RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 RBM46Q8TBY0 533 aaKnown RBP10.21□□□□□ -0.77
SNRNP40-205ENST00000486941 PXYLP1Q8TE99 480 aa10.2□□□□□ -0.78
SNRNP40-205ENST00000486941 ZPR1O75312 459 aa10.19□□□□□ -0.78
SNRNP40-205ENST00000486941 BLOC1S3Q6QNY0 202 aa10.19□□□□□ -0.78
SNRNP40-205ENST00000486941 PRKD2Q9BZL6 878 aa10.19□□□□□ -0.78
SNRNP40-205ENST00000486941 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.19□□□□□ -0.78
SNRNP40-205ENST00000486941 EMID1Q96A84 441 aaPredicted RBP10.18□□□□□ -0.78
SNRNP40-205ENST00000486941 TLL1O43897 1013 aa10.16□□□□□ -0.78
SNRNP40-205ENST00000486941 HAP1P54257 671 aaPredicted RBP10.16□□□□□ -0.78
SNRNP40-205ENST00000486941 METTL3Q86U44 580 aaKnown RBP10.16□□□□□ -0.78
SNRNP40-205ENST00000486941 PCDHB3Q9Y5E6 796 aa10.16□□□□□ -0.78
SNRNP40-205ENST00000486941 ACTN4O43707 911 aaKnown RBP10.15□□□□□ -0.78
SNRNP40-205ENST00000486941 HIC1Q14526 733 aa10.15□□□□□ -0.78
SNRNP40-205ENST00000486941 NLRP7Q8WX94 980 aa10.15□□□□□ -0.78
SNRNP40-205ENST00000486941 PHOX2BQ99453 314 aa10.15□□□□□ -0.78
SNRNP40-205ENST00000486941 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.14□□□□□ -0.79
SNRNP40-205ENST00000486941 CFHP08603 1231 aa10.13□□□□□ -0.79
SNRNP40-205ENST00000486941 NECTIN2Q92692 538 aa10.13□□□□□ -0.79
SNRNP40-205ENST00000486941 GNPATO15228 680 aa10.12□□□□□ -0.79
SNRNP40-205ENST00000486941 OATP04181 439 aa10.11□□□□□ -0.79
SNRNP40-205ENST00000486941 RNF223E7ERA6 249 aa10.1□□□□□ -0.79
SNRNP40-205ENST00000486941 GFRA3O60609 400 aa10.1□□□□□ -0.79
SNRNP40-205ENST00000486941 Q6ZNB5 142 aa10.1□□□□□ -0.79
SNRNP40-205ENST00000486941 V9GY48 417 aaPredicted RBP10.1□□□□□ -0.79
SNRNP40-205ENST00000486941 PPEF1O14829 653 aaPredicted RBP10.09□□□□□ -0.79
SNRNP40-205ENST00000486941 PRR14Q9BWN1 585 aa10.08□□□□□ -0.8
SNRNP40-205ENST00000486941 SLC4A3P48751 1232 aa10.07□□□□□ -0.8
SNRNP40-205ENST00000486941 PUS10Q3MIT2 529 aaKnown RBP10.07□□□□□ -0.8
SNRNP40-205ENST00000486941 SMYD5Q6GMV2 418 aa10.07□□□□□ -0.8
SNRNP40-205ENST00000486941 TMUB1Q9BVT8 246 aa10.07□□□□□ -0.8
SNRNP40-205ENST00000486941 S1PR4O95977 384 aa10.06□□□□□ -0.8
SNRNP40-205ENST00000486941 KMT5BQ4FZB7 885 aa10.06□□□□□ -0.8
SNRNP40-205ENST00000486941 TRIM67Q6ZTA4 783 aa10.06□□□□□ -0.8
SNRNP40-205ENST00000486941 SCUBE3Q8IX30 993 aa10.05□□□□□ -0.8
SNRNP40-205ENST00000486941 DAXXQ9UER7 740 aaPredicted RBP10.04□□□□□ -0.8
SNRNP40-205ENST00000486941 PLA2G2CQ5R387 149 aa10.03□□□□□ -0.8
SNRNP40-205ENST00000486941 LIAT1Q6ZQX7 453 aa10.02□□□□□ -0.81
SNRNP40-205ENST00000486941 NRG2O14511 850 aaPredicted RBP10.01□□□□□ -0.81
SNRNP40-205ENST00000486941 GGCXP38435 758 aa10.01□□□□□ -0.81
SNRNP40-205ENST00000486941 LAPTM4AQ15012 233 aa10.01□□□□□ -0.81
SNRNP40-205ENST00000486941 GPIHBP1Q8IV16 184 aa10.01□□□□□ -0.81
SNRNP40-205ENST00000486941 ADH1BP00325 375 aa10□□□□□ -0.81
SNRNP40-205ENST00000486941 DDX11L8A8MPP1 907 aa9.99□□□□□ -0.81
SNRNP40-205ENST00000486941 SLC19A1P41440 591 aa9.99□□□□□ -0.81
SNRNP40-205ENST00000486941 MORN1Q5T089 497 aa9.99□□□□□ -0.81
SNRNP40-205ENST00000486941 TRAF7Q6Q0C0 670 aa9.99□□□□□ -0.81
SNRNP40-205ENST00000486941 ANKLE1Q8NAG6 615 aa9.99□□□□□ -0.81
SNRNP40-205ENST00000486941 THAP11Q96EK4 314 aa9.99□□□□□ -0.81
SNRNP40-205ENST00000486941 NR1I2O75469 434 aa9.98□□□□□ -0.81
SNRNP40-205ENST00000486941 FUT2Q10981 343 aa9.98□□□□□ -0.81
SNRNP40-205ENST00000486941 SPRYD7Q5W111 196 aa9.98□□□□□ -0.81
SNRNP40-205ENST00000486941 VSIG10Q8N0Z9 540 aa9.98□□□□□ -0.81
SNRNP40-205ENST00000486941 PDZRN3Q9UPQ7 1066 aa9.98□□□□□ -0.81
SNRNP40-205ENST00000486941 GCGRP47871 477 aa9.97□□□□□ -0.81
SNRNP40-205ENST00000486941 RDH13Q8NBN7 331 aa9.96□□□□□ -0.82
SNRNP40-205ENST00000486941 FAM160A2Q8N612 972 aaPredicted RBP9.95□□□□□ -0.82
SNRNP40-205ENST00000486941 SLC6A16Q9GZN6 736 aa9.95□□□□□ -0.82
SNRNP40-205ENST00000486941 SLC27A5Q9Y2P5 690 aa9.95□□□□□ -0.82
SNRNP40-205ENST00000486941 SPSB2Q99619 263 aa9.94□□□□□ -0.82
SNRNP40-205ENST00000486941 ZNF598Q86UK7 904 aaKnown RBP9.93□□□□□ -0.82
SNRNP40-205ENST00000486941 IRF6O14896 467 aa9.92□□□□□ -0.82
SNRNP40-205ENST00000486941 ATP6V1AP38606 617 aa9.92□□□□□ -0.82
SNRNP40-205ENST00000486941 GDF9O60383 454 aa9.91□□□□□ -0.82
SNRNP40-205ENST00000486941 MAP2K5Q13163 448 aa9.91□□□□□ -0.82
SNRNP40-205ENST00000486941 RSPH4AQ5TD94 716 aa9.91□□□□□ -0.82
SNRNP40-205ENST00000486941 BRICD5Q6PL45 260 aa9.9□□□□□ -0.82
SNRNP40-205ENST00000486941 RNF19BQ6ZMZ0 732 aa9.9□□□□□ -0.82
SNRNP40-205ENST00000486941 PRDM9Q9NQV7 894 aa9.9□□□□□ -0.82
SNRNP40-205ENST00000486941 CD46P15529 392 aa9.89□□□□□ -0.83
SNRNP40-205ENST00000486941 ZNF697Q5TEC3 545 aa9.88□□□□□ -0.83
SNRNP40-205ENST00000486941 HLA-CQ95604 372 aa9.88□□□□□ -0.83
SNRNP40-205ENST00000486941 PRR20EP86478 221 aa9.87□□□□□ -0.83
SNRNP40-205ENST00000486941 PRR20CP86479 221 aa9.87□□□□□ -0.83
SNRNP40-205ENST00000486941 PRR20DP86480 221 aa9.87□□□□□ -0.83
SNRNP40-205ENST00000486941 PRR20BP86481 221 aa9.87□□□□□ -0.83
SNRNP40-205ENST00000486941 PRR20AP86496 221 aa9.87□□□□□ -0.83
SNRNP40-205ENST00000486941 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.87□□□□□ -0.83
SNRNP40-205ENST00000486941 SULF1Q8IWU6 871 aa9.87□□□□□ -0.83
SNRNP40-205ENST00000486941 PKD2L1Q9P0L9 805 aa9.87□□□□□ -0.83
SNRNP40-205ENST00000486941 TNFRSF10AO00220 468 aa9.86□□□□□ -0.83
SNRNP40-205ENST00000486941 MDM2Q00987 491 aaPredicted RBP9.86□□□□□ -0.83
SNRNP40-205ENST00000486941 CCDC102AQ96A19 550 aa9.85□□□□□ -0.83
SNRNP40-205ENST00000486941 REPIN1Q9BWE0 567 aaKnown RBP9.85□□□□□ -0.83
SNRNP40-205ENST00000486941 FCF1Q9Y324 198 aaKnown RBP9.85□□□□□ -0.83
SNRNP40-205ENST00000486941 SALL2Q9Y467 1007 aaPredicted RBP9.85□□□□□ -0.83
SNRNP40-205ENST00000486941 MINK1Q8N4C8 1332 aaPredicted RBP9.84□□□□□ -0.83
SNRNP40-205ENST00000486941 MYT1Q01538 1121 aa9.84□□□□□ -0.83
SNRNP40-205ENST00000486941 NISCHQ9Y2I1 1504 aa9.83□□□□□ -0.84
SNRNP40-205ENST00000486941 FMNL1O95466 1100 aaPredicted RBP9.83□□□□□ -0.84
SNRNP40-205ENST00000486941 POTECB2RU33 542 aa9.82□□□□□ -0.84
SNRNP40-205ENST00000486941 KDM4AO75164 1064 aa9.79□□□□□ -0.84
SNRNP40-205ENST00000486941 GUCA2AQ02747 115 aa9.79□□□□□ -0.84
SNRNP40-205ENST00000486941 MSS51Q4VC12 460 aa9.79□□□□□ -0.84
SNRNP40-205ENST00000486941 DGAT1O75907 488 aa9.78□□□□□ -0.84
SNRNP40-205ENST00000486941 RPIAP49247 311 aa9.78□□□□□ -0.84
SNRNP40-205ENST00000486941 FOXC1Q12948 553 aa9.78□□□□□ -0.84
SNRNP40-205ENST00000486941 FAM217BQ9NTX9 383 aaPredicted RBP9.78□□□□□ -0.84
SNRNP40-205ENST00000486941 ZNF787Q6DD87 383 aa9.77□□□□□ -0.85
SNRNP40-205ENST00000486941 FAM187AA6NFU0 413 aa9.76□□□□□ -0.85
SNRNP40-205ENST00000486941 MMP16P51512 607 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms