RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CLK2P49760 499 aaKnown RBP9.8□□□□□ -0.84
PRPF38A-203ENST00000487160 DIXDC1Q155Q3 683 aa9.8□□□□□ -0.84
PRPF38A-203ENST00000487160 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.79□□□□□ -0.84
PRPF38A-203ENST00000487160 EMP3P54852 163 aa9.78□□□□□ -0.84
PRPF38A-203ENST00000487160 DMRTA1Q5VZB9 504 aa9.78□□□□□ -0.84
PRPF38A-203ENST00000487160 MARVELD3Q96A59 401 aa9.78□□□□□ -0.84
PRPF38A-203ENST00000487160 NUTM1Q86Y26 1132 aa9.77□□□□□ -0.85
PRPF38A-203ENST00000487160 LIMD1Q9UGP4 676 aa9.77□□□□□ -0.85
PRPF38A-203ENST00000487160 RABGEF1Q9UJ41 708 aa9.77□□□□□ -0.85
PRPF38A-203ENST00000487160 RIC3Q7Z5B4 369 aa9.76□□□□□ -0.85
PRPF38A-203ENST00000487160 RDH13Q8NBN7 331 aa9.76□□□□□ -0.85
PRPF38A-203ENST00000487160 SLC4A5Q9BY07 1137 aa9.76□□□□□ -0.85
PRPF38A-203ENST00000487160 SEPT9Q9UHD8 586 aaPredicted RBP9.76□□□□□ -0.85
PRPF38A-203ENST00000487160 FAM205CA6NFA0 338 aa9.75□□□□□ -0.85
PRPF38A-203ENST00000487160 SWT1Q5T5J6 900 aaKnown RBP9.74□□□□□ -0.85
PRPF38A-203ENST00000487160 FBXO31Q5XUX0 539 aaPredicted RBP9.74□□□□□ -0.85
PRPF38A-203ENST00000487160 MOXD2PA6NHM9 499 aa9.73□□□□□ -0.85
PRPF38A-203ENST00000487160 SPTLC1O15269 473 aa9.73□□□□□ -0.85
PRPF38A-203ENST00000487160 PBX2P40425 430 aa9.73□□□□□ -0.85
PRPF38A-203ENST00000487160 ZNF687Q8N1G0 1237 aa9.73□□□□□ -0.85
PRPF38A-203ENST00000487160 VPS9D1Q9Y2B5 631 aa9.73□□□□□ -0.85
PRPF38A-203ENST00000487160 NDUFV2P19404 249 aa9.72□□□□□ -0.85
PRPF38A-203ENST00000487160 MCM6Q14566 821 aa9.72□□□□□ -0.85
PRPF38A-203ENST00000487160 RSBN1LQ6PCB5 846 aaPredicted RBP9.72□□□□□ -0.85
PRPF38A-203ENST00000487160 FAM163AQ96GL9 167 aaPredicted RBP9.72□□□□□ -0.85
PRPF38A-203ENST00000487160 SLC10A3P09131 477 aa9.71□□□□□ -0.86
PRPF38A-203ENST00000487160 RFC5P40937 340 aa9.71□□□□□ -0.86
PRPF38A-203ENST00000487160 KDM4AO75164 1064 aa9.7□□□□□ -0.86
PRPF38A-203ENST00000487160 GCGRP47871 477 aa9.7□□□□□ -0.86
PRPF38A-203ENST00000487160 HDGFP51858 240 aaKnown RBP9.7□□□□□ -0.86
PRPF38A-203ENST00000487160 CSPP1Q1MSJ5 1256 aa9.7□□□□□ -0.86
PRPF38A-203ENST00000487160 TUSC1Q2TAM9 212 aa9.7□□□□□ -0.86
PRPF38A-203ENST00000487160 RSPH4AQ5TD94 716 aa9.7□□□□□ -0.86
PRPF38A-203ENST00000487160 CLUAP1Q96AJ1 413 aa9.7□□□□□ -0.86
PRPF38A-203ENST00000487160 POTEB3A0JP26 581 aa9.69□□□□□ -0.86
PRPF38A-203ENST00000487160 UBTFP17480 764 aaKnown RBP9.69□□□□□ -0.86
PRPF38A-203ENST00000487160 FAM98CQ17RN3 349 aaKnown RBP9.69□□□□□ -0.86
PRPF38A-203ENST00000487160 PPP2R2DQ66LE6 453 aa9.69□□□□□ -0.86
PRPF38A-203ENST00000487160 POTEBQ6S5H4 581 aa9.69□□□□□ -0.86
PRPF38A-203ENST00000487160 PCDHB15Q9Y5E8 787 aa9.69□□□□□ -0.86
PRPF38A-203ENST00000487160 HS3ST6Q96QI5 342 aa9.68□□□□□ -0.86
PRPF38A-203ENST00000487160 ARXQ96QS3 562 aa9.68□□□□□ -0.86
PRPF38A-203ENST00000487160 QPCTQ16769 361 aa9.67□□□□□ -0.86
PRPF38A-203ENST00000487160 A6NJR5 290 aa9.66□□□□□ -0.86
PRPF38A-203ENST00000487160 GJA5P36382 358 aa9.66□□□□□ -0.86
PRPF38A-203ENST00000487160 TMEM259Q4ZIN3 620 aa9.66□□□□□ -0.86
PRPF38A-203ENST00000487160 SAMD7Q7Z3H4 446 aa9.66□□□□□ -0.86
PRPF38A-203ENST00000487160 BANK1Q8NDB2 785 aa9.66□□□□□ -0.86
PRPF38A-203ENST00000487160 SNRKQ9NRH2 765 aa9.66□□□□□ -0.86
PRPF38A-203ENST00000487160 BHMG1C9JSJ3 638 aaPredicted RBP9.65□□□□□ -0.86
PRPF38A-203ENST00000487160 HOXA2O43364 376 aa9.65□□□□□ -0.86
PRPF38A-203ENST00000487160 LILRB3O75022 631 aa9.65□□□□□ -0.86
PRPF38A-203ENST00000487160 USP46P62068 366 aa9.65□□□□□ -0.86
PRPF38A-203ENST00000487160 LAPTM4BQ86VI4 370 aa9.65□□□□□ -0.86
PRPF38A-203ENST00000487160 NBPF3Q9H094 633 aa9.65□□□□□ -0.86
PRPF38A-203ENST00000487160 SPDYE5A6NIY4 337 aa9.64□□□□□ -0.87
PRPF38A-203ENST00000487160 SLC4A3P48751 1232 aa9.64□□□□□ -0.87
PRPF38A-203ENST00000487160 RTL5Q5HYW3 569 aaPredicted RBP9.64□□□□□ -0.87
PRPF38A-203ENST00000487160 SLF2Q8IX21 1173 aa9.64□□□□□ -0.87
PRPF38A-203ENST00000487160 CABLES1Q8TDN4 633 aa9.64□□□□□ -0.87
PRPF38A-203ENST00000487160 NUTM2BA6NNL0 878 aaPredicted RBP9.63□□□□□ -0.87
PRPF38A-203ENST00000487160 NUTM2EB1AL46 878 aaPredicted RBP9.63□□□□□ -0.87
PRPF38A-203ENST00000487160 TK2O00142 265 aa9.63□□□□□ -0.87
PRPF38A-203ENST00000487160 FDX1P10109 184 aa9.63□□□□□ -0.87
PRPF38A-203ENST00000487160 NUTM2DQ5VT03 806 aaPredicted RBP9.63□□□□□ -0.87
PRPF38A-203ENST00000487160 NUTM2AQ8IVF1 878 aaPredicted RBP9.63□□□□□ -0.87
PRPF38A-203ENST00000487160 HLA-CQ95604 372 aa9.63□□□□□ -0.87
PRPF38A-203ENST00000487160 POM121Q96HA1 1249 aa9.63□□□□□ -0.87
PRPF38A-203ENST00000487160 ZFRQ96KR1 1074 aaKnown RBP9.63□□□□□ -0.87
PRPF38A-203ENST00000487160 ARID3CA6NKF2 412 aa9.62□□□□□ -0.87
PRPF38A-203ENST00000487160 RNF40O75150 1001 aa9.62□□□□□ -0.87
PRPF38A-203ENST00000487160 GUCA2AQ02747 115 aa9.62□□□□□ -0.87
PRPF38A-203ENST00000487160 C1orf115Q9H7X2 142 aa9.62□□□□□ -0.87
PRPF38A-203ENST00000487160 PCDHGC3Q9UN70 934 aa9.62□□□□□ -0.87
PRPF38A-203ENST00000487160 TRAK2O60296 914 aa9.61□□□□□ -0.87
PRPF38A-203ENST00000487160 LCE2DQ5TA82 110 aaPredicted RBP9.61□□□□□ -0.87
PRPF38A-203ENST00000487160 PRPF38BQ5VTL8 546 aaKnown RBP9.61□□□□□ -0.87
PRPF38A-203ENST00000487160 RAD21O60216 631 aa9.6□□□□□ -0.87
PRPF38A-203ENST00000487160 AP1G2O75843 785 aa9.6□□□□□ -0.87
PRPF38A-203ENST00000487160 CFHP08603 1231 aa9.6□□□□□ -0.87
PRPF38A-203ENST00000487160 HRCP23327 699 aa9.6□□□□□ -0.87
PRPF38A-203ENST00000487160 LSM11P83369 360 aaKnown RBP eCLIP9.6□□□□□ -0.87
PRPF38A-203ENST00000487160 FUT2Q10981 343 aa9.6□□□□□ -0.87
PRPF38A-203ENST00000487160 ADGRD1Q6QNK2 874 aa9.6□□□□□ -0.87
PRPF38A-203ENST00000487160 MRPL50Q8N5N7 158 aaKnown RBP9.6□□□□□ -0.87
PRPF38A-203ENST00000487160 ZBTB3Q9H5J0 574 aa9.6□□□□□ -0.87
PRPF38A-203ENST00000487160 APBB1O00213 710 aa9.59□□□□□ -0.87
PRPF38A-203ENST00000487160 COG6Q9Y2V7 657 aa9.59□□□□□ -0.87
PRPF38A-203ENST00000487160 HOMEZQ8IX15 550 aa9.58□□□□□ -0.88
PRPF38A-203ENST00000487160 MTMR14Q8NCE2 650 aa9.58□□□□□ -0.88
PRPF38A-203ENST00000487160 GRIPAP1Q4V328 841 aa9.57□□□□□ -0.88
PRPF38A-203ENST00000487160 PROSER2Q86WR7 435 aaPredicted RBP9.57□□□□□ -0.88
PRPF38A-203ENST00000487160 ARID3AQ99856 593 aa9.57□□□□□ -0.88
PRPF38A-203ENST00000487160 HRO43593 1189 aa9.56□□□□□ -0.88
PRPF38A-203ENST00000487160 FNBP4Q8N3X1 1017 aaPredicted RBP9.56□□□□□ -0.88
PRPF38A-203ENST00000487160 LRCH3Q96II8 777 aa9.56□□□□□ -0.88
PRPF38A-203ENST00000487160 ATP6V1AP38606 617 aa9.55□□□□□ -0.88
PRPF38A-203ENST00000487160 MTMR2Q13614 643 aa9.55□□□□□ -0.88
PRPF38A-203ENST00000487160 KMT5BQ4FZB7 885 aa9.55□□□□□ -0.88
PRPF38A-203ENST00000487160 ANKRD13DQ6ZTN6 518 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms