10.11□□□□□ -0.79
CCNB3-206ENST00000487204 IDI1Q13907 227 aa10.11□□□□□ -0.79
CCNB3-206ENST00000487204 STAG3Q9UJ98 1225 aa10.11□□□□□ -0.79
CCNB3-206ENST00000487204 GPRASP1Q5JY77 1395 aa10.11□□□□□ -0.79
CCNB3-206ENST00000487204 UGGT1Q9NYU2 1555 aa10.1□□□□□ -0.79
CCNB3-206ENST00000487204 HSPA5P11021 654 aaKnown RBP10.1□□□□□ -0.79
CCNB3-206ENST00000487204 LAMC1P11047 1609 aa10.1□□□□□ -0.79
CCNB3-206ENST00000487204 ZFYVE9O95405 1425 aa10.09□□□□□ -0.79
CCNB3-206ENST00000487204 SLC4A2P04920 1241 aa10.09□□□□□ -0.79
CCNB3-206ENST00000487204 FBXO31Q5XUX0 539 aaPredicted RBP10.09□□□□□ -0.79
CCNB3-206ENST00000487204 USP47Q96K76 1375 aa10.09□□□□□ -0.79
CCNB3-206ENST00000487204 NRXN1Q9ULB1 1477 aa10.09□□□□□ -0.79
CCNB3-206ENST00000487204 TRPM1Q7Z4N2 1603 aa10.08□□□□□ -0.8
CCNB3-206ENST00000487204 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.08□□□□□ -0.8
CCNB3-206ENST00000487204 TNRQ92752 1358 aa10.08□□□□□ -0.8
CCNB3-206ENST00000487204 NLRP1Q9C000 1473 aa10.08□□□□□ -0.8
CCNB3-206ENST00000487204 MADDQ8WXG6 1647 aa10.07□□□□□ -0.8
CCNB3-206ENST00000487204 KIAA1210Q9ULL0 1709 aa10.07□□□□□ -0.8
CCNB3-206ENST00000487204 EIF3AQ14152 1382 aaKnown RBP10.07□□□□□ -0.8
CCNB3-206ENST00000487204 KDM5AP29375 1690 aaKnown RBP10.06□□□□□ -0.8
CCNB3-206ENST00000487204 IFT172Q9UG01 1749 aa10.06□□□□□ -0.8
CCNB3-206ENST00000487204 TMEM131LA2VDJ0 1609 aa10.06□□□□□ -0.8
CCNB3-206ENST00000487204 CFAP65Q6ZU64 1925 aaKnown RBP10.05□□□□□ -0.8
CCNB3-206ENST00000487204 U3KPZ7 1027 aaPredicted RBP10.05□□□□□ -0.8
CCNB3-206ENST00000487204 FER1L4A9Z1Z3 1794 aa10.05□□□□□ -0.8
CCNB3-206ENST00000487204 PIK3C2GO75747 1445 aa10.05□□□□□ -0.8
CCNB3-206ENST00000487204 PPLO60437 1756 aa10.04□□□□□ -0.8
CCNB3-206ENST00000487204 NEXMIFQ5QGS0 1516 aa10.04□□□□□ -0.8
CCNB3-206ENST00000487204 POTEHQ6S545 545 aa10.04□□□□□ -0.8
CCNB3-206ENST00000487204 C14orf93Q9H972 538 aaKnown RBP10.04□□□□□ -0.8
CCNB3-206ENST00000487204 SETBP1Q9Y6X0 1596 aa10.04□□□□□ -0.8
CCNB3-206ENST00000487204 ADGRF5Q8IZF2 1346 aa10.04□□□□□ -0.8
CCNB3-206ENST00000487204 A2ML1A8K2U0 1454 aa10.04□□□□□ -0.8
CCNB3-206ENST00000487204 SCAF11Q99590 1463 aaKnown RBP10.04□□□□□ -0.8
CCNB3-206ENST00000487204 NBPF1Q3BBV0 1214 aa10.03□□□□□ -0.8
CCNB3-206ENST00000487204 CDCA8Q53HL2 280 aa10.02□□□□□ -0.81
CCNB3-206ENST00000487204 HIRIP3Q9BW71 556 aaPredicted RBP10.02□□□□□ -0.81
CCNB3-206ENST00000487204 RIMS2Q9UQ26 1411 aa10.01□□□□□ -0.81
CCNB3-206ENST00000487204 ST20-MTHFSA0A0A6YYL1 179 aa10.01□□□□□ -0.81
CCNB3-206ENST00000487204 CFAP70Q5T0N1 1121 aa10.01□□□□□ -0.81
CCNB3-206ENST00000487204 THEMISQ8N1K5 641 aaPredicted RBP10.01□□□□□ -0.81
CCNB3-206ENST00000487204 C3P01024 1663 aa10.01□□□□□ -0.81
CCNB3-206ENST00000487204 CCDC7Q96M83 1385 aa10.01□□□□□ -0.81
CCNB3-206ENST00000487204 ADAMTSL3P82987 1691 aa10□□□□□ -0.81
CCNB3-206ENST00000487204 TMF1P82094 1093 aa10□□□□□ -0.81
CCNB3-206ENST00000487204 EID1Q9Y6B2 187 aa10□□□□□ -0.81
CCNB3-206ENST00000487204 WASHC2AQ641Q2 1341 aa10□□□□□ -0.81
CCNB3-206ENST00000487204 TMEM2Q9UHN6 1383 aa10□□□□□ -0.81
CCNB3-206ENST00000487204 DDX10Q13206 875 aaKnown RBP9.99□□□□□ -0.81
CCNB3-206ENST00000487204 CEBPAP49715 358 aaPredicted RBP9.98□□□□□ -0.81
CCNB3-206ENST00000487204 KIF7Q2M1P5 1343 aa9.98□□□□□ -0.81
CCNB3-206ENST00000487204 POLR1AO95602 1720 aaPredicted RBP9.98□□□□□ -0.81
CCNB3-206ENST00000487204 SBNO2Q9Y2G9 1366 aa9.98□□□□□ -0.81
CCNB3-206ENST00000487204 IQGAP1P46940 1657 aa9.97□□□□□ -0.81
CCNB3-206ENST00000487204 RIMS1Q86UR5 1692 aaKnown RBP9.96□□□□□ -0.81
CCNB3-206ENST00000487204 UBR1Q8IWV7 1749 aa9.96□□□□□ -0.81
CCNB3-206ENST00000487204 SLIT1O75093 1534 aa9.96□□□□□ -0.82
CCNB3-206ENST00000487204 ADGRB1O14514 1584 aa9.96□□□□□ -0.82
CCNB3-206ENST00000487204 ANP32CO43423 234 aa9.95□□□□□ -0.82
CCNB3-206ENST00000487204 TESK2Q96S53 571 aa9.95□□□□□ -0.82
CCNB3-206ENST00000487204 FOXD4L1Q9NU39 408 aa9.95□□□□□ -0.82
CCNB3-206ENST00000487204 CENPJQ9HC77 1338 aaPredicted RBP9.95□□□□□ -0.82
CCNB3-206ENST00000487204 PLEKHG1Q9ULL1 1385 aa9.95□□□□□ -0.82
CCNB3-206ENST00000487204 ARHGAP23Q9P227 1491 aa9.95□□□□□ -0.82
CCNB3-206ENST00000487204 MYO5BQ9ULV0 1848 aa9.95□□□□□ -0.82
CCNB3-206ENST00000487204 MYO3AQ8NEV4 1616 aa9.94□□□□□ -0.82
CCNB3-206ENST00000487204 ALKQ9UM73 1620 aa9.94□□□□□ -0.82
CCNB3-206ENST00000487204 C11orf95C9JLR9 678 aaPredicted RBP9.94□□□□□ -0.82
CCNB3-206ENST00000487204 NUTM2DQ5VT03 806 aaPredicted RBP9.94□□□□□ -0.82
CCNB3-206ENST00000487204 TXNDC2Q86VQ3 553 aa9.94□□□□□ -0.82
CCNB3-206ENST00000487204 PUS7Q96PZ0 661 aaKnown RBP9.94□□□□□ -0.82
CCNB3-206ENST00000487204 CEP170BQ9Y4F5 1589 aaPredicted RBP9.93□□□□□ -0.82
CCNB3-206ENST00000487204 SIRT1Q96EB6 747 aa9.93□□□□□ -0.82
CCNB3-206ENST00000487204 SETD1BQ9UPS6 1966 aaKnown RBP9.93□□□□□ -0.82
CCNB3-206ENST00000487204 PTPRMP28827 1452 aa9.92□□□□□ -0.82
CCNB3-206ENST00000487204 YTHDC2Q9H6S0 1430 aaKnown RBP9.92□□□□□ -0.82
CCNB3-206ENST00000487204 LRPPRCP42704 1394 aaKnown RBP9.92□□□□□ -0.82
CCNB3-206ENST00000487204 TMEM132EQ6IEE7 984 aa9.92□□□□□ -0.82
CCNB3-206ENST00000487204 BCANQ96GW7 911 aa9.92□□□□□ -0.82
CCNB3-206ENST00000487204 TRAK1Q9UPV9 953 aa9.92□□□□□ -0.82
CCNB3-206ENST00000487204 ABCC11Q96J66 1382 aa9.91□□□□□ -0.82
CCNB3-206ENST00000487204 ZNF142P52746 1687 aaPredicted RBP9.91□□□□□ -0.82
CCNB3-206ENST00000487204 MYCNP04198 464 aaPredicted RBP9.91□□□□□ -0.82
CCNB3-206ENST00000487204 ANKLE2Q86XL3 938 aa9.91□□□□□ -0.82
CCNB3-206ENST00000487204 MIER1Q8N108 512 aa9.91□□□□□ -0.82
CCNB3-206ENST00000487204 DIP2AQ14689 1571 aa9.91□□□□□ -0.82
CCNB3-206ENST00000487204 DLC1Q96QB1 1528 aa9.91□□□□□ -0.82
CCNB3-206ENST00000487204 EVC2Q86UK5 1308 aa9.9□□□□□ -0.82
CCNB3-206ENST00000487204 POLR3GLQ9BT43 218 aa9.9□□□□□ -0.82
CCNB3-206ENST00000487204 POGKQ9P215 609 aa9.9□□□□□ -0.82
CCNB3-206ENST00000487204 TBX22Q9Y458 520 aa9.9□□□□□ -0.82
CCNB3-206ENST00000487204 KTN1Q86UP2 1357 aaKnown RBP9.89□□□□□ -0.83
CCNB3-206ENST00000487204 DISP3Q9P2K9 1392 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms