RNA–Protein interactions for RNA: ENST00000487109.5

ABCA2-218, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 8,031 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-218ENST00000487109 HOMER1Q86YM7 354 aa15.1■□□□□ 0.01
ABCA2-218ENST00000487109 PTPRGP23470 1445 aa15.1■□□□□ 0.01
ABCA2-218ENST00000487109 EVC2Q86UK5 1308 aa15.09■□□□□ 0.01
ABCA2-218ENST00000487109 DHX16O60231 1041 aaKnown RBP15.09■□□□□ 0.01
ABCA2-218ENST00000487109 NOM1Q5C9Z4 860 aaKnown RBP15.09■□□□□ 0.01
ABCA2-218ENST00000487109 VPS37DQ86XT2 251 aa15.08■□□□□ 0.01
ABCA2-218ENST00000487109 LTV1Q96GA3 475 aaPredicted RBP15.08■□□□□ 0
ABCA2-218ENST00000487109 STAC3Q96MF2 364 aa15.08■□□□□ 0
ABCA2-218ENST00000487109 R3HCC1Q9Y3T6 440 aaKnown RBP15.08■□□□□ 0
ABCA2-218ENST00000487109 EPS15P42566 896 aa15.08■□□□□ 0
ABCA2-218ENST00000487109 KANK4Q5T7N3 995 aaPredicted RBP15.08■□□□□ 0
ABCA2-218ENST00000487109 CUX1P39880 1505 aa15.08■□□□□ 0
ABCA2-218ENST00000487109 FBXW7Q969H0 707 aa15.07■□□□□ 0
ABCA2-218ENST00000487109 EVA1CP58658 441 aa15.07■□□□□ 0
ABCA2-218ENST00000487109 CGNL1Q0VF96 1302 aa15.07■□□□□ 0
ABCA2-218ENST00000487109 HSP90AB2PQ58FF8 381 aa15.07■□□□□ 0
ABCA2-218ENST00000487109 DDX49Q9Y6V7 483 aaKnown RBP15.06■□□□□ 0
ABCA2-218ENST00000487109 APPP05067 770 aa15.06■□□□□ 0
ABCA2-218ENST00000487109 ZFYVE27Q5T4F4 411 aa15.06■□□□□ 0
ABCA2-218ENST00000487109 C1orf141Q5JVX7 400 aa15.06■□□□□ 0
ABCA2-218ENST00000487109 FOXD1Q16676 465 aa15.06■□□□□ 0
ABCA2-218ENST00000487109 SKOR2Q2VWA4 1001 aaPredicted RBP15.06■□□□□ 0
ABCA2-218ENST00000487109 IPO9Q96P70 1041 aaKnown RBP15.06■□□□□ 0
ABCA2-218ENST00000487109 RSPH6AQ9H0K4 717 aa15.06■□□□□ 0
ABCA2-218ENST00000487109 CENPJQ9HC77 1338 aaPredicted RBP15.06■□□□□ 0
ABCA2-218ENST00000487109 OSCARQ8IYS5 282 aa15.06■□□□□ 0
ABCA2-218ENST00000487109 RDXP35241 583 aaKnown RBP15.06■□□□□ 0
ABCA2-218ENST00000487109 NGEFQ8N5V2 710 aa15.05■□□□□ 0
ABCA2-218ENST00000487109 COG3Q96JB2 828 aa15.05■□□□□ -0
ABCA2-218ENST00000487109 ACBD3Q9H3P7 528 aa15.05■□□□□ -0
ABCA2-218ENST00000487109 CLUAP1Q96AJ1 413 aa15.05■□□□□ -0
ABCA2-218ENST00000487109 PRDM2Q13029 1718 aa15.05■□□□□ -0
ABCA2-218ENST00000487109 CCDC191Q8NCU4 936 aa15.04■□□□□ -0
ABCA2-218ENST00000487109 ERICH2A1L162 156 aa15.04■□□□□ -0
ABCA2-218ENST00000487109 CCDC173Q0VFZ6 552 aa15.04■□□□□ -0
ABCA2-218ENST00000487109 DIAPH3Q9NSV4 1193 aa15.03■□□□□ -0
ABCA2-218ENST00000487109 DCTN1Q14203 1278 aa15.03■□□□□ -0
ABCA2-218ENST00000487109 CPLX1O14810 134 aa15.03■□□□□ -0
ABCA2-218ENST00000487109 CCDC146Q8IYE0 955 aa15.03■□□□□ -0
ABCA2-218ENST00000487109 TRDNQ13061 729 aa15.02■□□□□ -0
ABCA2-218ENST00000487109 RUFY2Q8WXA3 655 aa15.02■□□□□ -0
ABCA2-218ENST00000487109 MYO6Q9UM54 1294 aa15.02□□□□□ -0.01
ABCA2-218ENST00000487109 NFXL1Q6ZNB6 911 aa15.02□□□□□ -0.01
ABCA2-218ENST00000487109 PAF1Q8N7H5 531 aa15.02□□□□□ -0.01
ABCA2-218ENST00000487109 ANKRD45Q5TZF3 282 aa15.01□□□□□ -0.01
ABCA2-218ENST00000487109 MYBBP1AQ9BQG0 1328 aaKnown RBP15.01□□□□□ -0.01
ABCA2-218ENST00000487109 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.01□□□□□ -0.01
ABCA2-218ENST00000487109 WWC2Q6AWC2 1192 aa15.01□□□□□ -0.01
ABCA2-218ENST00000487109 GAPVD1Q14C86 1478 aa15.01□□□□□ -0.01
ABCA2-218ENST00000487109 L3MBTL2Q969R5 705 aa15□□□□□ -0.01
ABCA2-218ENST00000487109 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15□□□□□ -0.01
ABCA2-218ENST00000487109 SAMD1Q6SPF0 538 aaPredicted RBP15□□□□□ -0.01
ABCA2-218ENST00000487109 NEXNQ0ZGT2 675 aa15□□□□□ -0.01
ABCA2-218ENST00000487109 BICD2Q8TD16 824 aa14.99□□□□□ -0.01
ABCA2-218ENST00000487109 ARGLU1Q9NWB6 273 aaPredicted RBP14.99□□□□□ -0.01
ABCA2-218ENST00000487109 ANO2Q9NQ90 1003 aa14.99□□□□□ -0.01
ABCA2-218ENST00000487109 ZRSR2Q15696 482 aaKnown RBP14.99□□□□□ -0.01
ABCA2-218ENST00000487109 HSP90B2PQ58FF3 399 aa14.99□□□□□ -0.01
ABCA2-218ENST00000487109 MYOM3Q5VTT5 1437 aa14.99□□□□□ -0.01
ABCA2-218ENST00000487109 ROCK1Q13464 1354 aa14.98□□□□□ -0.01
ABCA2-218ENST00000487109 ZKSCAN1P17029 563 aaPredicted RBP14.98□□□□□ -0.01
ABCA2-218ENST00000487109 SASS6Q6UVJ0 657 aa14.98□□□□□ -0.01
ABCA2-218ENST00000487109 C9orf78Q9NZ63 289 aaPredicted RBP14.98□□□□□ -0.01
ABCA2-218ENST00000487109 CAGE1Q8TC20 777 aa14.97□□□□□ -0.01
ABCA2-218ENST00000487109 MEX3CQ5U5Q3 659 aaKnown RBP14.97□□□□□ -0.01
ABCA2-218ENST00000487109 TTC5Q8N0Z6 440 aa14.97□□□□□ -0.01
ABCA2-218ENST00000487109 VSIG10Q8N0Z9 540 aa14.97□□□□□ -0.01
ABCA2-218ENST00000487109 TRAK1Q9UPV9 953 aa14.97□□□□□ -0.01
ABCA2-218ENST00000487109 OFD1O75665 1012 aa14.97□□□□□ -0.01
ABCA2-218ENST00000487109 TEFQ10587 303 aa14.96□□□□□ -0.01
ABCA2-218ENST00000487109 SAFBQ15424 915 aaKnown RBP eCLIP14.96□□□□□ -0.01
ABCA2-218ENST00000487109 MNS1Q8NEH6 495 aa14.96□□□□□ -0.01
ABCA2-218ENST00000487109 H0YHG0 523 aa14.96□□□□□ -0.02
ABCA2-218ENST00000487109 TMEM132AQ24JP5 1023 aa14.96□□□□□ -0.02
ABCA2-218ENST00000487109 MIA2Q96PC5 1412 aa14.95□□□□□ -0.02
ABCA2-218ENST00000487109 RNF20Q5VTR2 975 aa14.95□□□□□ -0.02
ABCA2-218ENST00000487109 KAT6BQ8WYB5 2073 aa14.95□□□□□ -0.02
ABCA2-218ENST00000487109 E9PSI1 815 aa14.95□□□□□ -0.02
ABCA2-218ENST00000487109 BRMS1Q9HCU9 246 aa14.94□□□□□ -0.02
ABCA2-218ENST00000487109 DDX58O95786 925 aaKnown RBP14.94□□□□□ -0.02
ABCA2-218ENST00000487109 KLHL34Q8N239 644 aa14.93□□□□□ -0.02
ABCA2-218ENST00000487109 DCAF8L1A6NGE4 600 aa14.93□□□□□ -0.02
ABCA2-218ENST00000487109 REC8O95072 547 aa14.93□□□□□ -0.02
ABCA2-218ENST00000487109 IFIT2P09913 472 aaKnown RBP14.93□□□□□ -0.02
ABCA2-218ENST00000487109 OLFM4Q6UX06 510 aa14.93□□□□□ -0.02
ABCA2-218ENST00000487109 NUTM2FA1L443 756 aa14.93□□□□□ -0.02
ABCA2-218ENST00000487109 WASHC2AQ641Q2 1341 aa14.93□□□□□ -0.02
ABCA2-218ENST00000487109 CWC15Q9P013 229 aaKnown RBP14.93□□□□□ -0.02
ABCA2-218ENST00000487109 FAM13BQ9NYF5 915 aa14.93□□□□□ -0.02
ABCA2-218ENST00000487109 RBM33Q96EV2 1170 aaKnown RBP14.92□□□□□ -0.02
ABCA2-218ENST00000487109 IFT57Q9NWB7 429 aa14.92□□□□□ -0.02
ABCA2-218ENST00000487109 SYTL4Q96C24 671 aaPredicted RBP14.92□□□□□ -0.02
ABCA2-218ENST00000487109 NEFHP12036 1026 aa14.92□□□□□ -0.02
ABCA2-218ENST00000487109 SKIDA1Q1XH10 827 aa14.92□□□□□ -0.02
ABCA2-218ENST00000487109 PLCD4Q9BRC7 762 aa14.91□□□□□ -0.02
ABCA2-218ENST00000487109 NAT10Q9H0A0 1025 aaKnown RBP14.91□□□□□ -0.02
ABCA2-218ENST00000487109 FOSBP53539 338 aa14.91□□□□□ -0.02
ABCA2-218ENST00000487109 FGD5Q6ZNL6 1462 aa14.9□□□□□ -0.02
ABCA2-218ENST00000487109 ERCC4Q92889 916 aaPredicted RBP14.9□□□□□ -0.02
ABCA2-218ENST00000487109 PSME1Q06323 249 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms