RNA–Protein interactions for RNA: ENST00000486596.5

NECTIN3-208, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 5

Gene NECTIN3, Length 732 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-208ENST00000486596 TTC37Q6PGP7 1564 aa10.12□□□□□ -0.79
NECTIN3-208ENST00000486596 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.12□□□□□ -0.79
NECTIN3-208ENST00000486596 FANCAO15360 1455 aa10.11□□□□□ -0.79
NECTIN3-208ENST00000486596 DENND4BO75064 1496 aaPredicted RBP10.11□□□□□ -0.79
NECTIN3-208ENST00000486596 LHX6Q9UPM6 363 aa10.11□□□□□ -0.79
NECTIN3-208ENST00000486596 AKNAQ7Z591 1439 aa10.1□□□□□ -0.79
NECTIN3-208ENST00000486596 YEATS2Q9ULM3 1422 aa10.1□□□□□ -0.79
NECTIN3-208ENST00000486596 PLPP6Q8IY26 295 aa10.1□□□□□ -0.79
NECTIN3-208ENST00000486596 ZMYM4Q5VZL5 1548 aa10.1□□□□□ -0.79
NECTIN3-208ENST00000486596 DSG2Q14126 1118 aa10.09□□□□□ -0.79
NECTIN3-208ENST00000486596 CFAP74Q9C0B2 1584 aa10.09□□□□□ -0.79
NECTIN3-208ENST00000486596 CDK13Q14004 1512 aaKnown RBP10.08□□□□□ -0.8
NECTIN3-208ENST00000486596 ZFYVE16Q7Z3T8 1539 aa10.08□□□□□ -0.8
NECTIN3-208ENST00000486596 PLEKHD1A6NEE1 506 aa10.08□□□□□ -0.8
NECTIN3-208ENST00000486596 GTPBP6O43824 516 aaPredicted RBP10.08□□□□□ -0.8
NECTIN3-208ENST00000486596 HSPA2P54652 639 aa10.08□□□□□ -0.8
NECTIN3-208ENST00000486596 PBX2P40425 430 aa10.07□□□□□ -0.8
NECTIN3-208ENST00000486596 HECW1Q76N89 1606 aa10.07□□□□□ -0.8
NECTIN3-208ENST00000486596 EFCAB5A4FU69 1503 aa10.07□□□□□ -0.8
NECTIN3-208ENST00000486596 PTGER2P43116 358 aa10.06□□□□□ -0.8
NECTIN3-208ENST00000486596 POTEEQ6S8J3 1075 aa10.06□□□□□ -0.8
NECTIN3-208ENST00000486596 CRISPLD2Q9H0B8 497 aa10.06□□□□□ -0.8
NECTIN3-208ENST00000486596 EEA1Q15075 1411 aa10.06□□□□□ -0.8
NECTIN3-208ENST00000486596 PSDA5PKW4 1024 aaPredicted RBP10.05□□□□□ -0.8
NECTIN3-208ENST00000486596 POGZQ7Z3K3 1410 aa10.05□□□□□ -0.8
NECTIN3-208ENST00000486596 LSM11P83369 360 aaKnown RBP eCLIP10.04□□□□□ -0.8
NECTIN3-208ENST00000486596 BBXQ8WY36 941 aaPredicted RBP10.04□□□□□ -0.8
NECTIN3-208ENST00000486596 RNF166Q96A37 237 aaPredicted RBP10.04□□□□□ -0.8
NECTIN3-208ENST00000486596 MYT1LQ9UL68 1186 aa10.04□□□□□ -0.8
NECTIN3-208ENST00000486596 MAGI2Q86UL8 1455 aa10.04□□□□□ -0.8
NECTIN3-208ENST00000486596 PLCH2O75038 1416 aa10.03□□□□□ -0.8
NECTIN3-208ENST00000486596 MLECQ14165 292 aa10.03□□□□□ -0.8
NECTIN3-208ENST00000486596 SCAPERQ9BY12 1400 aa10.03□□□□□ -0.8
NECTIN3-208ENST00000486596 FER1L4A9Z1Z3 1794 aa10.03□□□□□ -0.8
NECTIN3-208ENST00000486596 ANKRD13DQ6ZTN6 518 aa10.02□□□□□ -0.81
NECTIN3-208ENST00000486596 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.02□□□□□ -0.81
NECTIN3-208ENST00000486596 ARHGEF12Q9NZN5 1544 aa10.02□□□□□ -0.81
NECTIN3-208ENST00000486596 TBC1D12O60347 775 aa10.01□□□□□ -0.81
NECTIN3-208ENST00000486596 OXER1Q8TDS5 423 aa10□□□□□ -0.81
NECTIN3-208ENST00000486596 NCKAP5LQ9HCH0 1330 aa10□□□□□ -0.81
NECTIN3-208ENST00000486596 KIF14Q15058 1648 aa10□□□□□ -0.81
NECTIN3-208ENST00000486596 C9orf84Q5VXU9 1444 aa9.99□□□□□ -0.81
NECTIN3-208ENST00000486596 ATP10AO60312 1499 aa9.99□□□□□ -0.81
NECTIN3-208ENST00000486596 MYO5CQ9NQX4 1742 aa9.99□□□□□ -0.81
NECTIN3-208ENST00000486596 PDE4AP27815 886 aa9.98□□□□□ -0.81
NECTIN3-208ENST00000486596 CERKQ8TCT0 537 aa9.98□□□□□ -0.81
NECTIN3-208ENST00000486596 CFAP44Q96MT7 982 aa9.98□□□□□ -0.81
NECTIN3-208ENST00000486596 AXIN2Q9Y2T1 843 aa9.98□□□□□ -0.81
NECTIN3-208ENST00000486596 PREX1Q8TCU6 1659 aa9.98□□□□□ -0.81
NECTIN3-208ENST00000486596 ARHGAP35Q9NRY4 1499 aa9.98□□□□□ -0.81
NECTIN3-208ENST00000486596 ARHGAP33O14559 1287 aa9.97□□□□□ -0.81
NECTIN3-208ENST00000486596 CEBPAP49715 358 aaPredicted RBP9.97□□□□□ -0.81
NECTIN3-208ENST00000486596 PPP1R15BQ5SWA1 713 aa9.97□□□□□ -0.81
NECTIN3-208ENST00000486596 KDM5CP41229 1560 aa9.97□□□□□ -0.81
NECTIN3-208ENST00000486596 SPRYD3Q8NCJ5 442 aa9.96□□□□□ -0.82
NECTIN3-208ENST00000486596 FMN1Q68DA7 1419 aa9.96□□□□□ -0.82
NECTIN3-208ENST00000486596 ZNF518AQ6AHZ1 1483 aa9.96□□□□□ -0.82
NECTIN3-208ENST00000486596 DIP2CQ9Y2E4 1556 aa9.96□□□□□ -0.82
NECTIN3-208ENST00000486596 EFCAB2Q5VUJ9 269 aa9.95□□□□□ -0.82
NECTIN3-208ENST00000486596 PAXIP1Q6ZW49 1069 aaPredicted RBP9.95□□□□□ -0.82
NECTIN3-208ENST00000486596 ATP1B4Q9UN42 357 aaPredicted RBP9.95□□□□□ -0.82
NECTIN3-208ENST00000486596 ARHGAP5Q13017 1502 aa9.95□□□□□ -0.82
NECTIN3-208ENST00000486596 LRRIQ1Q96JM4 1722 aa9.95□□□□□ -0.82
NECTIN3-208ENST00000486596 STRCQ7RTU9 1775 aa9.94□□□□□ -0.82
NECTIN3-208ENST00000486596 ABCA6Q8N139 1617 aa9.94□□□□□ -0.82
NECTIN3-208ENST00000486596 TROQ12816 1431 aaPredicted RBP9.94□□□□□ -0.82
NECTIN3-208ENST00000486596 AFAP1Q8N556 730 aa9.94□□□□□ -0.82
NECTIN3-208ENST00000486596 PPP4R3BQ5MIZ7 849 aa9.93□□□□□ -0.82
NECTIN3-208ENST00000486596 REREQ9P2R6 1566 aa9.92□□□□□ -0.82
NECTIN3-208ENST00000486596 UHRF1BP1Q6BDS2 1440 aa9.92□□□□□ -0.82
NECTIN3-208ENST00000486596 UBTFP17480 764 aaKnown RBP9.92□□□□□ -0.82
NECTIN3-208ENST00000486596 MFSD10Q14728 455 aa9.92□□□□□ -0.82
NECTIN3-208ENST00000486596 ABCC1P33527 1531 aa9.92□□□□□ -0.82
NECTIN3-208ENST00000486596 CDC42BPBQ9Y5S2 1711 aa9.91□□□□□ -0.82
NECTIN3-208ENST00000486596 TK2O00142 265 aa9.91□□□□□ -0.82
NECTIN3-208ENST00000486596 ADGRD1Q6QNK2 874 aa9.91□□□□□ -0.82
NECTIN3-208ENST00000486596 LARP6Q9BRS8 491 aaKnown RBP9.91□□□□□ -0.82
NECTIN3-208ENST00000486596 MLH3Q9UHC1 1453 aa9.91□□□□□ -0.82
NECTIN3-208ENST00000486596 CLIP1P30622 1438 aa9.9□□□□□ -0.82
NECTIN3-208ENST00000486596 TRAPPC8Q9Y2L5 1435 aa9.9□□□□□ -0.82
NECTIN3-208ENST00000486596 C3P01024 1663 aa9.9□□□□□ -0.82
NECTIN3-208ENST00000486596 PREX2Q70Z35 1606 aa9.9□□□□□ -0.82
NECTIN3-208ENST00000486596 UPF1Q92900 1129 aaKnown RBP eCLIP9.9□□□□□ -0.82
NECTIN3-208ENST00000486596 ANO8Q9HCE9 1232 aaPredicted RBP9.9□□□□□ -0.82
NECTIN3-208ENST00000486596 CDK11AQ9UQ88 783 aaPredicted RBP9.9□□□□□ -0.82
NECTIN3-208ENST00000486596 AGLP35573 1532 aa9.89□□□□□ -0.83
NECTIN3-208ENST00000486596 CADPS2Q86UW7 1296 aa9.89□□□□□ -0.83
NECTIN3-208ENST00000486596 DDX27Q96GQ7 796 aaKnown RBP9.89□□□□□ -0.83
NECTIN3-208ENST00000486596 ITSN2Q9NZM3 1697 aa9.89□□□□□ -0.83
NECTIN3-208ENST00000486596 PSEN2P49810 448 aa9.88□□□□□ -0.83
NECTIN3-208ENST00000486596 DMRTA1Q5VZB9 504 aa9.88□□□□□ -0.83
NECTIN3-208ENST00000486596 ILDR2Q71H61 639 aa9.88□□□□□ -0.83
NECTIN3-208ENST00000486596 HRO43593 1189 aa9.87□□□□□ -0.83
NECTIN3-208ENST00000486596 KIDINS220Q9ULH0 1771 aa9.87□□□□□ -0.83
NECTIN3-208ENST00000486596 DISP3Q9P2K9 1392 aa9.87□□□□□ -0.83
NECTIN3-208ENST00000486596 LTBP4Q8N2S1 1624 aa9.86□□□□□ -0.83
NECTIN3-208ENST00000486596 PTPRTO14522 1441 aa9.86□□□□□ -0.83
NECTIN3-208ENST00000486596 CCDC18Q5T9S5 1454 aa9.85□□□□□ -0.83
NECTIN3-208ENST00000486596 NCOA1Q15788 1441 aa9.85□□□□□ -0.83
NECTIN3-208ENST00000486596 CASKIN1Q8WXD9 1431 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms