RNA–Protein interactions for RNA: ENST00000486464.1

TSC22D1-206, Transcript of TSC22 domain family member 1, humanhuman

TSL 5

Gene TSC22D1, Length 1,093 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D1-206ENST00000486464 SIGLEC1Q9BZZ2 1709 aa12.11□□□□□ -0.47
TSC22D1-206ENST00000486464 CDC42BPBQ9Y5S2 1711 aa12.11□□□□□ -0.47
TSC22D1-206ENST00000486464 C9orf84Q5VXU9 1444 aa12.11□□□□□ -0.47
TSC22D1-206ENST00000486464 ZNF777Q9ULD5 760 aaPredicted RBP12.1□□□□□ -0.47
TSC22D1-206ENST00000486464 FYCO1Q9BQS8 1478 aa12.08□□□□□ -0.47
TSC22D1-206ENST00000486464 PREX2Q70Z35 1606 aa12.08□□□□□ -0.48
TSC22D1-206ENST00000486464 ZNF710Q8N1W2 664 aa12.08□□□□□ -0.48
TSC22D1-206ENST00000486464 HSPA2P54652 639 aa12.07□□□□□ -0.48
TSC22D1-206ENST00000486464 LMTK3Q96Q04 1460 aa12.07□□□□□ -0.48
TSC22D1-206ENST00000486464 HOXB1P14653 301 aaPredicted RBP12.06□□□□□ -0.48
TSC22D1-206ENST00000486464 ESF1Q9H501 851 aaKnown RBP12.06□□□□□ -0.48
TSC22D1-206ENST00000486464 CDC42BPAQ5VT25 1732 aa12.06□□□□□ -0.48
TSC22D1-206ENST00000486464 KDM5CP41229 1560 aa12.05□□□□□ -0.48
TSC22D1-206ENST00000486464 CEBPAP49715 358 aaPredicted RBP12.05□□□□□ -0.48
TSC22D1-206ENST00000486464 ITSN2Q9NZM3 1697 aa12.04□□□□□ -0.48
TSC22D1-206ENST00000486464 FAM205CA6NFA0 338 aa12.04□□□□□ -0.48
TSC22D1-206ENST00000486464 ABCC1P33527 1531 aa12.04□□□□□ -0.48
TSC22D1-206ENST00000486464 TRAPPC8Q9Y2L5 1435 aa12.03□□□□□ -0.48
TSC22D1-206ENST00000486464 ARHGEF12Q9NZN5 1544 aa12.03□□□□□ -0.48
TSC22D1-206ENST00000486464 POTEB3A0JP26 581 aa12.03□□□□□ -0.48
TSC22D1-206ENST00000486464 RIMBP2O15034 1052 aa12.03□□□□□ -0.48
TSC22D1-206ENST00000486464 POTEBQ6S5H4 581 aa12.03□□□□□ -0.48
TSC22D1-206ENST00000486464 HS3ST6Q96QI5 342 aa12.03□□□□□ -0.48
TSC22D1-206ENST00000486464 DIP2CQ9Y2E4 1556 aa12.03□□□□□ -0.48
TSC22D1-206ENST00000486464 MTUS2Q5JR59 1369 aa12.03□□□□□ -0.48
TSC22D1-206ENST00000486464 ABCA6Q8N139 1617 aa12.02□□□□□ -0.49
TSC22D1-206ENST00000486464 CFDP1Q9UEE9 299 aaPredicted RBP12.02□□□□□ -0.49
TSC22D1-206ENST00000486464 CCNB3Q8WWL7 1395 aa12.02□□□□□ -0.49
TSC22D1-206ENST00000486464 MLH3Q9UHC1 1453 aa12.02□□□□□ -0.49
TSC22D1-206ENST00000486464 HNRNPMP52272 730 aaKnown RBP eCLIP12.01□□□□□ -0.494e-6■■□□□ 13.5
TSC22D1-206ENST00000486464 FBXO41Q8TF61 875 aa12.01□□□□□ -0.49
TSC22D1-206ENST00000486464 HS6ST3Q8IZP7 471 aa12□□□□□ -0.49
TSC22D1-206ENST00000486464 ZSWIM6Q9HCJ5 1215 aa12□□□□□ -0.49
TSC22D1-206ENST00000486464 PREX1Q8TCU6 1659 aa12□□□□□ -0.49
TSC22D1-206ENST00000486464 SPAG9O60271 1321 aaKnown RBP11.99□□□□□ -0.49
TSC22D1-206ENST00000486464 SYCP2Q9BX26 1530 aa11.99□□□□□ -0.49
TSC22D1-206ENST00000486464 GPATCH8Q9UKJ3 1502 aaKnown RBP11.99□□□□□ -0.49
TSC22D1-206ENST00000486464 SAMD9LQ8IVG5 1584 aa11.99□□□□□ -0.49
TSC22D1-206ENST00000486464 KIDINS220Q9ULH0 1771 aa11.98□□□□□ -0.49
TSC22D1-206ENST00000486464 REREQ9P2R6 1566 aa11.98□□□□□ -0.49
TSC22D1-206ENST00000486464 CEP162Q5TB80 1403 aa11.97□□□□□ -0.49
TSC22D1-206ENST00000486464 UHRF1BP1Q6BDS2 1440 aa11.96□□□□□ -0.49
TSC22D1-206ENST00000486464 KIF3CO14782 793 aa11.96□□□□□ -0.49
TSC22D1-206ENST00000486464 SUPT6HQ7KZ85 1726 aaKnown RBP11.96□□□□□ -0.49
TSC22D1-206ENST00000486464 AGLP35573 1532 aa11.96□□□□□ -0.5
TSC22D1-206ENST00000486464 PLEKHH2Q8IVE3 1493 aa11.95□□□□□ -0.5
TSC22D1-206ENST00000486464 C3P01024 1663 aa11.95□□□□□ -0.5
TSC22D1-206ENST00000486464 PPP1R37O75864 691 aa11.95□□□□□ -0.5
TSC22D1-206ENST00000486464 GPR153Q6NV75 609 aa11.95□□□□□ -0.5
TSC22D1-206ENST00000486464 ERBB3P21860 1342 aa11.94□□□□□ -0.5
TSC22D1-206ENST00000486464 C2orf72A6NCS6 295 aa11.94□□□□□ -0.5
TSC22D1-206ENST00000486464 EHBP1L1Q8N3D4 1523 aa11.94□□□□□ -0.5
TSC22D1-206ENST00000486464 ATP7AQ04656 1500 aa11.93□□□□□ -0.5
TSC22D1-206ENST00000486464 SETD1BQ9UPS6 1966 aaKnown RBP11.93□□□□□ -0.5
TSC22D1-206ENST00000486464 CHGAP10645 457 aaKnown RBP11.93□□□□□ -0.5
TSC22D1-206ENST00000486464 SPNS2Q8IVW8 549 aa11.93□□□□□ -0.5
TSC22D1-206ENST00000486464 KRTAP3-3Q9BYR6 98 aa11.93□□□□□ -0.5
TSC22D1-206ENST00000486464 KRTAP3-2Q9BYR7 98 aa11.93□□□□□ -0.5
TSC22D1-206ENST00000486464 CNTLNQ9NXG0 1405 aa11.93□□□□□ -0.5
TSC22D1-206ENST00000486464 KIAA1107Q9UPP5 1409 aa11.93□□□□□ -0.5
TSC22D1-206ENST00000486464 ZNF644Q9H582 1327 aaPredicted RBP11.92□□□□□ -0.5
TSC22D1-206ENST00000486464 GGT6Q6P531 493 aa11.92□□□□□ -0.5
TSC22D1-206ENST00000486464 TIAM1Q13009 1591 aa11.92□□□□□ -0.5
TSC22D1-206ENST00000486464 LOC105371045A0A1W2PR82 267 aa11.91□□□□□ -0.5
TSC22D1-206ENST00000486464 CERKQ8TCT0 537 aa11.91□□□□□ -0.5
TSC22D1-206ENST00000486464 A2MP01023 1474 aa11.9□□□□□ -0.5
TSC22D1-206ENST00000486464 INO80Q9ULG1 1556 aaPredicted RBP11.89□□□□□ -0.51
TSC22D1-206ENST00000486464 CLTCQ00610 1675 aaKnown RBP11.89□□□□□ -0.51
TSC22D1-206ENST00000486464 ZMYM3Q14202 1370 aa11.89□□□□□ -0.51
TSC22D1-206ENST00000486464 ADGBQ8N7X0 1667 aa11.88□□□□□ -0.51
TSC22D1-206ENST00000486464 STRCQ7RTU9 1775 aa11.88□□□□□ -0.51
TSC22D1-206ENST00000486464 ARSIQ5FYB1 569 aa11.88□□□□□ -0.51
TSC22D1-206ENST00000486464 TMC2Q8TDI7 906 aa11.88□□□□□ -0.51
TSC22D1-206ENST00000486464 MROH2AA6NES4 1674 aa11.87□□□□□ -0.51
TSC22D1-206ENST00000486464 MMRN1Q13201 1228 aa11.87□□□□□ -0.51
TSC22D1-206ENST00000486464 VARS2Q5ST30 1063 aaKnown RBP11.87□□□□□ -0.51
TSC22D1-206ENST00000486464 NCOA2Q15596 1464 aa11.86□□□□□ -0.51
TSC22D1-206ENST00000486464 NPATQ14207 1427 aa11.85□□□□□ -0.51
TSC22D1-206ENST00000486464 PLXNC1O60486 1568 aa11.84□□□□□ -0.51
TSC22D1-206ENST00000486464 CAMSAP2Q08AD1 1489 aa11.84□□□□□ -0.51
TSC22D1-206ENST00000486464 MBD5Q9P267 1494 aa11.84□□□□□ -0.51
TSC22D1-206ENST00000486464 KIF3BO15066 747 aa11.84□□□□□ -0.51
TSC22D1-206ENST00000486464 TSPY4P0CV99 314 aa11.84□□□□□ -0.51
TSC22D1-206ENST00000486464 TSPY10P0CW01 314 aa11.84□□□□□ -0.51
TSC22D1-206ENST00000486464 NKX1-1Q15270 411 aaPredicted RBP11.84□□□□□ -0.51
TSC22D1-206ENST00000486464 RSPH4AQ5TD94 716 aa11.84□□□□□ -0.51
TSC22D1-206ENST00000486464 RTEL1-TNFRSF6BF6WH68 1400 aa11.84□□□□□ -0.51
TSC22D1-206ENST00000486464 KHSRPQ92945 711 aaKnown RBP eCLIP11.83□□□□□ -0.52
TSC22D1-206ENST00000486464 VPS8Q8N3P4 1428 aa11.83□□□□□ -0.52
TSC22D1-206ENST00000486464 CCDC141Q6ZP82 1450 aa11.83□□□□□ -0.52
TSC22D1-206ENST00000486464 CAMSAP1Q5T5Y3 1602 aa11.82□□□□□ -0.52
TSC22D1-206ENST00000486464 DHX29Q7Z478 1369 aaKnown RBP11.82□□□□□ -0.52
TSC22D1-206ENST00000486464 SLC34A2O95436 690 aa11.82□□□□□ -0.52
TSC22D1-206ENST00000486464 PTPRTO14522 1441 aa11.82□□□□□ -0.52
TSC22D1-206ENST00000486464 ZNF687Q8N1G0 1237 aa11.81□□□□□ -0.52
TSC22D1-206ENST00000486464 LRRC9Q6ZRR7 1453 aa11.81□□□□□ -0.52
TSC22D1-206ENST00000486464 NCKAP5LQ9HCH0 1330 aa11.81□□□□□ -0.52
TSC22D1-206ENST00000486464 NCOA1Q15788 1441 aa11.8□□□□□ -0.52
TSC22D1-206ENST00000486464 MYO3AQ8NEV4 1616 aa11.8□□□□□ -0.52
TSC22D1-206ENST00000486464 WASHC2CQ9Y4E1 1318 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms